Source Name Comment[ENA_SAMPLE] Comment[BioSD_SAMPLE] Characteristics[organism] Characteristics[cell line] Characteristics[genotype] Characteristics[stimulus] Material Type Protocol REF Protocol REF Protocol REF Protocol REF Performer Extract Name Material Type Comment[LIBRARY_LAYOUT] Comment[LIBRARY_SELECTION] Comment[LIBRARY_SOURCE] Comment[LIBRARY_STRAND] Comment[LIBRARY_STRATEGY] Comment[NOMINAL_LENGTH] Comment[NOMINAL_SDEV] Comment[ORIENTATION] Protocol REF Performer Assay Name Technology Type Comment[ENA_EXPERIMENT] Scan Name Comment[SUBMITTED_FILE_NAME] Comment[ENA_RUN] Comment[FASTQ_URI] Comment[SPOT_LENGTH] Comment[READ_INDEX_1_BASE_COORD] Factor Value[stimulus] Factor Value[immunoprecipitate] Factor Value[protocol] DRIP_mOHT ERS2059584 SAMEA104441642 Homo sapiens U2OS AsiSI-ER expression none cell P-MTAB-70390 P-MTAB-70391 P-MTAB-70387 P-MTAB-70388 EMBL Genomics core facilities (Heidelberg, Germany) DRIP_mOHT DNA SINGLE other GENOMIC not applicable OTHER P-MTAB-70389 EMBL Genomics core facilities (Heidelberg, Germany) DRIP_mOHT sequencing assay ERX2277510 HYG77BGX2_DRIP2_C1_DIVA_17s002460-1-1_Clouaire_lane117s002460_sequence.txt.gz HYG77BGX2_DRIP2_C1_DIVA_17s002460-1-1_Clouaire_lane117s002460_sequence.txt.gz ERR2224138 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/008/ERR2224138/ERR2224138.fastq.gz none anti-S9.6 DRIP-seq DRIP_pOHT ERS2059585 SAMEA104441643 Homo sapiens U2OS AsiSI-ER expression double strand breaks cell P-MTAB-70390 P-MTAB-70391 P-MTAB-70387 P-MTAB-70388 EMBL Genomics core facilities (Heidelberg, Germany) DRIP_pOHT DNA SINGLE other GENOMIC not applicable OTHER P-MTAB-70389 EMBL Genomics core facilities (Heidelberg, Germany) DRIP_pOHT sequencing assay ERX2277511 HYG77BGX2_DRIP2_C1_OHT_17s002461-1-1_Clouaire_lane117s002461_sequence.txt.gz HYG77BGX2_DRIP2_C1_OHT_17s002461-1-1_Clouaire_lane117s002461_sequence.txt.gz ERR2224139 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/009/ERR2224139/ERR2224139.fastq.gz double strand breaks anti-S9.6 DRIP-seq RNA-SEQ_C ERS2059586 SAMEA104441644 Homo sapiens U2OS AsiSI-ER expression none cell P-MTAB-70390 P-MTAB-70391 P-MTAB-70387 P-MTAB-70388 EMBL Genomics core facilities (Heidelberg, Germany) RNA-SEQ_C RNA PAIRED Inverse rRNA TRANSCRIPTOMIC first strand RNA-Seq 75 0 5'-3'-3'-5' P-MTAB-70389 EMBL Genomics core facilities (Heidelberg, Germany) RNA-SEQ_C sequencing assay ERX2277512 HYL5LBGX2_RNA_C1_1_17s002464-1-1_Clouaire_lane117s002464_1_sequence.txt.gz HYL5LBGX2_RNA_C1_1_17s002464-1-1_Clouaire_lane117s002464_1_sequence.txt.gz ERR2224144 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/004/ERR2224144/ERR2224144_1.fastq.gz 160 81 none none RNA-seq RNA-SEQ_C ERS2059586 SAMEA104441644 Homo sapiens U2OS AsiSI-ER expression none cell P-MTAB-70390 P-MTAB-70391 P-MTAB-70387 P-MTAB-70388 EMBL Genomics core facilities (Heidelberg, Germany) RNA-SEQ_C RNA PAIRED Inverse rRNA TRANSCRIPTOMIC first strand RNA-Seq 75 0 5'-3'-3'-5' P-MTAB-70389 EMBL Genomics core facilities (Heidelberg, Germany) RNA-SEQ_C sequencing assay ERX2277512 HYL5LBGX2_RNA_C1_1_17s002464-1-1_Clouaire_lane117s002464_2_sequence.txt.gz HYL5LBGX2_RNA_C1_1_17s002464-1-1_Clouaire_lane117s002464_2_sequence.txt.gz ERR2224144 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/004/ERR2224144/ERR2224144_2.fastq.gz 160 81 none none RNA-seq RNAPOL_Ser2 ERS2059587 SAMEA104441645 Homo sapiens U2OS AsiSI-ER expression none cell P-MTAB-70390 P-MTAB-70391 P-MTAB-70387 P-MTAB-70388 EMBL Genomics core facilities (Heidelberg, Germany) RNAPOL_Ser2 DNA SINGLE ChIP GENOMIC not applicable ChIP-Seq P-MTAB-70389 EMBL Genomics core facilities (Heidelberg, Germany) RNAPOL_Ser2 sequencing assay ERX2277513 H3LNWBGX3_Ser2P_Pol2_DIVA_17s001630-1-1_Clouaire_lane117s001630_sequence.txt.gz H3LNWBGX3_Ser2P_Pol2_DIVA_17s001630-1-1_Clouaire_lane117s001630_sequence.txt.gz ERR2224140 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/000/ERR2224140/ERR2224140.fastq.gz none anti-RNA polymerase II CTD repeat YSPTSPS (phospho S2) ChIP-seq RNAPOL_Total ERS2059588 SAMEA104441646 Homo sapiens U2OS AsiSI-ER expression none cell P-MTAB-70390 P-MTAB-70391 P-MTAB-70387 P-MTAB-70388 EMBL Genomics core facilities (Heidelberg, Germany) RNAPOL_Total DNA SINGLE ChIP GENOMIC not applicable ChIP-Seq P-MTAB-70389 EMBL Genomics core facilities (Heidelberg, Germany) RNAPOL_Total sequencing assay ERX2277514 H3LNWBGX3_Tot_Pol2_DIVA_17s001632-1-1_Clouaire_lane117s001632_sequence.txt.gz H3LNWBGX3_Tot_Pol2_DIVA_17s001632-1-1_Clouaire_lane117s001632_sequence.txt.gz ERR2224141 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/001/ERR2224141/ERR2224141.fastq.gz none input DNA ChIP-seq SETX_mOHT ERS2059589 SAMEA104441647 Homo sapiens U2OS AsiSI-ER expression none cell P-MTAB-70390 P-MTAB-70391 P-MTAB-70387 P-MTAB-70388 EMBL Genomics core facilities (Heidelberg, Germany) SETX_mOHT DNA SINGLE ChIP GENOMIC not applicable ChIP-Seq P-MTAB-70389 EMBL Genomics core facilities (Heidelberg, Germany) SETX_mOHT sequencing assay ERX2277515 HVW7VBGXX_SETX_DIVA_16s000424-1-1_Clouaire_lane116s000424_sequence.txt.gz HVW7VBGXX_SETX_DIVA_16s000424-1-1_Clouaire_lane116s000424_sequence.txt.gz ERR2224142 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/002/ERR2224142/ERR2224142.fastq.gz none anti-Senataxin ChIP-seq SETX_pOHT ERS2059590 SAMEA104441648 Homo sapiens U2OS AsiSI-ER expression double strand breaks cell P-MTAB-70390 P-MTAB-70391 P-MTAB-70387 P-MTAB-70388 EMBL Genomics core facilities (Heidelberg, Germany) SETX_pOHT DNA SINGLE ChIP GENOMIC not applicable ChIP-Seq P-MTAB-70389 EMBL Genomics core facilities (Heidelberg, Germany) SETX_pOHT sequencing assay ERX2277516 HVW7VBGXX_SETX_OHT_DIVA_16s000425-1-1_Clouaire_lane116s000425_sequence.txt.gz HVW7VBGXX_SETX_OHT_DIVA_16s000425-1-1_Clouaire_lane116s000425_sequence.txt.gz ERR2224143 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR222/003/ERR2224143/ERR2224143.fastq.gz double strand breaks anti-Senataxin ChIP-seq