Source Name Characteristics [organism] Term Source REF Term Accession Number Characteristics[cell type] Characteristics [sex] Term Source REF Term Accession Number Characteristics [disease] Term Source REF Term Accession Number Characteristics[stimulus] Material Type Protocol REF Protocol REF Sample Name Protocol REF Extract Name Material Type Protocol REF Labeled Extract Name Label Material Type Protocol REF Term Source REF Assay Name Technology Type Array Design REF Protocol REF Term Source REF Scan Name Array Data File Comment [ArrayExpress FTP file] Protocol REF Derived Array Data Matrix File Comment [Derived ArrayExpress Data Matrix FTP file] Factor Value [disease] Factor Value[stimulus] Macrophage culture 40 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 normal none cell P-TABM-3905 P-TABM-3902 Macrophage culture 40 P-TABM-3903 GP2875u_040_F_68_H_U__SS511190_HG-U133_Plus_2_HCHP-258427_ total RNA P-TABM-3901 GP2875u_040_F_68_H_U__SS511190_HG-U133_Plus_2_HCHP-258427_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_040_F_68_H_U__SS511190_HG-U133_Plus_2_HCHP-258427_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_040_F_68_H_U__SS511190_HG-U133_Plus_2_HCHP-258427_ GP2875u_040_F_68_H_U__SS511190_HG-U133_Plus_2_HCHP-258427_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal none Macrophage culture 77 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 normal none cell P-TABM-3905 P-TABM-3902 Macrophage culture 77 P-TABM-3903 GP2875u_077_M_74_H_U__SS511192_HG-U133_Plus_2_HCHP-258466_ total RNA P-TABM-3901 GP2875u_077_M_74_H_U__SS511192_HG-U133_Plus_2_HCHP-258466_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_077_M_74_H_U__SS511192_HG-U133_Plus_2_HCHP-258466_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_077_M_74_H_U__SS511192_HG-U133_Plus_2_HCHP-258466_ GP2875u_077_M_74_H_U__SS511192_HG-U133_Plus_2_HCHP-258466_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal none Macrophage culture 72 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 normal none cell P-TABM-3905 P-TABM-3902 Macrophage culture 72 P-TABM-3903 GP2875u_072_F_81_H_U__SS511196_HG-U133_Plus_2_HCHP-258461_ total RNA P-TABM-3901 GP2875u_072_F_81_H_U__SS511196_HG-U133_Plus_2_HCHP-258461_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_072_F_81_H_U__SS511196_HG-U133_Plus_2_HCHP-258461_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_072_F_81_H_U__SS511196_HG-U133_Plus_2_HCHP-258461_ GP2875u_072_F_81_H_U__SS511196_HG-U133_Plus_2_HCHP-258461_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal none Macrophage culture 65 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 normal none cell P-TABM-3905 P-TABM-3902 Macrophage culture 65 P-TABM-3903 GP2875u_065_F_84_H_U__SS511197_HG-U133_Plus_2_HCHP-258454_ total RNA P-TABM-3901 GP2875u_065_F_84_H_U__SS511197_HG-U133_Plus_2_HCHP-258454_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_065_F_84_H_U__SS511197_HG-U133_Plus_2_HCHP-258454_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_065_F_84_H_U__SS511197_HG-U133_Plus_2_HCHP-258454_ GP2875u_065_F_84_H_U__SS511197_HG-U133_Plus_2_HCHP-258454_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal none Macrophage culture 6 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 normal none cell P-TABM-3905 P-TABM-3902 Macrophage culture 6 P-TABM-3903 GP2875u_006_F_66_H_U__SS511198_HG-U133_Plus_2_HCHP-258393_ total RNA P-TABM-3901 GP2875u_006_F_66_H_U__SS511198_HG-U133_Plus_2_HCHP-258393_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_006_F_66_H_U__SS511198_HG-U133_Plus_2_HCHP-258393_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_006_F_66_H_U__SS511198_HG-U133_Plus_2_HCHP-258393_ GP2875u_006_F_66_H_U__SS511198_HG-U133_Plus_2_HCHP-258393_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal none Macrophage culture 31 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 normal none cell P-TABM-3905 P-TABM-3902 Macrophage culture 31 P-TABM-3903 GP2875u_031_F_58_H_U__SS511189_HG-U133_Plus_2_HCHP-258418_ total RNA P-TABM-3901 GP2875u_031_F_58_H_U__SS511189_HG-U133_Plus_2_HCHP-258418_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_031_F_58_H_U__SS511189_HG-U133_Plus_2_HCHP-258418_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_031_F_58_H_U__SS511189_HG-U133_Plus_2_HCHP-258418_ GP2875u_031_F_58_H_U__SS511189_HG-U133_Plus_2_HCHP-258418_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal none Macrophage culture 14 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 normal none cell P-TABM-3905 P-TABM-3902 Macrophage culture 14 P-TABM-3903 GP2875u_014_M_77_H_U__SS511194_HG-U133_Plus_2_HCHP-258401_ total RNA P-TABM-3901 GP2875u_014_M_77_H_U__SS511194_HG-U133_Plus_2_HCHP-258401_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_014_M_77_H_U__SS511194_HG-U133_Plus_2_HCHP-258401_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_014_M_77_H_U__SS511194_HG-U133_Plus_2_HCHP-258401_ GP2875u_014_M_77_H_U__SS511194_HG-U133_Plus_2_HCHP-258401_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal none Macrophage culture 92 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 92 P-TABM-3903 GP2875u_092_F_87_U_U__SS511205_HG-U133_Plus_2_HCHP-258481_ total RNA P-TABM-3901 GP2875u_092_F_87_U_U__SS511205_HG-U133_Plus_2_HCHP-258481_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_092_F_87_U_U__SS511205_HG-U133_Plus_2_HCHP-258481_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_092_F_87_U_U__SS511205_HG-U133_Plus_2_HCHP-258481_ GP2875u_092_F_87_U_U__SS511205_HG-U133_Plus_2_HCHP-258481_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 76 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 76 P-TABM-3903 GP2875u_076_F_72_U_U__SS511201_HG-U133_Plus_2_HCHP-258465_ total RNA P-TABM-3901 GP2875u_076_F_72_U_U__SS511201_HG-U133_Plus_2_HCHP-258465_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_076_F_72_U_U__SS511201_HG-U133_Plus_2_HCHP-258465_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_076_F_72_U_U__SS511201_HG-U133_Plus_2_HCHP-258465_ GP2875u_076_F_72_U_U__SS511201_HG-U133_Plus_2_HCHP-258465_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 48 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 48 P-TABM-3903 GP2875u_048_F_64_U_U__SS511214_HG-U133_Plus_2_HCHP-258435_ total RNA P-TABM-3901 GP2875u_048_F_64_U_U__SS511214_HG-U133_Plus_2_HCHP-258435_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_048_F_64_U_U__SS511214_HG-U133_Plus_2_HCHP-258435_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_048_F_64_U_U__SS511214_HG-U133_Plus_2_HCHP-258435_ GP2875u_048_F_64_U_U__SS511214_HG-U133_Plus_2_HCHP-258435_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 71 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 71 P-TABM-3903 GP2875u_071_M_80_U_U__SS511202_HG-U133_Plus_2_HCHP-258460_ total RNA P-TABM-3901 GP2875u_071_M_80_U_U__SS511202_HG-U133_Plus_2_HCHP-258460_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_071_M_80_U_U__SS511202_HG-U133_Plus_2_HCHP-258460_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_071_M_80_U_U__SS511202_HG-U133_Plus_2_HCHP-258460_ GP2875u_071_M_80_U_U__SS511202_HG-U133_Plus_2_HCHP-258460_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 10 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 10 P-TABM-3903 GP2875u_010_F_89_U_U__SS511207_HG-U133_Plus_2_HCHP-258397_ total RNA P-TABM-3901 GP2875u_010_F_89_U_U__SS511207_HG-U133_Plus_2_HCHP-258397_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_010_F_89_U_U__SS511207_HG-U133_Plus_2_HCHP-258397_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_010_F_89_U_U__SS511207_HG-U133_Plus_2_HCHP-258397_ GP2875u_010_F_89_U_U__SS511207_HG-U133_Plus_2_HCHP-258397_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 58 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 58 P-TABM-3903 GP2875u_058_F_70_U_U__SS511218_HG-U133_Plus_2_HCHP-258447_ total RNA P-TABM-3901 GP2875u_058_F_70_U_U__SS511218_HG-U133_Plus_2_HCHP-258447_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_058_F_70_U_U__SS511218_HG-U133_Plus_2_HCHP-258447_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_058_F_70_U_U__SS511218_HG-U133_Plus_2_HCHP-258447_ GP2875u_058_F_70_U_U__SS511218_HG-U133_Plus_2_HCHP-258447_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 95 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 95 P-TABM-3903 GP2875u_095_M_69_U_U__SS511217_HG-U133_Plus_2_HCHP-258484_ total RNA P-TABM-3901 GP2875u_095_M_69_U_U__SS511217_HG-U133_Plus_2_HCHP-258484_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_095_M_69_U_U__SS511217_HG-U133_Plus_2_HCHP-258484_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_095_M_69_U_U__SS511217_HG-U133_Plus_2_HCHP-258484_ GP2875u_095_M_69_U_U__SS511217_HG-U133_Plus_2_HCHP-258484_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 39 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 39 P-TABM-3903 GP2875u_039_M_59_U_U__SS511209_HG-U133_Plus_2_HCHP-258426_ total RNA P-TABM-3901 GP2875u_039_M_59_U_U__SS511209_HG-U133_Plus_2_HCHP-258426_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_039_M_59_U_U__SS511209_HG-U133_Plus_2_HCHP-258426_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_039_M_59_U_U__SS511209_HG-U133_Plus_2_HCHP-258426_ GP2875u_039_M_59_U_U__SS511209_HG-U133_Plus_2_HCHP-258426_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 67 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 67 P-TABM-3903 GP2875u_067_M_61_U_U__SS511211_HG-U133_Plus_2_HCHP-258456_ total RNA P-TABM-3901 GP2875u_067_M_61_U_U__SS511211_HG-U133_Plus_2_HCHP-258456_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_067_M_61_U_U__SS511211_HG-U133_Plus_2_HCHP-258456_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_067_M_61_U_U__SS511211_HG-U133_Plus_2_HCHP-258456_ GP2875u_067_M_61_U_U__SS511211_HG-U133_Plus_2_HCHP-258456_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.1.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 37 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 37 P-TABM-3903 GP2875u_037_M_65_U_U__SS511215_HG-U133_Plus_2_HCHP-258424_ total RNA P-TABM-3901 GP2875u_037_M_65_U_U__SS511215_HG-U133_Plus_2_HCHP-258424_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_037_M_65_U_U__SS511215_HG-U133_Plus_2_HCHP-258424_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_037_M_65_U_U__SS511215_HG-U133_Plus_2_HCHP-258424_ GP2875u_037_M_65_U_U__SS511215_HG-U133_Plus_2_HCHP-258424_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 4 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 4 P-TABM-3903 GP2875u_004_F_63_U_U__SS511213_HG-U133_Plus_2_HCHP-258391_ total RNA P-TABM-3901 GP2875u_004_F_63_U_U__SS511213_HG-U133_Plus_2_HCHP-258391_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_004_F_63_U_U__SS511213_HG-U133_Plus_2_HCHP-258391_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_004_F_63_U_U__SS511213_HG-U133_Plus_2_HCHP-258391_ GP2875u_004_F_63_U_U__SS511213_HG-U133_Plus_2_HCHP-258391_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 50 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 50 P-TABM-3903 GP2875u_050_F_67_U_U__SS511216_HG-U133_Plus_2_HCHP-258437_ total RNA P-TABM-3901 GP2875u_050_F_67_U_U__SS511216_HG-U133_Plus_2_HCHP-258437_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_050_F_67_U_U__SS511216_HG-U133_Plus_2_HCHP-258437_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_050_F_67_U_U__SS511216_HG-U133_Plus_2_HCHP-258437_ GP2875u_050_F_67_U_U__SS511216_HG-U133_Plus_2_HCHP-258437_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 3 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 3 P-TABM-3903 GP2875u_003_M_62_U_U__SS511212_HG-U133_Plus_2_HCHP-258390_ total RNA P-TABM-3901 GP2875u_003_M_62_U_U__SS511212_HG-U133_Plus_2_HCHP-258390_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_003_M_62_U_U__SS511212_HG-U133_Plus_2_HCHP-258390_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_003_M_62_U_U__SS511212_HG-U133_Plus_2_HCHP-258390_ GP2875u_003_M_62_U_U__SS511212_HG-U133_Plus_2_HCHP-258390_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 41 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 41 P-TABM-3903 GP2875u_041_F_60_U_U__SS511210_HG-U133_Plus_2_HCHP-258428_ total RNA P-TABM-3901 GP2875u_041_F_60_U_U__SS511210_HG-U133_Plus_2_HCHP-258428_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_041_F_60_U_U__SS511210_HG-U133_Plus_2_HCHP-258428_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_041_F_60_U_U__SS511210_HG-U133_Plus_2_HCHP-258428_ GP2875u_041_F_60_U_U__SS511210_HG-U133_Plus_2_HCHP-258428_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 64 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 64 P-TABM-3903 GP2875u_064_F_86_U_U__SS511204_HG-U133_Plus_2_HCHP-258453_ total RNA P-TABM-3901 GP2875u_064_F_86_U_U__SS511204_HG-U133_Plus_2_HCHP-258453_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_064_F_86_U_U__SS511204_HG-U133_Plus_2_HCHP-258453_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_064_F_86_U_U__SS511204_HG-U133_Plus_2_HCHP-258453_ GP2875u_064_F_86_U_U__SS511204_HG-U133_Plus_2_HCHP-258453_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 73 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 73 P-TABM-3903 GP2875u_073_F_90_U_U__SS511208_HG-U133_Plus_2_HCHP-258462_ total RNA P-TABM-3901 GP2875u_073_F_90_U_U__SS511208_HG-U133_Plus_2_HCHP-258462_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_073_F_90_U_U__SS511208_HG-U133_Plus_2_HCHP-258462_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_073_F_90_U_U__SS511208_HG-U133_Plus_2_HCHP-258462_ GP2875u_073_F_90_U_U__SS511208_HG-U133_Plus_2_HCHP-258462_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 59 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 59 P-TABM-3903 GP2875u_059_M_82_U_U__SS511203_HG-U133_Plus_2_HCHP-258448_ total RNA P-TABM-3901 GP2875u_059_M_82_U_U__SS511203_HG-U133_Plus_2_HCHP-258448_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_059_M_82_U_U__SS511203_HG-U133_Plus_2_HCHP-258448_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_059_M_82_U_U__SS511203_HG-U133_Plus_2_HCHP-258448_ GP2875u_059_M_82_U_U__SS511203_HG-U133_Plus_2_HCHP-258448_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 43 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 43 P-TABM-3903 GP2875u_043_F_88_U_U__SS511206_HG-U133_Plus_2_HCHP-258430_ total RNA P-TABM-3901 GP2875u_043_F_88_U_U__SS511206_HG-U133_Plus_2_HCHP-258430_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_043_F_88_U_U__SS511206_HG-U133_Plus_2_HCHP-258430_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_043_F_88_U_U__SS511206_HG-U133_Plus_2_HCHP-258430_ GP2875u_043_F_88_U_U__SS511206_HG-U133_Plus_2_HCHP-258430_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 83 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 none cell P-TABM-3905 P-TABM-3902 Macrophage culture 83 P-TABM-3903 GP2875u_083_F_75_U_U__SS511199_HG-U133_Plus_2_HCHP-258472_ total RNA P-TABM-3901 GP2875u_083_F_75_U_U__SS511199_HG-U133_Plus_2_HCHP-258472_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_083_F_75_U_U__SS511199_HG-U133_Plus_2_HCHP-258472_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_083_F_75_U_U__SS511199_HG-U133_Plus_2_HCHP-258472_ GP2875u_083_F_75_U_U__SS511199_HG-U133_Plus_2_HCHP-258472_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis none Macrophage culture 9 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 normal heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 9 P-TABM-3903 GP2875u_009_F_66_H_E__SS511233_HG-U133_Plus_2_HCHP-258396_ total RNA P-TABM-3901 GP2875u_009_F_66_H_E__SS511233_HG-U133_Plus_2_HCHP-258396_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_009_F_66_H_E__SS511233_HG-U133_Plus_2_HCHP-258396_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_009_F_66_H_E__SS511233_HG-U133_Plus_2_HCHP-258396_ GP2875u_009_F_66_H_E__SS511233_HG-U133_Plus_2_HCHP-258396_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal heat-killed Escherichia coli Macrophage culture 78 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 normal heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 78 P-TABM-3903 GP2875u_078_F_84_H_E__SS511232_HG-U133_Plus_2_HCHP-258467_ total RNA P-TABM-3901 GP2875u_078_F_84_H_E__SS511232_HG-U133_Plus_2_HCHP-258467_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_078_F_84_H_E__SS511232_HG-U133_Plus_2_HCHP-258467_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_078_F_84_H_E__SS511232_HG-U133_Plus_2_HCHP-258467_ GP2875u_078_F_84_H_E__SS511232_HG-U133_Plus_2_HCHP-258467_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal heat-killed Escherichia coli Macrophage culture 46 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 normal heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 46 P-TABM-3903 GP2875u_046_M_77_H_E__SS511229_HG-U133_Plus_2_HCHP-258433_ total RNA P-TABM-3901 GP2875u_046_M_77_H_E__SS511229_HG-U133_Plus_2_HCHP-258433_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_046_M_77_H_E__SS511229_HG-U133_Plus_2_HCHP-258433_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_046_M_77_H_E__SS511229_HG-U133_Plus_2_HCHP-258433_ GP2875u_046_M_77_H_E__SS511229_HG-U133_Plus_2_HCHP-258433_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal heat-killed Escherichia coli Macrophage culture 1 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 normal heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 1 P-TABM-3903 GP2875u_001_F_58_H_E__SS511224_HG-U133_Plus_2_HCHP-258388_ total RNA P-TABM-3901 GP2875u_001_F_58_H_E__SS511224_HG-U133_Plus_2_HCHP-258388_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_001_F_58_H_E__SS511224_HG-U133_Plus_2_HCHP-258388_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_001_F_58_H_E__SS511224_HG-U133_Plus_2_HCHP-258388_ GP2875u_001_F_58_H_E__SS511224_HG-U133_Plus_2_HCHP-258388_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal heat-killed Escherichia coli Macrophage culture 13 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 normal heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 13 P-TABM-3903 GP2875u_013_F_68_H_E__SS511225_HG-U133_Plus_2_HCHP-258400_ total RNA P-TABM-3901 GP2875u_013_F_68_H_E__SS511225_HG-U133_Plus_2_HCHP-258400_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_013_F_68_H_E__SS511225_HG-U133_Plus_2_HCHP-258400_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_013_F_68_H_E__SS511225_HG-U133_Plus_2_HCHP-258400_ GP2875u_013_F_68_H_E__SS511225_HG-U133_Plus_2_HCHP-258400_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip normal heat-killed Escherichia coli Macrophage culture 93 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 93 P-TABM-3903 GP2875u_093_F_90_U_E__SS511243_HG-U133_Plus_2_HCHP-258482_ total RNA P-TABM-3901 GP2875u_093_F_90_U_E__SS511243_HG-U133_Plus_2_HCHP-258482_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_093_F_90_U_E__SS511243_HG-U133_Plus_2_HCHP-258482_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_093_F_90_U_E__SS511243_HG-U133_Plus_2_HCHP-258482_ GP2875u_093_F_90_U_E__SS511243_HG-U133_Plus_2_HCHP-258482_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 52 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 52 P-TABM-3903 GP2875u_052_F_87_U_E__SS511240_HG-U133_Plus_2_HCHP-258441_ total RNA P-TABM-3901 GP2875u_052_F_87_U_E__SS511240_HG-U133_Plus_2_HCHP-258441_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_052_F_87_U_E__SS511240_HG-U133_Plus_2_HCHP-258441_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_052_F_87_U_E__SS511240_HG-U133_Plus_2_HCHP-258441_ GP2875u_052_F_87_U_E__SS511240_HG-U133_Plus_2_HCHP-258441_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.2.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 75 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 75 P-TABM-3903 GP2875u_075_M_80_U_E__SS511237_HG-U133_Plus_2_HCHP-258464_ total RNA P-TABM-3901 GP2875u_075_M_80_U_E__SS511237_HG-U133_Plus_2_HCHP-258464_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_075_M_80_U_E__SS511237_HG-U133_Plus_2_HCHP-258464_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_075_M_80_U_E__SS511237_HG-U133_Plus_2_HCHP-258464_ GP2875u_075_M_80_U_E__SS511237_HG-U133_Plus_2_HCHP-258464_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 20 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 20 P-TABM-3903 GP2875u_020_M_59_U_E__SS511244_HG-U133_Plus_2_HCHP-258407_ total RNA P-TABM-3901 GP2875u_020_M_59_U_E__SS511244_HG-U133_Plus_2_HCHP-258407_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_020_M_59_U_E__SS511244_HG-U133_Plus_2_HCHP-258407_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_020_M_59_U_E__SS511244_HG-U133_Plus_2_HCHP-258407_ GP2875u_020_M_59_U_E__SS511244_HG-U133_Plus_2_HCHP-258407_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 68 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 68 P-TABM-3903 GP2875u_068_F_72_U_E__SS511236_HG-U133_Plus_2_HCHP-258457_ total RNA P-TABM-3901 GP2875u_068_F_72_U_E__SS511236_HG-U133_Plus_2_HCHP-258457_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_068_F_72_U_E__SS511236_HG-U133_Plus_2_HCHP-258457_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_068_F_72_U_E__SS511236_HG-U133_Plus_2_HCHP-258457_ GP2875u_068_F_72_U_E__SS511236_HG-U133_Plus_2_HCHP-258457_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 56 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 56 P-TABM-3903 GP2875u_056_F_75_U_E__SS511234_HG-U133_Plus_2_HCHP-258445_ total RNA P-TABM-3901 GP2875u_056_F_75_U_E__SS511234_HG-U133_Plus_2_HCHP-258445_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_056_F_75_U_E__SS511234_HG-U133_Plus_2_HCHP-258445_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_056_F_75_U_E__SS511234_HG-U133_Plus_2_HCHP-258445_ GP2875u_056_F_75_U_E__SS511234_HG-U133_Plus_2_HCHP-258445_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 17 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 17 P-TABM-3903 GP2875u_017_M_65_U_E__SS511250_HG-U133_Plus_2_HCHP-258404_ total RNA P-TABM-3901 GP2875u_017_M_65_U_E__SS511250_HG-U133_Plus_2_HCHP-258404_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_017_M_65_U_E__SS511250_HG-U133_Plus_2_HCHP-258404_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_017_M_65_U_E__SS511250_HG-U133_Plus_2_HCHP-258404_ GP2875u_017_M_65_U_E__SS511250_HG-U133_Plus_2_HCHP-258404_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 25 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 25 P-TABM-3903 GP2875u_025_F_67_U_E__SS511251_HG-U133_Plus_2_HCHP-258412_ total RNA P-TABM-3901 GP2875u_025_F_67_U_E__SS511251_HG-U133_Plus_2_HCHP-258412_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_025_F_67_U_E__SS511251_HG-U133_Plus_2_HCHP-258412_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_025_F_67_U_E__SS511251_HG-U133_Plus_2_HCHP-258412_ GP2875u_025_F_67_U_E__SS511251_HG-U133_Plus_2_HCHP-258412_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 34 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 34 P-TABM-3903 GP2875u_034_M_62_U_E__SS511247_HG-U133_Plus_2_HCHP-258421_ total RNA P-TABM-3901 GP2875u_034_M_62_U_E__SS511247_HG-U133_Plus_2_HCHP-258421_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_034_M_62_U_E__SS511247_HG-U133_Plus_2_HCHP-258421_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_034_M_62_U_E__SS511247_HG-U133_Plus_2_HCHP-258421_ GP2875u_034_M_62_U_E__SS511247_HG-U133_Plus_2_HCHP-258421_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 15 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 15 P-TABM-3903 GP2875u_015_F_60_U_E__SS511245_HG-U133_Plus_2_HCHP-258402_ total RNA P-TABM-3901 GP2875u_015_F_60_U_E__SS511245_HG-U133_Plus_2_HCHP-258402_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_015_F_60_U_E__SS511245_HG-U133_Plus_2_HCHP-258402_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_015_F_60_U_E__SS511245_HG-U133_Plus_2_HCHP-258402_ GP2875u_015_F_60_U_E__SS511245_HG-U133_Plus_2_HCHP-258402_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 28 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 28 P-TABM-3903 GP2875u_028_F_89_U_E__SS511242_HG-U133_Plus_2_HCHP-258415_ total RNA P-TABM-3901 GP2875u_028_F_89_U_E__SS511242_HG-U133_Plus_2_HCHP-258415_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_028_F_89_U_E__SS511242_HG-U133_Plus_2_HCHP-258415_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_028_F_89_U_E__SS511242_HG-U133_Plus_2_HCHP-258415_ GP2875u_028_F_89_U_E__SS511242_HG-U133_Plus_2_HCHP-258415_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 94 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 94 P-TABM-3903 GP2875u_094_M_82_U_E__SS511238_HG-U133_Plus_2_HCHP-258483_ total RNA P-TABM-3901 GP2875u_094_M_82_U_E__SS511238_HG-U133_Plus_2_HCHP-258483_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_094_M_82_U_E__SS511238_HG-U133_Plus_2_HCHP-258483_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_094_M_82_U_E__SS511238_HG-U133_Plus_2_HCHP-258483_ GP2875u_094_M_82_U_E__SS511238_HG-U133_Plus_2_HCHP-258483_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 55 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 55 P-TABM-3903 GP2875u_055_F_86_U_E__SS511239_HG-U133_Plus_2_HCHP-258444_ total RNA P-TABM-3901 GP2875u_055_F_86_U_E__SS511239_HG-U133_Plus_2_HCHP-258444_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_055_F_86_U_E__SS511239_HG-U133_Plus_2_HCHP-258444_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_055_F_86_U_E__SS511239_HG-U133_Plus_2_HCHP-258444_ GP2875u_055_F_86_U_E__SS511239_HG-U133_Plus_2_HCHP-258444_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 18 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 18 P-TABM-3903 GP2875u_018_F_64_U_E__SS511249_HG-U133_Plus_2_HCHP-258405_ total RNA P-TABM-3901 GP2875u_018_F_64_U_E__SS511249_HG-U133_Plus_2_HCHP-258405_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_018_F_64_U_E__SS511249_HG-U133_Plus_2_HCHP-258405_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_018_F_64_U_E__SS511249_HG-U133_Plus_2_HCHP-258405_ GP2875u_018_F_64_U_E__SS511249_HG-U133_Plus_2_HCHP-258405_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 90 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 90 P-TABM-3903 GP2875u_090_F_70_U_E__SS511253_HG-U133_Plus_2_HCHP-258479_ total RNA P-TABM-3901 GP2875u_090_F_70_U_E__SS511253_HG-U133_Plus_2_HCHP-258479_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_090_F_70_U_E__SS511253_HG-U133_Plus_2_HCHP-258479_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_090_F_70_U_E__SS511253_HG-U133_Plus_2_HCHP-258479_ GP2875u_090_F_70_U_E__SS511253_HG-U133_Plus_2_HCHP-258479_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 8 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 8 P-TABM-3903 GP2875u_008_F_63_U_E__SS511248_HG-U133_Plus_2_HCHP-258395_ total RNA P-TABM-3901 GP2875u_008_F_63_U_E__SS511248_HG-U133_Plus_2_HCHP-258395_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_008_F_63_U_E__SS511248_HG-U133_Plus_2_HCHP-258395_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_008_F_63_U_E__SS511248_HG-U133_Plus_2_HCHP-258395_ GP2875u_008_F_63_U_E__SS511248_HG-U133_Plus_2_HCHP-258395_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 85 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 85 P-TABM-3903 GP2875u_085_F_56_U_E__SS511235_HG-U133_Plus_2_HCHP-258474_ total RNA P-TABM-3901 GP2875u_085_F_56_U_E__SS511235_HG-U133_Plus_2_HCHP-258474_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_085_F_56_U_E__SS511235_HG-U133_Plus_2_HCHP-258474_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_085_F_56_U_E__SS511235_HG-U133_Plus_2_HCHP-258474_ GP2875u_085_F_56_U_E__SS511235_HG-U133_Plus_2_HCHP-258474_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 100 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 100 P-TABM-3903 GP2875u_100_M_61_U_E__SS511246_HG-U133_Plus_2_HCHP-258489_ total RNA P-TABM-3901 GP2875u_100_M_61_U_E__SS511246_HG-U133_Plus_2_HCHP-258489_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_100_M_61_U_E__SS511246_HG-U133_Plus_2_HCHP-258489_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_100_M_61_U_E__SS511246_HG-U133_Plus_2_HCHP-258489_ GP2875u_100_M_61_U_E__SS511246_HG-U133_Plus_2_HCHP-258489_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 30 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage female EFO EFO_0001265 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 30 P-TABM-3903 GP2875u_030_F_88_U_E__SS511241_HG-U133_Plus_2_HCHP-258417_ total RNA P-TABM-3901 GP2875u_030_F_88_U_E__SS511241_HG-U133_Plus_2_HCHP-258417_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_030_F_88_U_E__SS511241_HG-U133_Plus_2_HCHP-258417_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_030_F_88_U_E__SS511241_HG-U133_Plus_2_HCHP-258417_ GP2875u_030_F_88_U_E__SS511241_HG-U133_Plus_2_HCHP-258417_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.3.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli Macrophage culture 79 Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 primary macrophage male EFO EFO_0001266 ulcerative colitis EFO EFO_0000729 heat-killed Escherichia coli cell P-TABM-3900 P-TABM-3902 Macrophage culture 79 P-TABM-3903 GP2875u_079_M_69_U_E__SS511252_HG-U133_Plus_2_HCHP-258468_ total RNA P-TABM-3901 GP2875u_079_M_69_U_E__SS511252_HG-U133_Plus_2_HCHP-258468_ biotin synthetic RNA P-MTAB-87957 ArrayExpress GP2875u_079_M_69_U_E__SS511252_HG-U133_Plus_2_HCHP-258468_ array assay A-AFFY-44 P-AFFY-6 ArrayExpress GP2875u_079_M_69_U_E__SS511252_HG-U133_Plus_2_HCHP-258468_ GP2875u_079_M_69_U_E__SS511252_HG-U133_Plus_2_HCHP-258468_.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.raw.4.zip P-TABM-3904 Experiment2_gcRMA_Log2_upload.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/TABM/E-TABM-734/E-TABM-734.processed.1.zip ulcerative colitis heat-killed Escherichia coli