Investigation Title	Transcription profiling of human normal, Barrets esophagus, duodenum and adenocarcinoma samples	
Comment[Submitted Name]	Hao_et_al_array samples( Normal.barrett, duodenum and adenocarcinoma)	
Experimental Design	disease_state_design	transcription profiling by array	
Experimental Design Term Source REF	mo	EFO	
Comment[ArrayExpressReleaseDate]	2006-11-13	
Comment[AEMIAMESCORE]	3	
Comment[ArrayExpressAccession]	E-SMDB-3834	
Comment[MAGETAB TimeStamp_Version]	2011-01-23 15:47:41 Last Changed Rev: 14857	
Experimental Factor Name	
Experimental Factor Type	
Experimental Factor Term Source REF	
Person Last Name	Demeter	Hao	
Person First Name	Janos	Ying	
Person Mid Initials	
Person Email	jdemeter@genome.stanford.edu	yhao@stanford.edu	
Person Phone	726-0075	5-3372	
Person Fax	723-7016	3-5488	
Person Address	Dept. Genetics, CCSR 2255, Stanford, CA, USA, 94305	Gastroenterology, 3120 CCSR, 269 Campus Dr., Palo Alto, CA, USA, 94305	
Person Affiliation	Stanford University	Lowe lab	
Person Roles	submitter	submitter	
Person Roles Term Source REF	mo		
Quality Control Type	
Quality Control Term Source REF	
Replicate Type	
Replicate Term Source REF	
Normalization Type	
Normalization Term Source REF	
Date of Experiment	
Public Release Date	2006-11-13	
PubMed ID	16952561	
Publication DOI	16952561	
Publication Author List	Hao Y, Triadafilopoulos G, Sahbaie P, Young HS, Omary MB, Lowe AW	
Publication Title	Gene Expression Profiling Reveals Stromal Genes Expressed in Common Between Barrett	
Publication Status	journal_article	
Publication Status Term Source REF	
Experiment Description	samples contain normal, Berret and duodenum and adenocarcinoma	
Protocol Name	URN:LSID:smd.stanford.edu:tagset.tagset\_no:25/MAGE.Protocol	
Protocol Type	feature_extraction	
Protocol Description	Title: Feature Extraction. Description: Software and parameters for feature extraction.	
Protocol Parameters	Image Origin;Datafile type;	
Protocol Hardware	
Protocol Software	
Protocol Contact	
Protocol Term Source REF	
SDRF File	E-SMDB-3834.sdrf.txt	
Term Source Name	ncbitax	mo	ArrayExpress	mo	EFO	
Term Source File	http://www.ncbi.nlm.nih.gov/Taxonomy/taxonomyhome.html	http://mged.sourceforge.net/ontologies/MGEDontology.php	http://www.ebi.ac.uk/arrayexpress	http://mged.sourceforge.net/ontologies/MGEDontology.php	http://www.ebi.ac.uk/efo/	
Term Source Version