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Model format
Modelling Approach
Organisms
Disease
GO
- nucleus (7)
- blood coagulation (6)
- binding (5)
- immune response to tumor cell (4)
- protein binding (4)
- protein catabolic process (4)
- protein export from nucleus (4)
- protein import into nucleus (4)
- T cell mediated cytotoxicity directed against tumor cell target (3)
- T cell mediated immune response to tumor cell (3)
- cytoplasm (3)
- dephosphorylation (3)
- extracellular region (3)
- iron ion homeostasis (3)
- iron ion transport (3)
- obsolete cell (3)
- receptor catabolic process (3)
- GO:1990126 (2)
- cytosol (2)
- endosomal transport (2)
- mRNA catabolic process (2)
- mRNA processing (2)
- mRNA transcription (2)
- mitotic cell cycle (2)
- phosphorylation (2)
- plasma membrane to endosome transport (2)
- post-translational protein modification (2)
- protein heterotrimerization (2)
- protein homotrimerization (2)
- protein localization to cell surface (2)
- protein phosphorylation (2)
- protein trimerization (2)
- receptor recycling (2)
- response to tumor necrosis factor (2)
- sequestering of TGFbeta from receptor via TGFbeta binding (2)
- transcription, DNA-templated (2)
- transforming growth factor beta ligand-receptor complex (2)
- transforming growth factor beta production (2)
- transforming growth factor beta receptor signaling pathway (2)
- translation (2)
- 6-phosphofructokinase activity (1)
- CRD-mediated mRNA stabilization (1)
- DNA damage response, detection of DNA damage (1)
- GI:0004709 (1)
- GO:0001047 (1)
- GO:000821 (1)
- glucose transport (1)
- protein complex (1)
- GO:006470 (1)
- MAP kinase kinase activity (1)
- MAP kinase kinase kinase activity (1)
- MAPK cascade (1)
- T cell receptor signaling pathway (1)
- T-helper 17 cell differentiation (1)
- activation of MAPK activity (1)
- activation of MAPKK activity (1)
- activation of MAPKKK activity (1)
- adaptive immune response (1)
- adenylate kinase activity (1)
- biological regulation (1)
- biosynthetic process (1)
- bone remodeling (1)
- calcium ion homeostasis (1)
- cartilage development (1)
- cell death (1)
- cell growth (1)
- cell population proliferation (1)
- cellular protein complex disassembly (1)
- core promoter sequence-specific DNA binding (1)
- cytokine-mediated signaling pathway (1)
- efflux transmembrane transporter activity (1)
- epidermal growth factor receptor ligand maturation (1)
- extracellular membrane-bounded organelle (1)
- fructose-bisphosphate aldolase activity (1)
- glucose-6-phosphate isomerase activity (1)
- glycerol biosynthetic process (1)
- glycogen biosynthetic process (1)
- glycolytic process (1)
- growth factor receptor binding (1)
- hexokinase activity (1)
- inactivation of MAPK activity (1)
- inactivation of MAPKK activity (1)
- inactivation of MAPKKK activity (1)
- integrin complex (1)
- intracellular anatomical structure (1)
- lysosome (1)
- membrane (1)
- mitotic spindle organization (1)
- mitotic spindle orientation checkpoint signaling (1)
- negative regulation of mitotic nuclear division (1)
- obsolete age-dependent response to oxidative stress involved in replicative cell aging (1)
- phosphoglycerate kinase activity (1)
- phosphoglycerate mutase activity (1)
- phosphopyruvate hydratase activity (1)
- platelet aggregation (1)
- positive regulation of translation (1)
- protein activation cascade (1)
- protein dephosphorylation (1)
- protein deubiquitination (1)
- protein-DNA complex assembly (1)
- pyruvate decarboxylase activity (1)
- pyruvate kinase activity (1)
- receptor complex (1)
- receptor internalization (1)
- regulation of MAPK cascade (1)
- regulation of T cell mediated immune response to tumor cell (1)
- regulation of canonical Wnt signaling pathway (1)
- regulation of cell cycle (1)
- regulation of parathyroid hormone secretion (1)
- regulation of protein activation cascade (1)
- regulation of protein kinase B signaling (1)
- regulation of protein stability (1)
- regulation of type I interferon-mediated signaling pathway (1)
- response to tumor cell (1)
- signaling (1)
- transforming growth factor beta receptor complex assembly (1)
- triose-phosphate isomerase activity (1)
UNIPROT
- Transforming growth factor beta-1 (7)
- Phosphatidylinositol 3-kinase regulatory subunit alpha (4)
- P36897 (4)
- Interleukin-2 (4)
- Mothers against decapentaplegic homolog 2 (4)
- Mothers against decapentaplegic homolog 7 (3)
- Mitogen-activated protein kinase 1 (3)
- RAC-alpha serine/threonine-protein kinase (3)
- Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN (3)
- Son of sevenless homolog 1 (3)
- Q13485 (3)
- Serotransferrin (3)
- Hepcidin (3)
- Mitogen-activated protein kinase kinase kinase 7 (2)
- Linker for activation of T-cells family member 1 (2)
- Epidermal growth factor receptor (2)
- P00734 (2)
- P00742 (2)
- Antithrombin-III (2)
- GTPase HRas (2)
- Pro-epidermal growth factor (2)
- RAF proto-oncogene serine/threonine-protein kinase (2)
- Cellular tumor antigen p53 (2)
- Tyrosine-protein kinase Lck (2)
- Tumor necrosis factor (2)
- Apoptosis regulator Bcl-2 (2)
- T-cell-specific surface glycoprotein CD28 (2)
- Coagulation factor V (2)
- Serine/threonine-protein kinase B-raf (2)
- Interleukin-10 (2)
- Nuclear factor NF-kappa-B p105 subunit (2)
- Mitogen-activated protein kinase 3 (2)
- TGF-beta receptor type-2 (2)
- Protein TEM1 (2)
- Signal transducer and activator of transcription 1-alpha/beta (2)
- Tyrosine-protein kinase ZAP-70 (2)
- Glycogen synthase kinase-3 beta (2)
- Growth factor receptor-bound protein 2 (2)
- Dual specificity mitogen-activated protein kinase kinase 1 (2)
- Runt-related transcription factor 2 (2)
- Mitogen-activated protein kinase 14 (2)
- Inhibitor of nuclear factor kappa-B kinase subunit alpha (2)
- Tumor necrosis factor alpha-induced protein 3 (2)
- Tumor necrosis factor receptor superfamily member 11B (1)
- Suppressor of cytokine signaling 3 (1)
- Segment polarity protein dishevelled homolog DVL-1 (1)
- Serine/threonine-protein kinase Chk1 (1)
- Tumor necrosis factor ligand superfamily member 11 (1)
- Inhibitor of nuclear factor kappa-B kinase subunit beta (1)
- Inhibitor of nuclear factor kappa-B kinase subunit alpha (1)
- Axin-1 (1)
- Mitogen-activated protein kinase 13 (1)
- Suppressor of cytokine signaling 1 (1)
- 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial (1)
- 3-phosphoinositide-dependent protein kinase 1 (1)
- Cell division control protein 45 homolog (1)
- O75444 (1)
- O75626 (1)
- Nuclear factor of activated T-cells, cytoplasmic 1 (1)
- O95936 (1)
- G1/S-specific cyclin-E2 (1)
- Superoxide dismutase [Cu-Zn] (1)
- Coagulation factor VIII (1)
- Cyclin-dependent kinase 1 (1)
- P00740 (1)
- Complement C3 (1)
- ATPase inhibitor, mitochondrial (1)
- Proto-oncogene c-Fos (1)
- Myc proto-oncogene protein (1)
- Parathyroid hormone (1)
- Interferon alpha-1/13 (1)
- Interferon gamma (1)
- Interleukin-1 alpha (1)
- P01589 (1)
- P01730 (1)
- Collagen alpha-1(II) chain (1)
- Transforming growth factor beta-1 (1)
- Fibroblast growth factor 1 (1)
- Transcription factor AP-1 (1)
- Retinoblastoma-associated protein (1)
- Cyclin-dependent kinase 1 (1)
- 72 kDa type IV collagenase (1)
- Interleukin-6 (1)
- Coagulation factor VII (1)
- Interleukin-6 receptor subunit alpha (1)
- Poly [ADP-ribose] polymerase 1 (1)
- DNA polymerase alpha catalytic subunit (1)
- Tissue factor pathway inhibitor (1)
- Fibroblast growth factor receptor 1 (1)
- Cyclin-dependent kinase 4 (1)
- Cadherin-1 (1)
- Proto-oncogene tyrosine-protein kinase Src (1)
- P13726 (1)
- P14316 (1)
- G2/mitotic-specific cyclin-B1 (1)
- Interleukin-1 receptor type 1 (1)
- Interleukin-2 receptor subunit beta (1)
- P15498 (1)
- Aggrecan core protein (1)
- Cyclic AMP-responsive element-binding protein 1 (1)
- P17181 (1)
- cAMP-dependent protein kinase catalytic subunit alpha (1)
- Tumor necrosis factor receptor superfamily member 1A (1)
- Nuclear factor NF-kappa-B p105 subunit (1)
- P20248 (1)
- Ras GTPase-activating protein 1 (1)
- T-cell surface glycoprotein CD3 zeta chain (1)
- G1/S-specific cyclin-D1 (1)
- G1/S-specific cyclin-E1 (1)
- G2/mitotic-specific cyclin-2 (1)
- P24941 (1)
- Adenomatous polyposis coli protein (1)
- NF-kappa-B inhibitor alpha (1)
- Catenin beta-1 (1)
- APC/C activator protein CDC20 (1)
- Cell division control protein 15 (1)
- SHC-transforming protein 1 (1)
- Phosphatidylethanolamine-binding protein 1 (1)
- G1/S-specific cyclin-D2 (1)
- G1/S-specific cyclin-D3 (1)
- Dehydrin Rab25 (1)
- Wee1-like protein kinase (1)
- M-phase inducer phosphatase 1 (1)
- M-phase inducer phosphatase 2 (1)
- M-phase inducer phosphatase 3 (1)
- Cytokine receptor common subunit gamma (1)
- Cell cycle serine/threonine-protein kinase CDC5/MSD2 (1)
- P33681 (1)
- Catenin beta-1 (1)
- P35398 (1)
- P35869 (1)
- Serine/threonine-protein kinase receptor R3 (1)
- P38398 (1)
- Interleukin-6 receptor subunit beta (1)
- Securin (1)
- Signal transducer and activator of transcription 3 (1)
- Signal transducer and activator of transcription 3 (1)
- Signal transducer and activator of transcription 5A (1)
- Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform (1)
- Serine/threonine-protein kinase mTOR (1)
- Caspase-3 (1)
- P42701 (1)
- Collagenase 3 (1)
- Dual specificity mitogen-activated protein kinase kinase 4 (1)
- Cyclin-dependent kinase inhibitor 1B (1)
- Dual specificity mitogen-activated protein kinase kinase 3 (1)
- Nucleolar protein NET1 (1)
- Mitotic check point protein BFA1 (1)
- Rap1 GTPase-activating protein 1 (1)
- Transcription factor SOX-9 (1)
- Segment polarity protein dishevelled homolog DVL-2 (1)
- P51449 (1)
- Nuclear receptor ROR-gamma (1)
- Interleukin-1 receptor-associated kinase 1 (1)
- Signal transducer and activator of transcription 5B (1)
- P52630 (1)
- APC/C activator protein CDH1 (1)
- T-cell leukemia/lymphoma protein 1A (1)
- C-X-C chemokine receptor type 4 (1)
- Ras-related protein R-Ras2 (1)
- Ras-related protein Rap-1A (1)
- P63104 (1)
- Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform (1)
- Adenomatous polyposis coli homolog (1)
- Transcription factor 7-like 1-A (1)
- P84022 (1)
- Protein phosphatase PP2A regulatory subunit B (1)
- Cyclin-dependent kinase 6 (1)
- Nuclear factor NF-kappa-B p100 subunit (1)
- Tyrosine-protein phosphatase CDC14 (1)
- Q00978 (1)
- E3 ubiquitin-protein ligase Mdm2 (1)
- Transcription factor E2F1 (1)
- Q01196 (1)
- Q01826 (1)
- Separin (1)
- Transcription factor p65 (1)
- Protein kinase C delta type (1)
- Tyrosine-protein phosphatase non-receptor type 11 (1)
- Apoptosis regulator BAX (1)
- Q08881 (1)
- Cell division cycle protein 20 homolog (1)
- TNF receptor-associated factor 2 (1)
- Nuclear factor of activated T-cells, cytoplasmic 3 (1)
- Lymphocyte cytosolic protein 2 (1)
- Mitogen-activated protein kinase kinase kinase 1 (1)
- S-phase kinase-associated protein 2 (1)
- Serine-protein kinase ATM (1)
- Q13469 (1)
- Serine/threonine-protein kinase ATR (1)
- Receptor-interacting serine/threonine-protein kinase 1 (1)
- GRB2-related adapter protein (1)
- Q13761 (1)
- Rap guanine nucleotide exchange factor 1 (1)
- Beclin-1 (1)
- Q14765 (1)
- Advanced glycosylation end product-specific receptor (1)
- Q15306 (1)
- Ribosomal protein S6 kinase alpha-1 (1)
- Tumor necrosis factor receptor type 1-associated DEATH domain protein (1)
- Mothers against decapentaplegic homolog 1 (1)
- Q16512 (1)
- Hsp90 co-chaperone Cdc37 (1)
- Q16552 (1)
- F-box/WD repeat-containing protein 1A (1)
- Acyl-coenzyme A thioesterase THEM4 (1)
- Q5VWK5 (1)
- Protein Wnt-11 (1)
- Rapamycin-insensitive companion of mTOR (1)
- Q75JK0 (1)
- Regulatory-associated protein of mTOR (1)
- TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 (1)
- Glycogen synthase kinase-3 beta (1)
- Q91854 (1)
- Bcl2-associated agonist of cell death (1)
- Q96GD4 (1)
- Q96PD4 (1)
- Mitogen-activated protein kinase kinase kinase 14 (1)
- Q99665 (1)
- Myeloid differentiation primary response protein MyD88 (1)
- Forkhead box protein P3 (1)
- Q9BZS1 (1)
- Q9HBE4 (1)
- Q9NPH3 (1)
- TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 (1)
- Programmed cell death 1 ligand 1 (1)
- Lymphoid enhancer-binding factor 1 (1)
- F-box/WD repeat-containing protein 11 (1)
- Q9UL17 (1)
- Q9UMW8 (1)
- A disintegrin and metalloproteinase with thrombospondin motifs 5 (1)
- TNF receptor-associated factor 6 (1)
- NF-kappa-B essential modulator (1)
- Tumor necrosis factor receptor superfamily member 11A (1)
- Axin-1 (1)
CHEBI
- iron cation (3)
- CHEBI:29034 (3)
- 0016618 (1)
- 0018348 (1)
- CHEBI:15343 (1)
- CHEBI:15361 (1)
- CHEBI:15422 (1)
- CHEBI:15846 (1)
- CHEBI:15996 (1)
- CHEBI:16001 (1)
- CHEBI:16027 (1)
- CHEBI:16084 (1)
- CHEBI:16108 (1)
- phospholipid (1)
- CHEBI:16526 (1)
- CHEBI:16618 (1)
- CHEBI:16761 (1)
- CHEBI:16908 (1)
- CHEBI:16991 (1)
- CHEBI:17552 (1)
- CHEBI:17665 (1)
- CHEBI:17754 (1)
- CHEBI:17794 (1)
- CHEBI:17823 (1)
- CHEBI:17835 (1)
- CHEBI:18021 (1)
- CHEBI:18348 (1)
- drug (1)
- lactone (1)
- CHEBI:26523 (1)
- CHEBI:28013 (1)
- CHEBI:28087 (1)
- CHEBI:28602 (1)
- CHEBI:29052 (1)
- CHEBI:29108 (1)
- CHEBI:30031 (1)
- antineoplastic agent (1)
- CHEBI:35780 (1)
- hydroxy monocarboxylic acid (1)
- CHEBI:4167 (1)
- pharmaceutical (1)
- apatite (1)
- topotecan (1)
- topoisomerase inhibitor (1)
- Thrombin (1)
- PATO:0002355 (1)
ENSEMBL
Search terms:
Found: 68 models Download Select all |
Bayleyegn2016 - interactions of CycE/Cdk2, Cdc25A, and P27 Kip1 in a core cancer subnetwork
ID: MODEL2003180002
|
Format: SBML |
Submitter: Krishna Kumar Tiwari |
Uploaded date: 18/03/2020 |
Last modified date: 18/03/2020
| Published in: 2020
Gidvani2012 - DNA replication initiation model in S. Cevevisiae
ID: MODEL2003180001
|
Format: SBML |
Submitter: Krishna Kumar Tiwari |
Uploaded date: 18/03/2020 |
Last modified date: 06/05/2020
| Published in: 2012
Novak1998 - Mathematical model of fission yeast cell cycle
ID: MODEL2003190004
|
Format: SBML |
Submitter: Krishna Kumar Tiwari |
Uploaded date: 19/03/2020 |
Last modified date: 19/03/2020
| Published in: 1998
Chiorino2002 - G1/S transition model
ID: MODEL2003180003
|
Format: SBML |
Submitter: Krishna Kumar Tiwari |
Uploaded date: 18/03/2020 |
Last modified date: 18/03/2020
| Published in: 2002
Vibert2017 - Tcell proliferation model
ID: MODEL2003170002
|
Format: SBML |
Submitter: Krishna Kumar Tiwari |
Uploaded date: 17/03/2020 |
Last modified date: 17/03/2020
| Published in: 2017
Starbuck1990 - EGF binding and trafficking dynamics in Fibroblast
ID: MODEL2003190005
|
Format: SBML |
Submitter: Krishna Kumar Tiwari |
Uploaded date: 19/03/2020 |
Last modified date: 19/03/2020
| Published in: 1990
Liu2017 - chemotherapy targeted model of tumor immune system
ID: BIOMD0000000930
|
Format: SBML |
Submitter: Krishna Kumar Tiwari |
Uploaded date: 06/04/2020 |
Last modified date: 06/04/2020
| Published in: 2020
Wu2017 - Murine Bevacizumab PK model
ID: MODEL2003030003
|
Format: SBML |
Submitter: Krishna Kumar Tiwari |
Uploaded date: 03/03/2020 |
Last modified date: 05/03/2020
| Published in: 2012
Back2018 - Mechanistic PK model of Fenofibrate
ID: MODEL2003030002
|
Format: SBML |
Submitter: Krishna Kumar Tiwari |
Uploaded date: 03/03/2020 |
Last modified date: 05/03/2020
| Published in: 2018
Malinzi2018 - Enhancement of chemotherapy using oncolytic virotherapy
ID: MODEL2003050002
|
Format: SBML |
Submitter: Krishna Kumar Tiwari |
Uploaded date: 05/03/2020 |
Last modified date: 05/03/2020
| Published in: 2018
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