Source Name Characteristics[organism] Characteristics[simulated organism] Characteristics[simulation condition] Provider Material Type Protocol REF Performer Protocol REF Performer Extract Name Comment[LIBRARY_LAYOUT] Comment[LIBRARY_SELECTION] Comment[LIBRARY_SOURCE] Comment[LIBRARY_STRAND] Comment[LIBRARY_STRATEGY] Comment[NOMINAL_LENGTH] Comment[NOMINAL_SDEV] Protocol REF Performer Assay Name Technology Type Array Data File Comment [ArrayExpress FTP file] Comment[MD5] Protocol REF Derived Array Data File Comment [Derived ArrayExpress FTP file] Factor Value[simulated organism] Factor Value[simulation condition] Sample 1 synthetic construct Drosophila melanogaster splicing status A RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 1 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 1 sequencing assay Dm_sample_1_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.1.zip c62c9b23888b7c92f3334a5ac6965883 P-MTAB-45783 Dm_sample1.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample1.bam Drosophila melanogaster splicing status A Sample 1 synthetic construct Drosophila melanogaster splicing status A RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 1 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 1 sequencing assay Dm_sample_1_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.2.zip 1a5df43e4f39d319078260707542f3f4 P-MTAB-45783 Dm_sample1.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample1.bam Drosophila melanogaster splicing status A Sample 2 synthetic construct Drosophila melanogaster splicing status A RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 2 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 2 sequencing assay Dm_sample_2_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.3.zip 2d0902f55bc4c68dd36303377893308c P-MTAB-45783 Dm_sample2.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample2.bam Drosophila melanogaster splicing status A Sample 2 synthetic construct Drosophila melanogaster splicing status A RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 2 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 2 sequencing assay Dm_sample_2_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.4.zip bdd8038647ded1431fae10fd1cd42afa P-MTAB-45783 Dm_sample2.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample2.bam Drosophila melanogaster splicing status A Sample 3 synthetic construct Drosophila melanogaster splicing status A RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 3 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 3 sequencing assay Dm_sample_3_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.5.zip a93601cd89da63042c1befb18f5f10cb P-MTAB-45783 Dm_sample3.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample3.bam Drosophila melanogaster splicing status A Sample 3 synthetic construct Drosophila melanogaster splicing status A RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 3 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 3 sequencing assay Dm_sample_3_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.6.zip c1e464c3a1bb6f7a6be14b17e47a6773 P-MTAB-45783 Dm_sample3.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample3.bam Drosophila melanogaster splicing status A Sample 4 synthetic construct Drosophila melanogaster splicing status B RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 4 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 4 sequencing assay Dm_sample_4_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.7.zip 77ede0bc6fd89d6e16c34b452f9e5340 P-MTAB-45783 Dm_sample4.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample4.bam Drosophila melanogaster splicing status B Sample 4 synthetic construct Drosophila melanogaster splicing status B RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 4 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 4 sequencing assay Dm_sample_4_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.8.zip 4faf82f233f47686c5334f532776afd0 P-MTAB-45783 Dm_sample4.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample4.bam Drosophila melanogaster splicing status B Sample 5 synthetic construct Drosophila melanogaster splicing status B RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 5 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 5 sequencing assay Dm_sample_5_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.9.zip 56030bd124291eb70215edb9246040d4 P-MTAB-45783 Dm_sample5.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample5.bam Drosophila melanogaster splicing status B Sample 5 synthetic construct Drosophila melanogaster splicing status B RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 5 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 5 sequencing assay Dm_sample_5_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.10.zip 8c208bb87f0b3239d11e3048d7e0bd9f P-MTAB-45783 Dm_sample5.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample5.bam Drosophila melanogaster splicing status B Sample 6 synthetic construct Drosophila melanogaster splicing status B RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 6 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 6 sequencing assay Dm_sample_6_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.11.zip 4ac9e28d97a201fb80dee49012869472 P-MTAB-45783 Dm_sample6.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample6.bam Drosophila melanogaster splicing status B Sample 6 synthetic construct Drosophila melanogaster splicing status B RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 6 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 6 sequencing assay Dm_sample_6_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.12.zip 685c276e55efe00a849a4b7d0fcb1d9c P-MTAB-45783 Dm_sample6.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Dm_sample6.bam Drosophila melanogaster splicing status B Sample 7 synthetic construct Homo sapiens splicing status I RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 7 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 7 sequencing assay Hs_sample_1_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.13.zip fb0460a257309dbf1b57380ebd8890d6 P-MTAB-45783 Hs_sample1.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample1.bam Homo sapiens splicing status I Sample 7 synthetic construct Homo sapiens splicing status I RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 7 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 7 sequencing assay Hs_sample_1_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.14.zip a233163e67b4a9e860b3a234b04f3e10 P-MTAB-45783 Hs_sample1.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample1.bam Homo sapiens splicing status I Sample 8 synthetic construct Homo sapiens splicing status I RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 8 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 8 sequencing assay Hs_sample_2_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.15.zip 3e3189d7fcdceab15fdb4a90538a680d P-MTAB-45783 Hs_sample2.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample2.bam Homo sapiens splicing status I Sample 8 synthetic construct Homo sapiens splicing status I RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 8 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 8 sequencing assay Hs_sample_2_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.16.zip a985de50e4c430c0d9157e5e0a13375c P-MTAB-45783 Hs_sample2.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample2.bam Homo sapiens splicing status I Sample 9 synthetic construct Homo sapiens splicing status I RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 9 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 9 sequencing assay Hs_sample_3_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.17.zip 88ebc7a67f2cf71114a1e94d4e040d1f P-MTAB-45783 Hs_sample3.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample3.bam Homo sapiens splicing status I Sample 9 synthetic construct Homo sapiens splicing status I RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 9 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 9 sequencing assay Hs_sample_3_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.18.zip 1f7c0c91d17b6c2ebda60c5c3d6fcdeb P-MTAB-45783 Hs_sample3.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample3.bam Homo sapiens splicing status I Sample 10 synthetic construct Homo sapiens splicing status II RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 10 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 10 sequencing assay Hs_sample_4_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.19.zip 0e959a10c5a931710016fbba69344029 P-MTAB-45783 Hs_sample4.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample4.bam Homo sapiens splicing status II Sample 10 synthetic construct Homo sapiens splicing status II RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 10 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 10 sequencing assay Hs_sample_4_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.20.zip 538bc793756d7b3d15256118a93ffb30 P-MTAB-45783 Hs_sample4.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample4.bam Homo sapiens splicing status II Sample 11 synthetic construct Homo sapiens splicing status II RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 11 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 11 sequencing assay Hs_sample_5_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.21.zip 44321c703bb8658144ff80acb2877f51 P-MTAB-45783 Hs_sample5.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample5.bam Homo sapiens splicing status II Sample 11 synthetic construct Homo sapiens splicing status II RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 11 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 11 sequencing assay Hs_sample_5_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.22.zip b01cc07cf17af40068eba2db71f3a607 P-MTAB-45783 Hs_sample5.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample5.bam Homo sapiens splicing status II Sample 12 synthetic construct Homo sapiens splicing status II RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 12 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 12 sequencing assay Hs_sample_6_1.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.23.zip 6afb2ec31a3d70f2637ebe90f09b6689 P-MTAB-45783 Hs_sample6.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample6.bam Homo sapiens splicing status II Sample 12 synthetic construct Homo sapiens splicing status II RSEM RNA P-MTAB-45780 Charlotte Soneson P-MTAB-45781 Charlotte Soneson Sample 12 PAIRED other TRANSCRIPTOMIC not applicable RNA-Seq 250 10 P-MTAB-45782 Charlotte Soneson Sample 12 sequencing assay Hs_sample_6_2.fq.gz ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.raw.24.zip 274b7f6082920a882603962d6e13a607 P-MTAB-45783 Hs_sample6.bam ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3766/E-MTAB-3766.Hs_sample6.bam Homo sapiens splicing status II