Source Name	Comment[ENA_SAMPLE]	Comment[BioSD_SAMPLE]	Characteristics[organism]	Characteristics[strain]	Characteristics[developmental stage]	Characteristics[sex]	Characteristics[organism part]	Characteristics[cell type]	Characteristics[treatment]	Material Type	Protocol REF	Performer	Protocol REF	Performer	Protocol REF	Performer	Extract Name	Comment[LIBRARY_LAYOUT]	Comment[LIBRARY_SELECTION]	Comment[LIBRARY_SOURCE]	Comment[LIBRARY_STRATEGY]	Comment[NOMINAL_LENGTH]	Comment[NOMINAL_SDEV]	Protocol REF	Performer	Assay Name	Technology Type	Comment[ENA_EXPERIMENT]	Scan Name	Comment[SUBMITTED_FILE_NAME]	Comment[ENA_RUN]	Comment[FASTQ_URI]	Factor Value[infect]	Factor Value[time]	Unit[time unit]	Term Source REF	Term Accession Number	Factor Value[treatment]
Sample 1 (repeat 1)	ERS4847475	SAMEA7086886	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	none	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 1 (repeat 1)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 1 (repeat 1)	sequencing assay	ERX4312818	JE1804D1_R1.fastq.gz	JE1804D1_R1.fastq.gz	ERR4368613	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/003/ERR4368613/ERR4368613_1.fastq.gz	none	0	day	EFO	UO_0000033	none
Sample 1 (repeat 1)	ERS4847475	SAMEA7086886	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	none	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 1 (repeat 1)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 1 (repeat 1)	sequencing assay	ERX4312818	JE1804D1_R2.fastq.gz	JE1804D1_R2.fastq.gz	ERR4368613	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/003/ERR4368613/ERR4368613_2.fastq.gz	none	0	day	EFO	UO_0000033	none
Sample 1 (repeat 2)	ERS4847476	SAMEA7086887	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	none	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 1 (repeat 2)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 1 (repeat 2)	sequencing assay	ERX4312819	JE1806D1_R1.fastq.gz	JE1806D1_R1.fastq.gz	ERR4368614	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/004/ERR4368614/ERR4368614_1.fastq.gz	none	0	day	EFO	UO_0000033	none
Sample 1 (repeat 2)	ERS4847476	SAMEA7086887	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	none	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 1 (repeat 2)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 1 (repeat 2)	sequencing assay	ERX4312819	JE1806D1_R2.fastq.gz	JE1806D1_R2.fastq.gz	ERR4368614	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/004/ERR4368614/ERR4368614_2.fastq.gz	none	0	day	EFO	UO_0000033	none
Sample 2 (repeat 1)	ERS4847477	SAMEA7086888	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	none	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 2 (repeat 1)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 2 (repeat 1)	sequencing assay	ERX4312820	JE1804D7_R1.fastq.gz	JE1804D7_R1.fastq.gz	ERR4368615	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/005/ERR4368615/ERR4368615_1.fastq.gz	Plasmodium chabaudi chabaudi AS	7	day	EFO	UO_0000033	none
Sample 2 (repeat 1)	ERS4847477	SAMEA7086888	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	none	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 2 (repeat 1)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 2 (repeat 1)	sequencing assay	ERX4312820	JE1804D7_R2.fastq.gz	JE1804D7_R2.fastq.gz	ERR4368615	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/005/ERR4368615/ERR4368615_2.fastq.gz	Plasmodium chabaudi chabaudi AS	7	day	EFO	UO_0000033	none
Sample 2 (repeat 2)	ERS4847478	SAMEA7086889	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	none	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 2 (repeat 2)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 2 (repeat 2)	sequencing assay	ERX4312821	JE1806D7_R1.fastq.gz	JE1806D7_R1.fastq.gz	ERR4368616	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/006/ERR4368616/ERR4368616_1.fastq.gz	Plasmodium chabaudi chabaudi AS	7	day	EFO	UO_0000033	none
Sample 2 (repeat 2)	ERS4847478	SAMEA7086889	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	none	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 2 (repeat 2)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 2 (repeat 2)	sequencing assay	ERX4312821	JE1806D7_R2.fastq.gz	JE1806D7_R2.fastq.gz	ERR4368616	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/006/ERR4368616/ERR4368616_2.fastq.gz	Plasmodium chabaudi chabaudi AS	7	day	EFO	UO_0000033	none
Sample 3 (repeat 1)	ERS4847479	SAMEA7086890	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	saline	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 3 (repeat 1)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 3 (repeat 1)	sequencing assay	ERX4312822	JE1804D28SAL_R1.fastq.gz	JE1804D28SAL_R1.fastq.gz	ERR4368617	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/007/ERR4368617/ERR4368617_1.fastq.gz	Plasmodium chabaudi chabaudi AS	28	day	EFO	UO_0000033	saline
Sample 3 (repeat 1)	ERS4847479	SAMEA7086890	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	saline	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 3 (repeat 1)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 3 (repeat 1)	sequencing assay	ERX4312822	JE1804D28SAL_R2.fastq.gz	JE1804D28SAL_R2.fastq.gz	ERR4368617	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/007/ERR4368617/ERR4368617_2.fastq.gz	Plasmodium chabaudi chabaudi AS	28	day	EFO	UO_0000033	saline
Sample 3 (repeat 2)	ERS4847480	SAMEA7086891	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	saline	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 3 (repeat 2)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 3 (repeat 2)	sequencing assay	ERX4312823	JE1806D28SAL_R1.fastq.gz	JE1806D28SAL_R1.fastq.gz	ERR4368618	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/008/ERR4368618/ERR4368618_1.fastq.gz	Plasmodium chabaudi chabaudi AS	28	day	EFO	UO_0000033	saline
Sample 3 (repeat 2)	ERS4847480	SAMEA7086891	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	saline	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 3 (repeat 2)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 3 (repeat 2)	sequencing assay	ERX4312823	JE1806D28SAL_R2.fastq.gz	JE1806D28SAL_R2.fastq.gz	ERR4368618	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/008/ERR4368618/ERR4368618_2.fastq.gz	Plasmodium chabaudi chabaudi AS	28	day	EFO	UO_0000033	saline
Sample 4 (repeat 1)	ERS4847481	SAMEA7086892	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	intermittent artesunate treatment	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 4 (repeat 1)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 4 (repeat 1)	sequencing assay	ERX4312824	JE1804D28ART_R1.fastq.gz	JE1804D28ART_R1.fastq.gz	ERR4368619	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/009/ERR4368619/ERR4368619_1.fastq.gz	Plasmodium chabaudi chabaudi AS	28	day	EFO	UO_0000033	intermittent artesunate treatment
Sample 4 (repeat 1)	ERS4847481	SAMEA7086892	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	intermittent artesunate treatment	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 4 (repeat 1)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 4 (repeat 1)	sequencing assay	ERX4312824	JE1804D28ART_R2.fastq.gz	JE1804D28ART_R2.fastq.gz	ERR4368619	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/009/ERR4368619/ERR4368619_2.fastq.gz	Plasmodium chabaudi chabaudi AS	28	day	EFO	UO_0000033	intermittent artesunate treatment
Sample 4 (repeat 2)	ERS4847482	SAMEA7086893	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	intermittent artesunate treatment	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 4 (repeat 2)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 4 (repeat 2)	sequencing assay	ERX4312825	JE1806D28ART_R1.fastq.gz	JE1806D28ART_R1.fastq.gz	ERR4368620	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/000/ERR4368620/ERR4368620_1.fastq.gz	Plasmodium chabaudi chabaudi AS	28	day	EFO	UO_0000033	intermittent artesunate treatment
Sample 4 (repeat 2)	ERS4847482	SAMEA7086893	Mus musculus	C57BL/6J	adult	female	spleen	CD4+ T cell	intermittent artesunate treatment	cell	P-MTAB-99435	Megan Soon and Dr. Jessica Engel	P-MTAB-99436	Megan Soon and Dr. Jessica Engel	P-MTAB-99437	Dr. Jessica Engel	Sample 4 (repeat 2)	PAIRED	other	GENOMIC	ATAC-seq	535	73	P-MTAB-99438	QIMR Berghofer Medical Research Institute	Sample 4 (repeat 2)	sequencing assay	ERX4312825	JE1806D28ART_R2.fastq.gz	JE1806D28ART_R2.fastq.gz	ERR4368620	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR436/000/ERR4368620/ERR4368620_2.fastq.gz	Plasmodium chabaudi chabaudi AS	28	day	EFO	UO_0000033	intermittent artesunate treatment