P-GSE15408-3 - P-GSE15408-3

Type
feature_extraction
Description
The software to generate the processed data was MAQ 6.3. The aligner was designed by Sanger (
). The command used to generate mapping: maq map -n 2 -m 0.001 -u unmapped_readsv2 -e 70 output_mappingv2.map total_kust.bfa s_7_sequence.bfq After that, the command to get human readable format: maq mapview output_mappingv2.map > output_mapping_s7_sequence In summary per position coverage was calculated for each contig and average coverage was calculated for each orf
Links
Experiment E-GEOD-15408