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InChI=1S/CH4O/c1-2/h2H,1H3
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ChEBI
> Main
CHEBI:52718 - Cy7 dye
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ChEBI Name
Cy7 dye
ChEBI ID
CHEBI:52718
Definition
A C7-cyanine dye having differentially-substituted 2-indolyl units at each end.
Stars
This entity has been manually annotated by the ChEBI Team.
Supplier Information
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Molfile
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Molfile
Formula
C31H34N2O8S2
Net Charge
0
Average Mass
626.74000
Monoisotopic Mass
626.17566
InChI
InChI=1S/C31H34N2O8S2/c1-
2-
32-
25(19-
23-
21-
27(42(36,37)
38)
14-
16-
29(23)
32)
11-
7-
4-
3-
5-
8-
12-
26-
20-
24-
22-
28(43(39,40)
41)
15-
17-
30(24)
33(26)
18-
10-
6-
9-
13-
31(34)
35/h3-
5,7-
8,11-
12,14-
17,21-
22H,2,6,9-
10,13,18-
20H2,1H3,(H2-
,34,35,36,37,38,39,40,41)
InChIKey
LOPCOKFMJOYXHI-UHFFFAOYSA-N
SMILES
[H]
C(=CC([H]
)
=CC([H]
)
=C1Cc2cc(ccc2N1CC)
S(O)
(=O)
=O)
C=C([H]
)
C1=[N+]
(CCCCCC(O)
=O)
c2ccc(cc2C1)
S([O-
]
)
(=O)
=O
Roles Classification
Application
(s):
fluorochrome
A fluorescent dye used to stain biological specimens.
dye
(via
cyanine dye
)
View more via ChEBI Ontology
ChEBI Ontology
Outgoing
Cy7 dye (
CHEBI:52718
)
has functional parent
C7-indocyanine (
CHEBI:51901
)
Cy7 dye (
CHEBI:52718
)
has role
fluorochrome (
CHEBI:51217
)
Cy7 dye (
CHEBI:52718
)
is a
cyanine dye (
CHEBI:37960
)
IUPAC Names
1-
(5-
carboxypentyl)-
2-
[7-
(1-
ethyl-
5-
sulfo-
1,3-
dihydro-
2
H
-
indol-
2-
ylidene)hepta-
1,3,5-
trien-
1-
yl]-
3
H
-
indolium-
5-
sulfonate
2-
{7-
[1-
(5-
carboxypentyl)-
5-
sulfo-
1,3-
dihydro-
2
H
-
indol-
2-
ylidene]hepta-
1,3,5-
trien-
1-
yl}-
1-
ethyl-
3
H
-
indolium-
5-
sulfonate
Last Modified
22 July 2009