CHEBI:60393 - α-Kdo-(2→8)-[α-Kdo-(2→4)]-α-Kdo

Main ChEBI Ontology Automatic Xrefs Reactions Pathways Models
ChEBI Name α-Kdo-(2→8)-[α-Kdo-(2→4)]-α-Kdo
ChEBI ID CHEBI:60393
ChEBI ASCII Name alpha-Kdo-(2->8)-[alpha-Kdo-(2->4)]-alpha-Kdo
Definition A trisaccharide consisting of three 3-deoxy-α-D-manno-oct-2-ulopyranonosyl units in a branched sequence.
Stars This entity has been manually annotated by the ChEBI Team.
Supplier Information
Download Molfile XML SDF
Formula C24H38O22
Net Charge 0
Average Mass 678.54530
Monoisotopic Mass 678.18547
InChI InChI=1S/C24H38O22/c25-4-9(29)16-13(32)7(27)1-23(45-16,20(37)38)42-6-11(31)18-15(34)12(3-22(41,44-18)19(35)36)43-24(21(39)40)2-8(28)14(33)17(46-24)10(30)5-26/h7-18,25-34,41H,1-6H2,(H,35,36)(H,37,38)(H,39,40)/t7-,8-,9-,10-,11-,12-,13-,14-,15-,16-,17-,18-,22-,23-,24-/m1/s1
InChIKey ODUXWSZMWJAAPV-VGCKMWDQSA-N
SMILES [H][C@@]1(O[C@@](C[C@@H](O)[C@H]1O)(OC[C@@H](O)[C@@]1([H])O[C@](O)(C[C@@H](O[C@@]2(C[C@@H](O)[C@@H](O)[C@]([H])(O2)[C@H](O)CO)C(O)=O)[C@H]1O)C(O)=O)C(O)=O)[C@H](O)CO
Roles Classification
Biological Role(s): epitope
The biological role played by a material entity when bound by a receptor of the adaptive immune system. Specific site on an antigen to which an antibody binds.
View more via ChEBI Ontology
ChEBI Ontology
Outgoing α-Kdo-(2→8)-[α-Kdo-(2→4)]-α-Kdo (CHEBI:60393) has role epitope (CHEBI:53000)
α-Kdo-(2→8)-[α-Kdo-(2→4)]-α-Kdo (CHEBI:60393) is a trisaccharide (CHEBI:27150)
IUPAC Name
3-deoxy-α-D-manno-oct-2-ulopyranonosyl-(2→4)-[3-deoxy-α-D-manno-oct-2-ulopyranonosyl-(2→8)]-3-deoxy-α-D-manno-oct-2-ulopyranosonic acid
Synonym Source
Kdo(2→8)[Kdo(2→4)]Kdo ChEBI
Citation Waiting for Citations Type Source
20000757 PubMed citation Europe PMC
Last Modified
11 October 2010