Services
Research
Training
Industry
About us
ChEBI
Examples:
iron*
,
InChI=1S/CH4O/c1-2/h2H,1H3
,
caffeine
Advanced
Home
Advanced Search
Browse
Documentation
Download
Tools
About ChEBI
Submit
Contact us
DiNA
Statistics
Entity of the Month
Periodic Table
Ontology
Train online
User Manual
Annotation Manual
Developer Manual
FAQ's
BiNChE
libChEBI
Web Services
ChEBI
> Main
CHEBI:16964 - 5-hydroxymethyluracil
Main
ChEBI Ontology
Automatic Xrefs
Reactions
Pathways
Models
ChEBI Name
5-hydroxymethyluracil
ChEBI ID
CHEBI:16964
Definition
A primary alcohol that is uracil bearing a hydroxymethyl substituent at the 5-position.
Stars
This entity has been manually annotated by the ChEBI Team.
Secondary ChEBI IDs
CHEBI:43267, CHEBI:2079, CHEBI:12139, CHEBI:20591
Supplier Information
Download
Molfile
XML
SDF
Find compounds which contain this structure
Find compounds which resemble this structure
Take structure to the Advanced Search
more structures >>
Molfile
expand
Formula
C5H6N2O3
Net Charge
0
Average Mass
142.11282
Monoisotopic Mass
142.03784
InChI
InChI=1S/C5H6N2O3/c8-2-3-1-6-5(10)7-4(3)9/h1,8H,2H2,(H2,6,7,9,10)
InChIKey
JDBGXEHEIRGOBU-UHFFFAOYSA-N
SMILES
OCc1c[nH]c(=O)[nH]c1=O
Roles Classification
Biological Role
(s):
human metabolite
Any mammalian metabolite produced during a metabolic reaction in humans (
Homo sapiens
).
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
5-hydroxymethyluracil (
CHEBI:16964
)
has functional parent
uracil (
CHEBI:17568
)
5-hydroxymethyluracil (
CHEBI:16964
)
has role
human metabolite (
CHEBI:77746
)
5-hydroxymethyluracil (
CHEBI:16964
)
is a
primary alcohol (
CHEBI:15734
)
5-hydroxymethyluracil (
CHEBI:16964
)
is a
pyrimidone (
CHEBI:38337
)
Incoming
(β-
D
-glucopyranosyloxymethyl)deoxyuridine (
CHEBI:111513
)
has functional parent
5-hydroxymethyluracil (
CHEBI:16964
)
(β-
D
-glucopyranosyloxymethyl)deoxyuridine 5'-monophosphate (
CHEBI:111511
)
has functional parent
5-hydroxymethyluracil (
CHEBI:16964
)
5-formyluracil (
CHEBI:80961
)
has functional parent
5-hydroxymethyluracil (
CHEBI:16964
)
5-hydroxymethyl-2'-deoxyuridine (
CHEBI:61288
)
has functional parent
5-hydroxymethyluracil (
CHEBI:16964
)
IUPAC Name
5-(hydroxymethyl)pyrimidine-2,4(1
H
,3
H
)-dione
Synonyms
Sources
5-(hydroxymethyl)-2,4(1
H
,3
H
)-pyrimidinedione
ChemIDplus
5-(hydroxymethyl)uracil
ChemIDplus
5-HYDROXYMETHYL URACIL
PDBeChem
5-Hydroxymethyluracil
KEGG COMPOUND
5-hydroxymethyluracil
UniProt
Manual Xrefs
Databases
C03088
KEGG COMPOUND
CPD-254
MetaCyc
HMDB0000469
HMDB
HMU
PDBeChem
View more database links
Registry Numbers
Types
Sources
125482
Beilstein Registry Number
Beilstein
125482
Reaxys Registry Number
Reaxys
4433-40-3
CAS Registry Number
KEGG COMPOUND
4433-40-3
CAS Registry Number
ChemIDplus
Citations
Types
Sources
11275423
PubMed citation
Europe PMC
12361800
PubMed citation
Europe PMC
15649624
PubMed citation
Europe PMC
1807452
PubMed citation
Europe PMC
3904829
PubMed citation
Europe PMC
9639392
PubMed citation
Europe PMC
9671541
PubMed citation
Europe PMC
Last Modified
11 January 2019