Eftimie2010 - immunity to melanoma

  public model
Model Identifier
BIOMD0000000768
Short description
The paper describes a model of immunity to melanoma. Created by COPASI 4.25 (Build 207) This model is described in the article: Modeling anti-tumor Th1 and Th2 immunity in the rejection of melanoma Raluca Eftimie, Jonathan L. Bramson, David J.D. Earn Journal of Theoretical Biology 265 (2010) 467–480 Abstract: Recent experiments indicate that CD4+ Th2 cells can reject skin tumors in mice, while CD4+ Th1 cells cannot (Mattes et al., 2003; Zhang et al., 2009). These results are surprising because CD4+ Th1 cells are typically considered to be capable of tumor rejection. We used mathematical models to investigate this unexpected outcome. We found that neither CD4+ Th1 nor CD4+ Th2 cells could eliminate the cancer cells when acting alone, but that tumor elimination could be induced by recruitment of eosinophils by the Th2 cells. These recruited eosinophils had unexpected indirect effects on the decay rate of type 2 cytokines and the rate at which Th2 cells are inactivated through interactions with cancer cells. Strikingly, the presence of eosinophils impacted tumor growth more significantly than the release of tumor-suppressing cytokines such as IFN-g and TNF-a. Our simulations suggest that novel strategies to enhance eosinophil recruitment into skin tumors may improve cancer immunotherapies. To cite BioModels Database, please use: BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models . To the extent possible under law, all copyright and related or neighbouring rights to this encoded model have been dedicated to the public domain worldwide. Please refer to CC0 Public Domain Dedication for more information.
Format
SBML (L3V1)
Related Publication
  • Modeling anti-tumor Th1 and Th2 immunity in the rejection of melanoma.
  • Eftimie R, Bramson JL, Earn DJ
  • Journal of theoretical biology , 8/ 2010 , Volume 265 , Issue 3 , pages: 467-480 , PubMed ID: 20450922
  • Department of Mathematics and Statistics, McMaster University, Hamilton, ON, Canada L8S 4K1. reftimie@math.mcmaster.ca
  • Recent experiments indicate that CD4(+) Th2 cells can reject skin tumors in mice, while CD4(+) Th1 cells cannot (Mattes et al., 2003; Zhang et al., 2009). These results are surprising because CD4(+) Th1 cells are typically considered to be capable of tumor rejection. We used mathematical models to investigate this unexpected outcome. We found that neither CD4(+) Th1 nor CD4(+) Th2 cells could eliminate the cancer cells when acting alone, but that tumor elimination could be induced by recruitment of eosinophils by the Th2 cells. These recruited eosinophils had unexpected indirect effects on the decay rate of type 2 cytokines and the rate at which Th2 cells are inactivated through interactions with cancer cells. Strikingly, the presence of eosinophils impacted tumor growth more significantly than the release of tumor-suppressing cytokines such as IFN-gamma and TNF-alpha. Our simulations suggest that novel strategies to enhance eosinophil recruitment into skin tumors may improve cancer immunotherapies.
Contributors
Submitter of the first revision: Jinghao Men
Submitter of this revision: Jinghao Men
Modellers: Jinghao Men

Metadata information

is (2 statements)
BioModels Database BIOMD0000000768
BioModels Database MODEL1907300001

isDescribedBy (1 statement)
PubMed 20450922

hasTaxon (1 statement)
Taxonomy Homo sapiens

hasProperty (3 statements)
Mathematical Modelling Ontology Ordinary differential equation model
Gene Ontology immune response to tumor cell
Experimental Factor Ontology melanoma


Curation status
Curated



Connected external resources

SBGN view in Newt Editor

Name Description Size Actions

Model files

Eftimie2010.xml SBML L3V1 representation of melanoma immune model 94.72 KB Preview | Download

Additional files

Eftimie2010.cps CPS file of the model in COPASI 150.06 KB Preview | Download
Eftimie2010.sedml Auto-generated SEDML file 1.63 KB Preview | Download

  • Model originally submitted by : Jinghao Men
  • Submitted: Jul 30, 2019 3:26:30 PM
  • Last Modified: Jul 30, 2019 3:26:30 PM
Revisions
  • Version: 3 public model Download this version
    • Submitted on: Jul 30, 2019 3:26:30 PM
    • Submitted by: Jinghao Men
    • With comment: Automatically added model identifier BIOMD0000000768
Legends
: Variable used inside SBML models


Species
Species Initial Concentration/Amount
T

malignant cell
100000.0 mmol
Cp

Cytokine
0.0 mmol
C

Cytokine
0.0 mmol
Th

helper T cell
0.0 mmol
Cs

Cytokine
0.0 mmol
Reactions
Reactions Rate Parameters
=> T; Cp, Cs tme*atum*T*(1+kp*Cp)*(1-ktum*T)/(1+ks*Cs) atum = 0.514 1/d; kp = 1.0 1; ktum = 1.02E-9 1; ks = 1.0 1
Cp => tme*jtp*Cp jtp = 34.0 1/d
=> Cp; T tme*i3t*T^2/(h1^2+T^2) h1 = 1000000.0 1; i3t = 10.0 1/d
C => tme*j0*C j0 = 34.0 1/d
Th => ; T tme*dth*T*Th dth = 1.0E-7 1/d
Th => tme*cth*f cth = 0.1 1/d; f = 0.0 1
=> Cp; Th, T tme*(i31*Th+c)*T/(h2+T) h2 = 1000.0 1; i31 = 3.8E-4 1/d; c = 1.0 1/d
=> C; Th, T, Cp tme*(i11*Th+c)*T/((h2+T)*(1+kp*Cp)) kp = 1.0 1; h2 = 1000.0 1; i11 = 5.4 1/d; c = 1.0 1/d
T => ; Cs tme*gtum*Cs*T/(h0+T) h0 = 100000.0 1; gtum = 0.2 1/d
=> Cs; Th, T, Cp tme*(i21*Th+c)*T/((h2+T)*(1+kp*Cp)) kp = 1.0 1; h2 = 1000.0 1; i21 = 8.6 1/d; c = 1.0 1/d
Curator's comment:
(added: 30 Jul 2019, 15:26:18, updated: 30 Jul 2019, 15:26:18)
Publication figure 1 reproduced as per literature. Figure data is generated using COPASI 4.25 (build 197).