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ChEBI
> Main
CHEBI:90941 - sibiromycin
Main
ChEBI Ontology
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ChEBI Name
sibiromycin
ChEBI ID
CHEBI:90941
Definition
An aminoglycoside antibiotic produced by
Streptosporangium sibiricum
that also exhibits antitumour properties.
Stars
This entity has been manually annotated by the ChEBI Team.
Submitter
Kristian Axelsen
Supplier Information
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Molfile
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Formula
C24H33N3O7
Net Charge
0
Average Mass
475.536
Monoisotopic Mass
475.23185
InChI
InChI=1S/C24H33N3O7/c1-
6-
7-
13-
8-
15-
21(30)
26-
17-
14(22(31)
27(15)
10-
13)
9-
16(11(2)
18(17)
28)
34-
23-
20(29)
24(4,32)
19(25-
5)
12(3)
33-
23/h6-
7,9-
10,12,15,19-
21,23,25-
26,28-
30,32H,8H2,1-
5H3/b7-
6+/t12-
,15-
,19-
,20-
,21+,23-
,24+/m0/s1
InChIKey
RAGFPHFDFVNLCG-INYQBOQCSA-N
SMILES
OC1=C2N[C@@H]
([C@]
3(N(C=C(/C=C/C)
C3)
C(=O)
C2=CC(=C1C)
O[C@H]
4[C@@H]
([C@]
([C@H]
([C@@H]
(O4)
C)
NC)
(C)
O)
O)
[H]
)
O
Metabolite of Species
Details
Streptosporangium sibiricum
(NCBI:txid457432)
See:
PubMed
Roles Classification
Chemical Role
(s):
Bronsted base
A molecular entity capable of accepting a hydron from a donor (Br
o
nsted acid).
(via
organic amino compound
)
Biological Role
(s):
bacterial metabolite
Any prokaryotic metabolite produced during a metabolic reaction in bacteria.
antimicrobial agent
A substance that kills or slows the growth of microorganisms, including bacteria, viruses, fungi and protozoans.
(via
carbohydrate-containing antibiotic
)
Application
(s):
antineoplastic agent
A substance that inhibits or prevents the proliferation of neoplasms.
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
sibiromycin (
CHEBI:90941
)
has role
antineoplastic agent (
CHEBI:35610
)
sibiromycin (
CHEBI:90941
)
has role
bacterial metabolite (
CHEBI:76969
)
sibiromycin (
CHEBI:90941
)
is a
aminoglycoside antibiotic (
CHEBI:22507
)
sibiromycin (
CHEBI:90941
)
is a
hemiaminal (
CHEBI:73080
)
sibiromycin (
CHEBI:90941
)
is a
phenols (
CHEBI:33853
)
sibiromycin (
CHEBI:90941
)
is a
pyrrolobenzodiazepine (
CHEBI:131437
)
IUPAC Name
(11
R
,11a
S
)-
9,11-
dihydroxy-
8-
methyl-
5-
oxo-
2-
[(1
E
)-
prop-
1-
en-
1-
yl]-
5,10,11,11a-
tetrahydro-
1
H
-
pyrrolo[2,1-
][1,4]benzodiazepin-
7-
yl 4,6-
dideoxy-
3-
C
-
methyl-
4-
(methylamino)-
α-
L
-
mannopyranoside
Synonym
Source
Sybiromycin
ChemIDplus
Manual Xrefs
Databases
C00018852
KNApSAcK
CPD-18442
MetaCyc
View more database links
Registry Numbers
Types
Sources
12684-33-2
CAS Registry Number
KNApSAcK
12684-33-2
CAS Registry Number
ChemIDplus
14751112
Reaxys Registry Number
Reaxys
Citations
Types
Sources
1119795
PubMed citation
Europe PMC
18983
PubMed citation
Europe PMC
20544978
PubMed citation
Europe PMC
21111423
PubMed citation
Europe PMC
21612226
PubMed citation
Europe PMC
25111266
PubMed citation
Europe PMC
25564379
PubMed citation
SUBMITTER
25960001
PubMed citation
Europe PMC
358909
PubMed citation
Europe PMC
581439
PubMed citation
Europe PMC
582800
PubMed citation
Europe PMC
6376603
PubMed citation
Europe PMC
6987949
PubMed citation
Europe PMC
Last Modified
03 March 2016