Merola2008 - An insight into tumor dormancy equilibrium via the analysis of its domain of attraction

  public model
Model Identifier
BIOMD0000000911
Short description
An insight into tumor dormancy equilibrium via the analysis of its domain of
attraction
A. Merola, C. Cosentino *, F. Amato
School of Computer and Biomedical Engineering, Universita` degli Studi Magna Græcia di Catanzaro, Campus ‘‘Salvatore Venuta’’, 88100 Catanzaro, Italy

A B S T R A C T
The trajectories of the dynamic system which regulates the competition between the populations of
malignant cells and immune cells may tend to an asymptotically stable equilibrium in which the sizes of
these populations do not vary, which is called tumor dormancy. Especially for lower steady-state sizes of
the population of malignant cells, this equilibrium represents a desirable clinical condition since the
tumor growth is blocked. In this context, it is of mandatory importance to analyze the robustness of this
clinical favorable state of health in the face of perturbations. To this end, the paper presents an
optimization technique to determine whether an assigned rectangular region, which surrounds an
asymptotically stable equilibrium point of a quadratic systems, is included into the domain of attraction
of the equilibrium itself. The biological relevance of the application of this technique to the analysis of
tumor growth dynamics is shown on the basis of a recent quadraticmodel of the tumor–immune system
competition dynamics. Indeed the application of the proposedmethodology allows to ensure that a given
safety region, determined on the basis of clinical considerations, belongs to the domain of attraction of
the tumor blocked equilibrium; therefore for the set of perturbed initial conditions which belong to such
region, the convergence to the healthy steady state is guaranteed. The proposed methodology can also
provide an optimal strategy for cancer treatment.
Format
SBML (L2V4)
Related Publication
  • An insight into tumor dormancy equilibrium via the analysis of its domain of attraction
  • A. Merola, C. Cosentino *, F. Amato
  • Biomedical Signal Processing and Control , 7/ 2008 , Volume 3 , Issue 3 , pages: 212-219 , DOI: 10.1016/j.bspc.2008.02.001
  • School of Computer and Biomedical Engineering, Universita` degli Studi Magna Græcia di Catanzaro, Campus ‘‘Salvatore Venuta’’, 88100 Catanzaro, Italy
  • A B S T R A C T The trajectories of the dynamic system which regulates the competition between the populations of malignant cells and immune cells may tend to an asymptotically stable equilibrium in which the sizes of these populations do not vary, which is called tumor dormancy. Especially for lower steady-state sizes of the population of malignant cells, this equilibrium represents a desirable clinical condition since the tumor growth is blocked. In this context, it is of mandatory importance to analyze the robustness of this clinical favorable state of health in the face of perturbations. To this end, the paper presents an optimization technique to determine whether an assigned rectangular region, which surrounds an asymptotically stable equilibrium point of a quadratic systems, is included into the domain of attraction of the equilibrium itself. The biological relevance of the application of this technique to the analysis of tumor growth dynamics is shown on the basis of a recent quadraticmodel of the tumor–immune system competition dynamics. Indeed the application of the proposedmethodology allows to ensure that a given safety region, determined on the basis of clinical considerations, belongs to the domain of attraction of the tumor blocked equilibrium; therefore for the set of perturbed initial conditions which belong to such region, the convergence to the healthy steady state is guaranteed. The proposed methodology can also provide an optimal strategy for cancer treatment.
Contributors
Submitter of the first revision: Mohammad Umer Sharif Shohan
Submitter of this revision: Mohammad Umer Sharif Shohan
Modellers: Mohammad Umer Sharif Shohan

Metadata information

is (2 statements)
BioModels Database BIOMD0000000911
BioModels Database MODEL2001150001

hasTaxon (1 statement)
Taxonomy Homo sapiens

hasProperty (1 statement)
Mathematical Modelling Ontology Ordinary differential equation model

isDescribedBy (1 statement)
isDerivedFrom (1 statement)
isVersionOf (1 statement)

Curation status
Curated



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Model files

Merola2008.xml SBML L2V4 Merola2008 - An insight into tumor dormancy equilibrium via the analysis of its domain of attraction 36.10 KB Preview | Download

Additional files

Merola2008.cps COPASI version 4.24 (Build 197) Merola2008 - An insight into tumor dormancy equilibrium via the analysis of its domain of attraction 65.90 KB Preview | Download
Merola2008.sedml SEDML L1V2 Merola2008 - An insight into tumor dormancy equilibrium via the analysis of its domain of attraction 2.65 KB Preview | Download

  • Model originally submitted by : Mohammad Umer Sharif Shohan
  • Submitted: Jan 15, 2020 3:56:38 PM
  • Last Modified: Jan 15, 2020 3:56:38 PM
Revisions
  • Version: 2 public model Download this version
    • Submitted on: Jan 15, 2020 3:56:38 PM
    • Submitted by: Mohammad Umer Sharif Shohan
    • With comment: Automatically added model identifier BIOMD0000000911
Legends
: Variable used inside SBML models


Species
Species Initial Concentration/Amount
M

Neoplastic Cell
2.5 mmol
N 1.5 mmol
Z 0.5 mmol
Reactions
Reactions Rate Parameters
M => ; N compartment*alpha*M*N alpha = 0.3
=> M compartment*(q+r*M*(1-M/k1)) r = 0.9; k1 = 0.8; q = 10.0
N => compartment*d1*N d1 = 0.02
=> Z compartment*s*Z*(1-Z/k2) k2 = 0.7; s = 0.8
=> N; Z compartment*beta*N*Z beta = 0.1
Z => ; N compartment*(beta*N*Z+d2*Z) beta = 0.1; d2 = 0.03
Curator's comment:
(added: 15 Jan 2020, 15:56:22, updated: 15 Jan 2020, 15:56:22)
The model has been encoded in COPASI 4.24 (Build 197) and the figure 1 of the publication has been produced using COPASI