Filter results
Curation status
Model format
Modelling Approach
Model Flag
Organisms
Disease
GO
- cell death (4)
- mRNA transcription (4)
- protein export from nucleus (4)
- protein import into nucleus (4)
- GO:1990126 (3)
- endosomal transport (3)
- mRNA processing (3)
- plasma membrane to endosome transport (3)
- protein heterotrimerization (3)
- protein homotrimerization (3)
- protein localization to cell surface (3)
- protein trimerization (3)
- receptor catabolic process (3)
- receptor recycling (3)
- sequestering of TGFbeta from receptor via TGFbeta binding (3)
- transforming growth factor beta ligand-receptor complex (3)
- transforming growth factor beta receptor signaling pathway (3)
- viral entry into host cell (3)
- cell population proliferation (2)
- dephosphorylation (2)
- immune response (2)
- phosphorylation (2)
- positive regulation of translation (2)
- protein binding (2)
- protein catabolic process (2)
- regulation of immune response to tumor cell (2)
- viral release from host cell by cytolysis (2)
- DNA synthesis involved in DNA repair (1)
- GO:0006461 (1)
- protein complex disassembly (1)
- GO:0043624 (1)
- GO:0048305 (1)
- MAP kinase kinase activity (1)
- MAP kinase kinase kinase activity (1)
- MAPK cascade (1)
- T cell activation (1)
- T cell mediated cytotoxicity (1)
- adaptive immune response (1)
- antigen processing and presentation (1)
- binding (1)
- biosynthetic process (1)
- cell competition in a multicellular organism (1)
- cell killing (1)
- cellular response to radiation (1)
- cyclin B1-CDK1 complex (1)
- cytotoxic T cell differentiation (1)
- epidermal growth factor receptor ligand maturation (1)
- growth factor receptor binding (1)
- innate immune response (1)
- interferon-gamma production (1)
- mRNA catabolic process (1)
- membrane depolarization (1)
- mitochondrial respiratory chain complex I (1)
- mitotic spindle organization (1)
- mitotic spindle orientation checkpoint signaling (1)
- natural killer cell proliferation (1)
- non-lytic viral release (1)
- obsolete activation of MAPK activity (1)
- obsolete activation of MAPKK activity (1)
- obsolete activation of MAPKKK activity (1)
- obsolete cell (1)
- obsolete inactivation of MAPK activity (1)
- obsolete inactivation of MAPKK activity (1)
- obsolete inactivation of MAPKKK activity (1)
- obsolete transmission of virus (1)
- positive regulation of natural killer cell proliferation (1)
- pre-replicative complex (1)
- programmed cell death (1)
- protein activation cascade (1)
- protein dephosphorylation (1)
- protein phosphorylation (1)
- regulation of MAPK cascade (1)
- regulation of canonical Wnt signaling pathway (1)
- regulation of cell cycle (1)
- regulation of protein activation cascade (1)
- regulation of protein kinase B signaling (1)
- ripoptosome (1)
- tolerance induction (1)
- type I interferon production (1)
- viral release from host cell (1)
UNIPROT
- Mothers against decapentaplegic homolog 7 (3)
- Transforming growth factor beta-1 (3)
- P36897 (3)
- TGF-beta receptor type-2 (3)
- Q13485 (3)
- Mothers against decapentaplegic homolog 2 (3)
- Adenomatous polyposis coli protein (2)
- I6X8D2 (1)
- I6Y778 (1)
- Segment polarity protein dishevelled homolog DVL-1 (1)
- Axin-1 (1)
- O53578 (1)
- O53580 (1)
- O89110 (1)
- P00533 (1)
- Complement C3 (1)
- GTPase HRas (1)
- Pro-epidermal growth factor (1)
- RAF proto-oncogene serine/threonine-protein kinase (1)
- Cellular tumor antigen p53 (1)
- Cyclin-dependent kinase 1 (1)
- P0CH91 (1)
- Proliferating cell nuclear antigen (1)
- G2/mitotic-specific cyclin-B1 (1)
- Serine/threonine-protein kinase B-raf (1)
- Ras GTPase-activating protein 1 (1)
- G1/S-specific cyclin-E1 (1)
- P24941 (1)
- P27361 (1)
- P28482 (1)
- Phosphatidylethanolamine-binding protein 1 (1)
- P31749 (1)
- Catenin beta-1 (1)
- P38936 (1)
- Protein TEM1 (1)
- Mitotic check point protein BFA1 (1)
- Rap1 GTPase-activating protein 1 (1)
- Glycogen synthase kinase-3 beta (1)
- Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (1)
- Ras-related protein R-Ras2 (1)
- Ras-related protein Rap-1A (1)
- Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform (1)
- Cyclin-A1 (1)
- P95029 (1)
- P96890 (1)
- P9WGR1 (1)
- P9WGR9 (1)
- P9WGT3 (1)
- P9WNG3 (1)
- P9WNG5 (1)
- P9WNZ3 (1)
- P9WNZ7 (1)
- P9WPB1 (1)
- P9WPB3 (1)
- P9WPB5 (1)
- P9WQD3 (1)
- P9WQD7 (1)
- P9WQD9 (1)
- P9WQH7 (1)
- P9WQH9 (1)
- Dual specificity mitogen-activated protein kinase kinase 1 (1)
- Protein kinase C delta type (1)
- Son of sevenless homolog 1 (1)
- Q08857 (1)
- S-phase kinase-associated protein 2 (1)
- Rap guanine nucleotide exchange factor 1 (1)
- Ribosomal protein S6 kinase alpha-1 (1)
- Q16236 (1)
- Q79FX6 (1)
- Q79FX8 (1)
- Q9EPB4 (1)
- Q9H3M7 (1)
- Denticleless protein homolog (1)
- Lymphoid enhancer-binding factor 1 (1)
- Q9ULZ3 (1)
- Perforin (1)
CHEBI
- CHEBI:144829 (2)
- CHEBI:10744 (1)
- CHEBI:10786 (1)
- CHEBI:10833 (1)
- CHEBI:113592 (1)
- CHEBI:113593 (1)
- CHEBI:12056 (1)
- CHEBI:12741 (1)
- CHEBI:12742 (1)
- CHEBI:12757 (1)
- CHEBI:12759 (1)
- CHEBI:12760 (1)
- CHEBI:12761 (1)
- CHEBI:13222 (1)
- CHEBI:13234 (1)
- CHEBI:13235 (1)
- CHEBI:13282 (1)
- CHEBI:13283 (1)
- CHEBI:13284 (1)
- CHEBI:13285 (1)
- CHEBI:13298 (1)
- CHEBI:13351 (1)
- CHEBI:13357 (1)
- CHEBI:13363 (1)
- CHEBI:13365 (1)
- CHEBI:13393 (1)
- CHEBI:13394 (1)
- CHEBI:13395 (1)
- CHEBI:13396 (1)
- CHEBI:13397 (1)
- CHEBI:13398 (1)
- CHEBI:13399 (1)
- CHEBI:13400 (1)
- CHEBI:13419 (1)
- CHEBI:13712 (1)
- CHEBI:13736 (1)
- CHEBI:13740 (1)
- CHEBI:13905 (1)
- CHEBI:14405 (1)
- CHEBI:14565 (1)
- CHEBI:14791 (1)
- CHEBI:15346 (1)
- CHEBI:15351 (1)
- CHEBI:15377 (1)
- CHEBI:15378 (1)
- CHEBI:15414 (1)
- CHEBI:15531 (1)
- CHEBI:15846 (1)
- CHEBI:15956 (1)
- CHEBI:15996 (1)
- CHEBI:16027 (1)
- CHEBI:16234 (1)
- CHEBI:16474 (1)
- CHEBI:16526 (1)
- CHEBI:16680 (1)
- CHEBI:16761 (1)
- CHEBI:16908 (1)
- CHEBI:16991 (1)
- CHEBI:17087 (1)
- CHEBI:17544 (1)
- CHEBI:17552 (1)
- CHEBI:18009 (1)
- CHEBI:18359 (1)
- CHEBI:18361 (1)
- CHEBI:18367 (1)
- CHEBI:211579 (1)
- CHEBI:21901 (1)
- CHEBI:21902 (1)
- CHEBI:21903 (1)
- CHEBI:21904 (1)
- CHEBI:22034 (1)
- CHEBI:22036 (1)
- CHEBI:22192 (1)
- CHEBI:22221 (1)
- CHEBI:22242 (1)
- CHEBI:22244 (1)
- CHEBI:22245 (1)
- CHEBI:22323 (1)
- CHEBI:22863 (1)
- CHEBI:22882 (1)
- CHEBI:22884 (1)
- CHEBI:23011 (1)
- CHEBI:23017 (1)
- CHEBI:23355 (1)
- CHEBI:2342 (1)
- CHEBI:2356 (1)
- CHEBI:23744 (1)
- CHEBI:23916 (1)
- CHEBI:2408 (1)
- CHEBI:2458 (1)
- CHEBI:24712 (1)
- CHEBI:25134 (1)
- CHEBI:25135 (1)
- CHEBI:25436 (1)
- CHEBI:25437 (1)
- CHEBI:25438 (1)
- CHEBI:25523 (1)
- CHEBI:26020 (1)
- CHEBI:26078 (1)
- CHEBI:27313 (1)
- CHEBI:28976 (1)
- CHEBI:29137 (1)
- CHEBI:29139 (1)
- CHEBI:29201 (1)
- CHEBI:29356 (1)
- CHEBI:29358 (1)
- CHEBI:29412 (1)
- CHEBI:29867 (1)
- CHEBI:29868 (1)
- CHEBI:29888 (1)
- CHEBI:30490 (1)
- CHEBI:3108 (1)
- CHEBI:3283 (1)
- CHEBI:33249 (1)
- CHEBI:33442 (1)
- messenger RNA (1)
- CHEBI:33813 (1)
- CHEBI:3401 (1)
- CHEBI:35780 (1)
- CHEBI:3771 (1)
- CHEBI:389573 (1)
- CHEBI:39739 (1)
- CHEBI:39745 (1)
- CHEBI:40470 (1)
- CHEBI:40510 (1)
- CHEBI:40553 (1)
- CHEBI:40721 (1)
- CHEBI:40726 (1)
- CHEBI:40786 (1)
- CHEBI:40826 (1)
- CHEBI:40961 (1)
- CHEBI:41236 (1)
- CHEBI:41597 (1)
- CHEBI:41605 (1)
- CHEBI:41609 (1)
- CHEBI:41631 (1)
- CHEBI:42043 (1)
- CHEBI:42857 (1)
- CHEBI:43176 (1)
- CHEBI:43228 (1)
- CHEBI:43470 (1)
- CHEBI:43474 (1)
- CHEBI:43979 (1)
- CHEBI:44214 (1)
- CHEBI:44215 (1)
- CHEBI:44216 (1)
- CHEBI:44281 (1)
- CHEBI:44286 (1)
- CHEBI:44292 (1)
- CHEBI:44405 (1)
- CHEBI:44409 (1)
- CHEBI:44520 (1)
- CHEBI:44641 (1)
- CHEBI:44701 (1)
- CHEBI:44819 (1)
- CHEBI:45024 (1)
- CHEBI:45495 (1)
- CHEBI:45607 (1)
- CHEBI:456215 (1)
- CHEBI:456216 (1)
- CHEBI:47222 (1)
- CHEBI:48829 (1)
- CHEBI:527887 (1)
- CHEBI:5584 (1)
- CHEBI:5585 (1)
- CHEBI:5589 (1)
- CHEBI:5594 (1)
- CHEBI:5632460 (1)
- CHEBI:5696069 (1)
- CHEBI:57287 (1)
- CHEBI:57288 (1)
- CHEBI:57384 (1)
- CHEBI:57540 (1)
- CHEBI:57586 (1)
- CHEBI:57783 (1)
- CHEBI:57856 (1)
- CHEBI:57945 (1)
- CHEBI:58349 (1)
- antigen (1)
- CHEBI:60151 (1)
- CHEBI:6661 (1)
- CHEBI:67009 (1)
- CHEBI:6798184 (1)
- CHEBI:741566 (1)
- CHEBI:7422 (1)
- CHEBI:7423 (1)
- CHEBI:7424 (1)
- CHEBI:7425 (1)
- CHEBI:7793 (1)
- CHEBI:87518 (1)
- CHEBI:8869363 (1)
- CHEBI:8878982 (1)
- CHEBI:8938081 (1)
- CHEBI:8945 (1)
Search terms:
Found: 35 models Download Select all |
Araujo2016 - Positive feedback in Cdk1 signalling keeps mitotic duration short and constant
ID: BIOMD0000000657
|
Format: SBML |
Submitter: Rahuman Sheriff |
Uploaded date: 09/11/2018 |
Last modified date: 21/12/2018
| Published in: 2016
Sips2015 - Glucose and non-esterified fatty acids (NEFA) metabolism
ID: MODEL1806080001
|
Format: SBML |
Submitter: Rahuman Sheriff |
Uploaded date: 17/01/2019 |
Last modified date: 17/01/2019
| Published in: 2015
Shaw2019 - Digital biosensor model from Yeast
ID: MODEL1901300002
|
Format: SBML |
Submitter: Rahuman Sheriff |
Uploaded date: 30/04/2019 |
Last modified date: 30/04/2019
| Published in: 2019
Strasen2018 - TGFb SMAD Signalling Class 6
ID: BIOMD0000001003
|
Format: SBML |
Submitter: Rahuman Sheriff |
Uploaded date: 10/04/2018 |
Last modified date: 25/02/2021
| Published in: 2018
Strasen2018 - TGFb SMAD Signalling Class 4
ID: BIOMD0000001001
|
Format: SBML |
Submitter: Rahuman Sheriff |
Uploaded date: 10/04/2018 |
Last modified date: 25/02/2021
| Published in: 2018
Viertel2019 - A Computational model of the mammalian external tufted cell
ID: BIOMD0000000844
|
Format: SBML |
Submitter: Rahuman Sheriff |
Uploaded date: 05/10/2021 |
Last modified date: 05/10/2021
| Published in: 2019
Mulberry2020 - Three-layered, self-organizing multicellular structure where all cells randomly belong to one of the two genotypes
ID: MODEL2009210002
|
Format: MorpheusML |
Submitter: Rahuman Sheriff |
Uploaded date: 25/09/2020 |
Last modified date: 12/10/2021
| Published in: 2020
Miao2010 - Innate and adaptive immune responses to primary Influenza A Virus infection_1_1
ID: BIOMD0000000546
|
Format: SBML |
Submitter: Rahuman Sheriff |
Uploaded date: 05/10/2021 |
Last modified date: 05/10/2021
| Published in: 2010
Barr2017 - Dynamics of p21 in hTert-RPE1 cells
ID: BIOMD0000000660
|
Format: SBML |
Submitter: Rahuman Sheriff |
Uploaded date: 06/12/2017 |
Last modified date: 06/12/2017
| Published in: 2017
Galante2012 - B7-H1 and a Mathematical Model for Cytotoxic T Cell and Tumor Cell Interaction
ID: BIOMD0000000812
|
Format: SBML |
Submitter: Rahuman Sheriff |
Uploaded date: 05/10/2021 |
Last modified date: 05/10/2021
| Published in: 2012
Last
Quick links
Parameters Search
BioModels Parameters is a resource that facilitates easy search and retrieval of parameter values used in the SBML models stored in the BioModels repository.
Using GO Chart
This is a chart view of the models in this Database based on Gene Ontology.
Neurodegeneration models
Mechanistic models describing neurodegenerative disease processes
Path2Models
The approximately 140,000 models in the Path2Models project are now grouped taxonomically into 812 bundles, typically one per genus.
Patient-derived genome metabolic models
This section hosts models of metabolic pathways that are specific to individual patients