Filter results
Curation status
Model format
Modelling Approach
Model Tag
Organisms
GO
- obsolete cellular metabolic process (35)
- extracellular region (6)
- mitochondrion (5)
- cytoplasm (5)
- peroxisome (4)
- Golgi apparatus (4)
- nucleus (4)
- endoplasmic reticulum (4)
- lysosome (3)
- regulation of growth (3)
- cytosol (3)
- nitrogen cycle metabolic process (1)
- DNA biosynthetic process (1)
- glycolipid biosynthetic process (1)
- protein folding (1)
- metabolic process (1)
- RNA catabolic process (1)
- RNA biosynthetic process (1)
- obsolete cellular lipid metabolic process (1)
- ornithine decarboxylase activity (1)
- nitric-oxide synthase activity (1)
- GO:0015326 (1)
- arginase activity (1)
- ornithine metabolic process (1)
- nitric oxide biosynthetic process (1)
- L-arginine catabolic process (1)
- putrescine catabolic process (1)
- acetyl-CoA biosynthetic process (1)
- acetyl-CoA catabolic process (1)
- polyamine metabolic process (1)
- vacuole (1)
- extracellular space (1)
- generation of precursor metabolites and energy (1)
- translation (1)
- protein catabolic process (1)
UNIPROT
- P30613 (3)
- P06744 (3)
- P06733 (3)
- P09104 (3)
- P13929 (3)
- P08237 (3)
- O14556 (3)
- P00558 (3)
- P07205 (3)
- P18669 (3)
- P60174 (3)
- Q01813 (2)
- P43490 (2)
- P04406 (2)
- P14618 (2)
- P17858 (2)
- P21439 (2)
- P05062 (2)
- P09972 (2)
- P04075 (2)
- P07738 (2)
- P00338 (2)
- P07195 (2)
- P26725 (2)
- P33300 (2)
- P54070 (2)
- P12685 (2)
- P42951 (2)
- P40361 (2)
- Q08650 (2)
- Q12271 (2)
- P27810 (2)
- P17324 (2)
- Q12043 (2)
- P40471 (2)
- Q08227 (2)
- P20133 (2)
- P06197 (2)
- Q08108 (2)
- P40511 (2)
- Q12007 (2)
- P53629 (2)
- P40556 (2)
- Q08987 (2)
- P40559 (2)
- P40345 (2)
- P32383 (2)
- P41819 (2)
- P42837 (2)
- Q07950 (2)
- P39104 (2)
- P53037 (2)
- Q07804 (2)
- P05374 (2)
- Q04396 (2)
- P38150 (2)
- P39006 (2)
- P27809 (2)
- P36165 (2)
- P22140 (2)
- P36973 (2)
- P17898 (2)
- P50942 (2)
- P38130 (2)
- P36148 (2)
- P38131 (2)
- P33550 (2)
- P54005 (2)
- P40308 (2)
- Q04952 (2)
- P38286 (2)
- P36126 (2)
- Q05521 (2)
- P32368 (2)
- P32600 (2)
- P38994 (2)
- P38221 (2)
- P38954 (2)
- P54857 (2)
- Q03175 (2)
- P34756 (2)
- P35196 (2)
- P35172 (2)
- P34163 (2)
- P39105 (2)
- P36001 (2)
- Q03674 (2)
- P32784 (2)
- O42831 (2)
- Q04958 (2)
- P39567 (2)
- Q07560 (2)
- P36107 (2)
- P22007 (2)
- P33333 (2)
- P47147 (2)
- Q00055 (2)
- P08456 (2)
- P40015 (2)
- P25628 (2)
- P05375 (2)
- P35169 (2)
- P37297 (2)
- P22543 (2)
- P39953 (2)
- P33751 (2)
- P25578 (2)
- P22434 (2)
- P06776 (2)
- Q06147 (2)
- Q12246 (2)
- P50107 (2)
- P32327 (2)
- P11154 (2)
- P11325 (2)
- P40363 (2)
- P26637 (2)
- P07284 (2)
- P40459 (2)
- P38169 (2)
- Q99297 (2)
- Q03028 (2)
- P25379 (2)
- P13298 (2)
- P30402 (2)
- P35497 (2)
- P47013 (2)
- Q12375 (2)
- P07991 (2)
- P07264 (2)
- P23501 (2)
- P25087 (2)
- P04173 (2)
- P08432 (2)
- P03962 (2)
- P15496 (2)
- P08536 (2)
- P38998 (2)
- P30605 (2)
- P33330 (2)
- P30606 (2)
- P38999 (2)
- Q12189 (2)
- P38697 (2)
- P05150 (2)
- P50095 (2)
- P46969 (2)
- P25045 (2)
- P40970 (2)
- P50094 (2)
- P32332 (2)
- P48526 (2)
- P31115 (2)
- P09436 (2)
- P47016 (2)
- P38891 (2)
- P53167 (2)
- P48567 (2)
- P47176 (2)
- P06633 (2)
- P38145 (2)
- Q12211 (2)
- P33734 (2)
- P28240 (2)
- P42826 (2)
- P47165 (2)
- P00549 (2)
- P53982 (2)
- P21954 (2)
- P52489 (2)
- P38196 (2)
- P41939 (2)
- P05316 (2)
- P18562 (2)
- P40260 (2)
- P41948 (2)
- P07172 (2)
- P41903 (2)
- P32347 (2)
- P53598 (2)
- P53312 (2)
- P28834 (2)
- P06174 (2)
- P42941 (2)
- P17423 (2)
- P53390 (2)
- P08465 (2)
- Q05567 (2)
- P36150 (2)
- P38063 (2)
- P31116 (2)
- P36010 (2)
- P32263 (2)
- P38620 (2)
- P32459 (2)
- P38689 (2)
- Q08224 (2)
- Q99271 (2)
- Q08975 (2)
- P32895 (2)
- P04397 (2)
- P43123 (2)
- Q12265 (2)
- Q06490 (2)
- P39965 (2)
- P48527 (2)
- P36421 (2)
- P38708 (2)
- P12684 (2)
- P12683 (2)
- P09368 (2)
- P04803 (2)
- P40545 (2)
- P28789 (2)
- Q05979 (2)
- P38972 (2)
- Q12109 (2)
- P00931 (2)
- P27616 (2)
- Q06892 (2)
- P00912 (2)
- P47125 (2)
- P48016 (2)
- P07244 (2)
- P06775 (2)
- P18900 (2)
- P32356 (2)
- P38426 (2)
- P40012 (2)
- P38635 (2)
- P32340 (2)
- Q07500 (2)
- P00815 (2)
- P32452 (2)
- P38427 (2)
- Q00764 (2)
- P20049 (2)
- P40495 (2)
- P40215 (2)
- P04806 (2)
- P10963 (2)
- P31688 (2)
- P05373 (2)
- P04807 (2)
- P53128 (2)
- P41835 (2)
- P28239 (2)
- P00942 (2)
- P00817 (2)
- P21592 (2)
- P46151 (2)
- Q02046 (2)
- P06785 (2)
- P35202 (2)
- P25621 (2)
- P38122 (2)
- Q04430 (2)
- P33315 (2)
- P23254 (2)
- Q12525 (2)
- Q12372 (2)
- P11986 (2)
- Q08985 (2)
- P07236 (2)
- P04801 (2)
- P24521 (2)
- Q12122 (2)
- Q05533 (2)
- P38710 (2)
- P48570 (2)
- P07283 (2)
- P00927 (2)
- P37303 (2)
- P40035 (2)
- P32378 (2)
- Q06667 (2)
- P49367 (2)
- Q05998 (2)
- Q08485 (2)
- P07277 (2)
- P50276 (2)
- P39535 (2)
- Q08579 (2)
- P53257 (2)
- P25297 (2)
- Q04178 (2)
- P38734 (2)
- P22438 (2)
- P27514 (2)
- P32622 (2)
- P38816 (2)
- P06208 (2)
- P23641 (2)
- P00958 (2)
- P38066 (2)
- P51601 (2)
- P05694 (2)
- P08425 (2)
- P29509 (2)
- P15624 (2)
- Q05902 (2)
- Q08220 (2)
- Q04533 (2)
- P15625 (2)
- P07806 (2)
- P53090 (2)
- P19358 (2)
- P10659 (2)
- P38840 (2)
- Q08645 (2)
- P15700 (2)
- P33401 (2)
- P36013 (2)
- P38143 (2)
- P40581 (2)
- P32419 (2)
- P37012 (2)
- P53228 (2)
- Q12008 (2)
- P17505 (2)
- P36014 (2)
- P22133 (2)
- Q12326 (2)
- P15019 (2)
- P39692 (2)
- P37262 (2)
- Q12031 (2)
- P29952 (2)
- P53315 (2)
- P47169 (2)
- P21524 (2)
- P00724 (2)
- P38858 (2)
- P41940 (2)
- Q06143 (2)
- P50278 (2)
- P33303 (2)
- Q03778 (2)
- P21672 (2)
- P18408 (2)
- P00560 (2)
- P38156 (2)
- Q02979 (2)
- P40054 (2)
- P43619 (2)
- P10614 (2)
- P00175 (2)
- P40510 (2)
- P53048 (2)
- P53319 (2)
- P38720 (2)
- P47186 (2)
- P40433 (2)
- Q06178 (2)
- P53184 (2)
- Q12471 (2)
- P38158 (2)
- P38625 (2)
- P38088 (2)
- P53051 (2)
- P16862 (2)
- P39683 (2)
- P38795 (2)
- P33421 (2)
- P16861 (2)
- P53341 (2)
- Q06817 (2)
- Q12320 (2)
- P33412 (2)
- P38067 (2)
- P21373 (2)
- P29704 (2)
- P32901 (2)
- P40884 (2)
- Q05584 (2)
- P32190 (2)
- P12945 (2)
- P32476 (2)
- P54839 (2)
- P07263 (2)
- Q12455 (2)
- P37293 (2)
- P21826 (2)
- P23337 (2)
- P30952 (2)
- P38075 (2)
- Q12074 (2)
- P41921 (2)
- P33413 (2)
- P12695 (2)
- P32487 (2)
- P27472 (2)
- P32048 (2)
- P38359 (2)
- P53273 (2)
- P16387 (2)
- P15180 (2)
- P23900 (2)
- P38604 (2)
- Q12325 (2)
- P38071 (2)
- Q08409 (2)
- P49090 (2)
- P48525 (2)
- P46655 (2)
- P49089 (2)
- P19097 (2)
- P38152 (2)
- P29465 (2)
- P07149 (2)
- P00924 (2)
- Q12680 (2)
- P04046 (2)
- P00925 (2)
- P13711 (2)
- P14180 (2)
- P08004 (2)
- P32316 (2)
- P17709 (2)
- P39708 (2)
- P11163 (2)
- Q06702 (2)
- Q06703 (2)
- P07342 (2)
- P38986 (2)
- P07262 (2)
- P33327 (2)
- P13663 (2)
- Q02207 (2)
- P28777 (2)
- P32178 (2)
- P38791 (2)
- P38074 (2)
- Q04792 (2)
- P32477 (2)
- P33317 (2)
- Q04728 (2)
- P20485 (2)
- P19807 (2)
- Q01217 (2)
- Q05788 (2)
- P04817 (2)
- P32264 (2)
- P38971 (2)
- P00572 (2)
- P38628 (2)
- P13259 (2)
- Q03529 (2)
- P43577 (2)
- P38714 (2)
- P14743 (2)
- P13188 (2)
- Q05506 (2)
- P33312 (2)
- P32874 (2)
- P38703 (2)
- P28496 (2)
- Q00955 (2)
- P25332 (2)
- P22768 (2)
- P32288 (2)
- P06738 (2)
- P04076 (2)
- P06168 (2)
- P27796 (2)
- P38992 (2)
- P38298 (2)
- P41338 (2)
- P38787 (2)
- P00812 (2)
- P38115 (2)
- P32377 (2)
- P15380 (2)
- Q02896 (2)
- P40047 (2)
- P00950 (2)
- P37292 (2)
- P37291 (2)
- P14020 (2)
- P46367 (2)
- P17649 (2)
- P33775 (2)
- P14742 (2)
- P00937 (2)
- P31382 (2)
- P03965 (2)
- P07702 (2)
- P52867 (2)
- P00899 (2)
- P49095 (2)
- P48015 (2)
- P07285 (2)
- P42934 (2)
- P53744 (2)
- P15202 (2)
- P06115 (2)
- P32837 (2)
- P46971 (2)
- P15274 (2)
- P32775 (2)
- P22580 (2)
- P47190 (2)
- P16120 (2)
- P32352 (2)
- P32353 (2)
- P07275 (2)
- P20048 (2)
- Q03557 (2)
- P04161 (2)
- P00359 (2)
- Q12154 (2)
- P53045 (2)
- Q12452 (2)
- P08524 (2)
- Q08986 (2)
- P00360 (2)
- P00358 (2)
- P50277 (2)
- P26263 (2)
- P53199 (2)
- P25340 (2)
- P06169 (2)
- P32528 (2)
- P39932 (2)
- P13181 (2)
- P15365 (2)
- P32469 (2)
- P16467 (2)
- P08566 (2)
- Q04895 (2)
- P42833 (2)
- P38709 (2)
- P32375 (2)
- P20051 (2)
- P47096 (2)
- P54781 (2)
- P38342 (2)
- P28272 (2)
- P25335 (2)
- P32861 (2)
- P08431 (2)
- P54115 (2)
- P53848 (2)
- P16603 (2)
- P32462 (2)
- P27680 (2)
- Q12676 (2)
- P54114 (2)
- P04385 (2)
- P12709 (2)
- P47771 (2)
- P07807 (2)
- P49017 (2)
- P32451 (2)
- P53241 (2)
- P43550 (2)
- P11412 (2)
- P54885 (2)
- P54838 (2)
- P53318 (2)
- P32179 (2)
- P07246 (2)
- P39522 (2)
- P40106 (2)
- P41277 (2)
- P15454 (2)
- P38113 (2)
- P18239 (2)
- P32771 (2)
- P40439 (2)
- P32191 (2)
- P21147 (2)
- P10127 (2)
- P18238 (2)
- P04710 (2)
- P00331 (2)
- P32449 (2)
- P41911 (2)
- P25346 (2)
- P14843 (2)
- P00330 (2)
- P06773 (2)
- P08417 (2)
- P09440 (2)
- P53630 (2)
- P40989 (2)
- P38631 (2)
- P25376 (2)
- P07245 (2)
- P36035 (2)
- P19145 (2)
- P52911 (2)
- P15703 (2)
- P38967 (2)
- P54854 (2)
- P39004 (2)
- P32891 (2)
- P53388 (2)
- P23776 (2)
- P40825 (2)
- P27515 (2)
- P52893 (2)
- P32603 (2)
- P52892 (2)
- Q06549 (2)
- P39924 (2)
- P43581 (2)
- P38084 (2)
- P09950 (2)
- P11491 (2)
- P38085 (2)
- P32467 (2)
- P32465 (2)
- P41815 (2)
- P20967 (2)
- P07251 (2)
- P09624 (2)
- P32582 (2)
- P38695 (2)
- P40886 (2)
- P53852 (2)
- P21264 (2)
- P43623 (2)
- P40885 (2)
- P47185 (2)
- P54113 (2)
- P38009 (2)
- P31373 (2)
- P23585 (2)
- P53631 (2)
- P53206 (2)
- P06106 (2)
- P39954 (2)
- P54862 (2)
- P43567 (2)
- P80210 (2)
- P21375 (2)
- P32614 (2)
- Q05911 (2)
- Q02196 (2)
- P38913 (2)
- P49435 (2)
- P08067 (2)
- P32785 (2)
- Q04179 (2)
- P47143 (2)
- Q08911 (2)
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- P16622 (2)
- P32604 (2)
- P17064 (2)
- P40975 (2)
- P32903 (2)
- P40039 (2)
- P09201 (2)
- P14540 (2)
- Q12119 (2)
- P00498 (2)
- P53099 (2)
- P40319 (2)
- Q99190 (2)
- P37254 (2)
- P16550 (2)
- P22108 (2)
- P25358 (2)
- P39540 (2)
- P53909 (2)
- P25613 (2)
- Q05871 (2)
- P00401 (2)
- P25356 (2)
- P43548 (2)
- Q01574 (2)
- Q08558 (2)
- P32573 (2)
- P28274 (2)
- P52910 (2)
- P15179 (2)
- P04802 (2)
- Q12036 (2)
- P38627 (2)
- P40464 (2)
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- P08679 (2)
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- Q01802 (2)
- P23542 (2)
- P00890 (2)
- P47912 (2)
- P30624 (2)
- P43635 (2)
- P18544 (2)
- P10869 (2)
- Q12482 (2)
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- P40017 (2)
- P32796 (2)
- Q12283 (2)
- P32463 (2)
- P38090 (2)
- Q03764 (2)
- Q12289 (2)
- P35731 (2)
- P48813 (2)
- P25345 (2)
- P38790 (2)
- P11353 (2)
- P38299 (2)
- P39525 (2)
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- P12351 (1)
- P40441 (1)
- P25601 (1)
- P26188 (1)
- P14771 (1)
- P38830 (1)
- P14164 (1)
- P50083 (1)
- P47098 (1)
- P40587 (1)
- P39546 (1)
- P32896 (1)
- P36039 (1)
- P42844 (1)
- Q03180 (1)
- P12294 (1)
- Q12088 (1)
- O13527 (1)
- P48559 (1)
- P25561 (1)
- P40068 (1)
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- P50273 (1)
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- Q06053 (1)
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- P54074 (1)
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- Q92325 (1)
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- Q12072 (1)
- P40519 (1)
- Q04902 (1)
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- Q08601 (1)
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- Q04930 (1)
- P32831 (1)
- Q12098 (1)
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- P53054 (1)
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- P38778 (1)
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- P25560 (1)
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- P39956 (1)
- Q12157 (1)
- P18494 (1)
- Q06493 (1)
- Q08994 (1)
- P53334 (1)
- P32945 (1)
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- ENSG00000138363 (1)
- ENSG00000132382 (1)
- ENSG00000124608 (1)
- ENSG00000105379 (1)
- ENSG00000168487 (1)
- ENSG00000173083 (1)
- ENSG00000116783 (1)
- ENSG00000109861 (1)
Model Flag
Search terms:
Found: 132 models Download Select all |
iSep23 – Genome-scale metabolic model of Staphylococcus epidermidis ATCC 12228
ID: MODEL2012220002
|
Submitter: Andreas Dräger |
Format: COMBINE archive |
Uploaded date: 22/12/2020 |
Last modified date:
Sen2021 - HTimmR - A generic human CD4+ T-cell model
ID: MODEL2101270002
|
Submitter: Partho Sen |
Format: SBML |
Uploaded date: 27/01/2021 |
Last modified date:
| Published in: 2021
Mardinoglu2015 - Tissue-specific genome-scale metabolic network - Uterus
ID: MODEL1509220027
|
Submitter: Nicolas Rodriguez |
Format: SBML |
Uploaded date: 22/09/2015 |
Last modified date:
| Published in: 2015
Mardinoglu2015 - Tissue-specific genome-scale metabolic network - Kidney medulla
ID: MODEL1509220008
|
Submitter: Nicolas Rodriguez |
Format: SBML |
Uploaded date: 22/09/2015 |
Last modified date:
| Published in: 2015
Mardinoglu2015 - Generic mouse genome-scale metabolic network (MMR)
ID: MODEL1509220028
|
Submitter: Nicolas Rodriguez |
Format: SBML |
Uploaded date: 22/09/2015 |
Last modified date:
| Published in: 2015
Mardinoglu2015 - Tissue-specific genome-scale metabolic network - Ileum
ID: MODEL1509220009
|
Submitter: Nicolas Rodriguez |
Format: SBML |
Uploaded date: 22/09/2015 |
Last modified date:
| Published in: 2015
Mardinoglu2015 - Tissue-specific genome-scale metabolic network - Duodenum
ID: MODEL1509220010
|
Submitter: Nicolas Rodriguez |
Format: SBML |
Uploaded date: 22/09/2015 |
Last modified date:
| Published in: 2015
Mardinoglu2015 - Curated tissue-specific genome-scale metabolic network - Adipose
ID: MODEL1509220031
|
Submitter: Nicolas Rodriguez |
Format: SBML |
Uploaded date: 22/09/2015 |
Last modified date:
| Published in: 2015
Mardinoglu2015 - Tissue-specific genome-scale metabolic network - Brain cortex
ID: MODEL1509220013
|
Submitter: Nicolas Rodriguez |
Format: SBML |
Uploaded date: 22/09/2015 |
Last modified date:
| Published in: 2015
Sl2183 - Tomato metabolic model
ID: MODEL2111120001
|
Submitter: Ludovic Cottret |
Format: SBML |
Uploaded date: 12/11/2021 |
Last modified date:
| Published in: 2022
Quick links
Parameters Search
BioModels Parameters is a resource that facilitates easy search and retrieval of parameter values used in the SBML models stored in the BioModels repository.
Using GO Chart
This is a chart view of the models in this Database based on Gene Ontology.
Neurodegeneration models
Mechanistic models describing neurodegenerative disease processes
Path2Models
The approximately 140,000 models in the Path2Models project are now grouped taxonomically into 812 bundles, typically one per genus.
Patient-derived genome metabolic models
This section hosts models of metabolic pathways that are specific to individual patients