Entity,Qualifiers,Preferred Ontologies,Value,Comments,DOME
model,NCBI Taxonomy,NCBI Taxonomy,https://identifiers.org/taxonomy/9606,Homo sapiens,
model,NCBI Taxonomy,NCBI Taxonomy,https://identifiers.org/taxonomy/10407,hepatitis B virus (HBV),
model,bqbiol:hasProperty,Experimental Factor Ontology EFO,https://identifiers.org/EFO:0004197,Hepatitis B virus infection,
model,bqbiol:hasProperty,Experimental Factor Ontology EFO,https://identifiers.org/EFO:0004239,chronic hepatitis B,
model,bqbiol:hasProperty,Experimental Factor Ontology EFO,https://identifiers.org/EFO:0005741,infectious disease,
model,bqbiol:hasProperty,BioAssay Ontology BAO,https://identifiers.org/BAO:0002305,QSAR,
model,bqbiol:hasProperty,Bioinformatics Concept EDAM,https://identifiers.org/bptl/edam:topic_0154,Small molecules,
model,bqbiol:hasProperty,NCI Thesaurus OBO Edition NCIT,https://identifiers.org/NCIT:C19146,In Vitro Model,
model,bqbiol:hasProperty,BioAssay Ontology BAO,https://identifiers.org/BAO:0000190,IC50,
model,bqbiol:hasProperty,Chemical Entities of Biological Interest CHEBI,https://identifiers.org/CHEBI:35222,Inhibitor,
model,bqbiol:hasProperty,Bioinformatics Concept EDAM,https://identifiers.org/bptl/edam:topic_3336,Drug discovery,
model,bqmodel:hasProperty,Bioinformatics Concept EDAM,https://identifiers.org/bptl/edam:topic_3474,Machine learning,
model,bqmodel:hasProperty,NCI Thesaurus OBO Edition NCIT,https://identifiers.org/NCIT:C16309,Artificial Intelligence,
model,bqmodel:hasProperty,NCI Thesaurus OBO Edition NCIT,https://identifiers.org/NCIT:C176260,natural language processing NLP,Optimization-Algorithm
model,bqmodel:hasProperty,NCI Thesaurus OBO Edition NCIT,https://identifiers.org/NCIT:C17429,neural network-based algorithm,Optimization-Algorithm
model,bqmodel:hasProperty,STATO: the statistical methods ontology,https://identifiers.org/STATO:0000031,binary classification,Optimization-Algorithm
model,bqmodel:hasProperty,STATO: the statistical methods ontology,https://identifiers.org/STATO:0000415,Accuracy,Evaluation-Performance Measure
model,bqmodel:hasProperty,STATO: the statistical methods ontology,https://identifiers.org/STATO:0000416,Precision,Evaluation-Performance Measure
model,bqmodel:hasProperty,STATO: the statistical methods ontology,https://identifiers.org/STATO:0000233,Recall,Evaluation-Performance Measure
model,bqmodel:hasProperty,STATO: the statistical methods ontology,https://identifiers.org/STATO:0000274,AUC–ROC,Evaluation-Performance Measure
model,bqmodel:hasProperty,Model Card Ontology MCRO,https://identifiers.org/MCRO:0000009,F1 score,Evaluation-Performance Measure
model,bqmodel:isDescribedBy,GitHub Repository,https://github.com/NTU-MedAI/S2DV,Source code,Model-Source code
model,bqmodel:isDescribedBy,Ersilia Model Hub,https://github.com/ersilia-os/eos8lok,Ersilia Incorporation URL,Model-Executable form
model,bqmodel:isDescribedBy,PubMed Identification Number PMID,https://identifiers.org/pubmed:35062019,PubMed URL,
model,bqbiol:hasInput,Chemical information ontology (cheminf),https://identifiers.org/CHEMINF:000018,Smiles descriptors,Data-Input
model,bqbiol:hasDataset,GitHub Repository,https://github.com/NTU-MedAI/S2DV,HBV inhibition data,Data-Source
model,bqbiol:hasOutput,Chemical Entities of Biological Interest CHEBI,https://identifiers.org/CHEBI:64951,anti-HBV compound,Model-Output; Classification
model,bqbiol:hasOutput,Medical Action Ontology MAXO,https://identifiers.org/MAXO:0000246,antihepatitis compounds,Model-Output; Classification
model,bqbiol:hasOutput,BioAssay Ontology BAO,https://identifiers.org/BAO:0000094,Viral growth inhibition,Model-Output; Classification