CHEBI:78591 - pederin

Main ChEBI Ontology Automatic Xrefs Reactions Pathways Models
ChEBI Name pederin
ChEBI ID CHEBI:78591
Definition A polyketide and carboxamide produced by a (Pseudomonas) bacterial endosymbiont of certain rove beetles (genus Paederus). Pederin is the agent responsible for the vesicant effects (linear or Paederus dermatitis) when the beetle is crushed against the skin. It is a powerful inhibitor of protein biosynthesis and mitosis and a potent antitumour agent.
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information
Download Molfile XML SDF
Wikipedia License
Waiting for wikipedia content
Read full article at Wikipedia
Formula C25H45NO9
Net Charge 0
Average Mass 503.62610
Monoisotopic Mass 503.30943
InChI InChI=1S/C25H45NO9/c1-14-12-25(33-9,35-16(3)15(14)2)21(28)22(29)26-23(32-8)18-11-19(27)24(4,5)20(34-18)10-17(31-7)13-30-6/h15-21,23,27-28H,1,10-13H2,2-9H3,(H,26,29)/t15-,16-,17+,18+,19-,20-,21-,23+,25-/m1/s1
InChIKey ZNEZZONMADKYTB-VRCUBXEUSA-N
SMILES COC[C@H](C[C@H]1O[C@@H](C[C@@H](O)C1(C)C)[C@@H](NC(=O)[C@@H](O)[C@]1(CC(=C)[C@@H](C)[C@@H](C)O1)OC)OC)OC
Roles Classification
Biological Role(s): bacterial metabolite
Any prokaryotic metabolite produced during a metabolic reaction in bacteria.
vesicant
Any compound that causes severe skin, eye and mucosal pain and irritation.
antimitotic
Any compound that inhibits cell division (mitosis).
Application(s): antineoplastic agent
A substance that inhibits or prevents the proliferation of neoplasms.
View more via ChEBI Ontology
ChEBI Ontology
Outgoing pederin (CHEBI:78591) has role antimitotic (CHEBI:64911)
pederin (CHEBI:78591) has role antineoplastic agent (CHEBI:35610)
pederin (CHEBI:78591) has role bacterial metabolite (CHEBI:76969)
pederin (CHEBI:78591) has role vesicant (CHEBI:78592)
pederin (CHEBI:78591) is a cyclic ketal (CHEBI:59779)
pederin (CHEBI:78591) is a diol (CHEBI:23824)
pederin (CHEBI:78591) is a oxanes (CHEBI:46942)
pederin (CHEBI:78591) is a polyketide (CHEBI:26188)
pederin (CHEBI:78591) is a secondary alcohol (CHEBI:35681)
pederin (CHEBI:78591) is a secondary carboxamide (CHEBI:140325)
IUPAC Name
(2S)-N-[(S)-{(2S,4R,6R)-6-[(2S)-2,3-dimethoxypropyl]-4-hydroxy-5,5-dimethyltetrahydro-2H-pyran-2-yl}(methoxy)methyl]-2-hydroxy-2-[(2R,5R,6R)-2-methoxy-5,6-dimethyl-4-methylenetetrahydro-2H-pyran-2-yl]acetamide
Synonyms Sources
(+)-pederin ChEBI
(+)-pederine ChEBI
paederine ChEBI
pederine ChemIDplus
Manual Xrefs Databases
C15760 KEGG COMPOUND
Pederin Wikipedia
US7771972 Patent
View more database links
Registry Numbers Types Sources
27973-72-4 CAS Registry Number KEGG COMPOUND
27973-72-4 CAS Registry Number ChemIDplus
3598743 Reaxys Registry Number Reaxys
Citations Waiting for Citations Types Sources
11077605 PubMed citation Europe PMC
11166312 PubMed citation Europe PMC
11886773 PubMed citation Europe PMC
12057588 PubMed citation Europe PMC
12381784 PubMed citation Europe PMC
14695518 PubMed citation Europe PMC
17645272 PubMed citation Europe PMC
19206228 PubMed citation Europe PMC
21268211 PubMed citation Europe PMC
21426381 PubMed citation Europe PMC
21902245 PubMed citation Europe PMC
22444588 PubMed citation Europe PMC
22772477 PubMed citation Europe PMC
23581998 PubMed citation Europe PMC
23898213 PubMed citation Europe PMC
3295241 PubMed citation Europe PMC
5959934 PubMed citation Europe PMC
Last Modified
07 March 2018