Source Name Comment[ENA_SAMPLE] Characteristics[organism] Characteristics[strain] Characteristics[developmental stage] Characteristics[organism part] Characteristics[cell type] Characteristics[division pattern] Characteristics[single cell well quality] Characteristics[batch] Material Type Protocol REF Protocol REF Protocol REF Extract Name Material Type Comment[LIBRARY_LAYOUT] Comment[LIBRARY_SELECTION] Comment[LIBRARY_SOURCE] Comment[LIBRARY_STRAND] Comment[LIBRARY_STRATEGY] Comment[NOMINAL_LENGTH] Comment[NOMINAL_SDEV] Comment[single cell isolation] Comment[library construction] Comment[end bias] Comment[input molecule] Comment[primer] Comment[spike in] Comment[spike in dilution] Comment[spike sequence file] Comment[spike concentration file] Protocol REF Performer Assay Name Technology Type Comment[ENA_EXPERIMENT] Scan Name Comment[SUBMITTED_FILE_NAME] Comment[ENA_RUN] Comment[FASTQ_URI] Comment[SPOT_LENGTH] Comment[READ_INDEX_1_BASE_COORD] Derived Array Data File Comment [Derived ArrayExpress FTP file] Factor Value[developmental stage] Factor Value[division pattern] Factor Value[single cell identifier] 2cell_1_A ERS1043823 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample1_ sequencing assay ERX1301184 Goolam_et_al_2015_Batch1_Sample1_1.fq.gz Goolam_et_al_2015_Batch1_Sample1_1.fq.gz ERR1229132 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229132/ERR1229132_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_1_A 2cell_1_A ERS1043823 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample1_ sequencing assay ERX1301184 Goolam_et_al_2015_Batch1_Sample1_2.fq.gz Goolam_et_al_2015_Batch1_Sample1_2.fq.gz ERR1229132 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229132/ERR1229132_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_1_A 2cell_1_B ERS1043824 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample13_ sequencing assay ERX1301185 Goolam_et_al_2015_Batch1_Sample13_1.fq.gz Goolam_et_al_2015_Batch1_Sample13_1.fq.gz ERR1229133 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229133/ERR1229133_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_1_B 2cell_1_B ERS1043824 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample13_ sequencing assay ERX1301185 Goolam_et_al_2015_Batch1_Sample13_2.fq.gz Goolam_et_al_2015_Batch1_Sample13_2.fq.gz ERR1229133 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229133/ERR1229133_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_1_B 2cell_2_A ERS1043825 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_2_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample25_ sequencing assay ERX1301186 Goolam_et_al_2015_Batch1_Sample25_1.fq.gz Goolam_et_al_2015_Batch1_Sample25_1.fq.gz ERR1229134 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229134/ERR1229134_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_2_A 2cell_2_A ERS1043825 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_2_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample25_ sequencing assay ERX1301186 Goolam_et_al_2015_Batch1_Sample25_2.fq.gz Goolam_et_al_2015_Batch1_Sample25_2.fq.gz ERR1229134 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229134/ERR1229134_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_2_A 2cell_2_B ERS1043826 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_2_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample37_ sequencing assay ERX1301187 Goolam_et_al_2015_Batch1_Sample37_1.fq.gz Goolam_et_al_2015_Batch1_Sample37_1.fq.gz ERR1229135 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229135/ERR1229135_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_2_B 2cell_2_B ERS1043826 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_2_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample37_ sequencing assay ERX1301187 Goolam_et_al_2015_Batch1_Sample37_2.fq.gz Goolam_et_al_2015_Batch1_Sample37_2.fq.gz ERR1229135 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229135/ERR1229135_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_2_B 2cell_3_A ERS1043827 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_3_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample49_ sequencing assay ERX1301188 Goolam_et_al_2015_Batch1_Sample49_1.fq.gz Goolam_et_al_2015_Batch1_Sample49_1.fq.gz ERR1229136 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229136/ERR1229136_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_3_A 2cell_3_A ERS1043827 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_3_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample49_ sequencing assay ERX1301188 Goolam_et_al_2015_Batch1_Sample49_2.fq.gz Goolam_et_al_2015_Batch1_Sample49_2.fq.gz ERR1229136 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229136/ERR1229136_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_3_A 2cell_3_B ERS1043828 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_3_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample61_ sequencing assay ERX1301189 Goolam_et_al_2015_Batch1_Sample61_1.fq.gz Goolam_et_al_2015_Batch1_Sample61_1.fq.gz ERR1229137 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229137/ERR1229137_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_3_B 2cell_3_B ERS1043828 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 2cell_3_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample61_ sequencing assay ERX1301189 Goolam_et_al_2015_Batch1_Sample61_2.fq.gz Goolam_et_al_2015_Batch1_Sample61_2.fq.gz ERR1229137 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229137/ERR1229137_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_3_B 2cell_4_A ERS1046970 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_4_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample50_ sequencing assay ERX1303377 Goolam_et_al_2015_Batch3_Sample50_1.fq.gz Goolam_et_al_2015_Batch3_Sample50_1.fq.gz ERR1231438 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/008/ERR1231438/ERR1231438_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_4_A 2cell_4_A ERS1046970 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_4_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample50_ sequencing assay ERX1303377 Goolam_et_al_2015_Batch3_Sample50_2.fq.gz Goolam_et_al_2015_Batch3_Sample50_2.fq.gz ERR1231438 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/008/ERR1231438/ERR1231438_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_4_A 2cell_4_B ERS1046971 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_4_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample62_ sequencing assay ERX1303378 Goolam_et_al_2015_Batch3_Sample62_1.fq.gz Goolam_et_al_2015_Batch3_Sample62_1.fq.gz ERR1231439 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/009/ERR1231439/ERR1231439_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_4_B 2cell_4_B ERS1046971 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_4_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample62_ sequencing assay ERX1303378 Goolam_et_al_2015_Batch3_Sample62_2.fq.gz Goolam_et_al_2015_Batch3_Sample62_2.fq.gz ERR1231439 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/009/ERR1231439/ERR1231439_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_4_B 2cell_5_A ERS1046972 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_5_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample74_ sequencing assay ERX1303379 Goolam_et_al_2015_Batch3_Sample74_1.fq.gz Goolam_et_al_2015_Batch3_Sample74_1.fq.gz ERR1231440 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/000/ERR1231440/ERR1231440_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_5_A 2cell_5_A ERS1046972 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_5_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample74_ sequencing assay ERX1303379 Goolam_et_al_2015_Batch3_Sample74_2.fq.gz Goolam_et_al_2015_Batch3_Sample74_2.fq.gz ERR1231440 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/000/ERR1231440/ERR1231440_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_5_A 2cell_5_B ERS1046973 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_5_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample86_ sequencing assay ERX1303380 Goolam_et_al_2015_Batch3_Sample86_1.fq.gz Goolam_et_al_2015_Batch3_Sample86_1.fq.gz ERR1231441 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/001/ERR1231441/ERR1231441_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_5_B 2cell_5_B ERS1046973 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_5_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample86_ sequencing assay ERX1303380 Goolam_et_al_2015_Batch3_Sample86_2.fq.gz Goolam_et_al_2015_Batch3_Sample86_2.fq.gz ERR1231441 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/001/ERR1231441/ERR1231441_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_5_B 2cell_6_A ERS1046974 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_6_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample3_ sequencing assay ERX1303381 Goolam_et_al_2015_Batch3_Sample3_1.fq.gz Goolam_et_al_2015_Batch3_Sample3_1.fq.gz ERR1231442 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/002/ERR1231442/ERR1231442_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_6_A 2cell_6_A ERS1046974 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_6_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample3_ sequencing assay ERX1303381 Goolam_et_al_2015_Batch3_Sample3_2.fq.gz Goolam_et_al_2015_Batch3_Sample3_2.fq.gz ERR1231442 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/002/ERR1231442/ERR1231442_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_6_A 2cell_6_B ERS1046975 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_6_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample15_ sequencing assay ERX1303382 Goolam_et_al_2015_Batch3_Sample15_1.fq.gz Goolam_et_al_2015_Batch3_Sample15_1.fq.gz ERR1231443 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/003/ERR1231443/ERR1231443_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_6_B 2cell_6_B ERS1046975 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_6_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample15_ sequencing assay ERX1303382 Goolam_et_al_2015_Batch3_Sample15_2.fq.gz Goolam_et_al_2015_Batch3_Sample15_2.fq.gz ERR1231443 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/003/ERR1231443/ERR1231443_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_6_B 2cell_7_A ERS1046976 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_7_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample27_ sequencing assay ERX1303383 Goolam_et_al_2015_Batch3_Sample27_1.fq.gz Goolam_et_al_2015_Batch3_Sample27_1.fq.gz ERR1231444 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/004/ERR1231444/ERR1231444_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_7_A 2cell_7_A ERS1046976 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_7_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample27_ sequencing assay ERX1303383 Goolam_et_al_2015_Batch3_Sample27_2.fq.gz Goolam_et_al_2015_Batch3_Sample27_2.fq.gz ERR1231444 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/004/ERR1231444/ERR1231444_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_7_A 2cell_7_B ERS1046977 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_7_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample39_ sequencing assay ERX1303384 Goolam_et_al_2015_Batch3_Sample39_1.fq.gz Goolam_et_al_2015_Batch3_Sample39_1.fq.gz ERR1231445 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/005/ERR1231445/ERR1231445_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_7_B 2cell_7_B ERS1046977 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_7_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample39_ sequencing assay ERX1303384 Goolam_et_al_2015_Batch3_Sample39_2.fq.gz Goolam_et_al_2015_Batch3_Sample39_2.fq.gz ERR1231445 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/005/ERR1231445/ERR1231445_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_7_B 2cell_8_A ERS1046978 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_8_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample51_ sequencing assay ERX1303385 Goolam_et_al_2015_Batch3_Sample51_1.fq.gz Goolam_et_al_2015_Batch3_Sample51_1.fq.gz ERR1231446 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/006/ERR1231446/ERR1231446_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_8_A 2cell_8_A ERS1046978 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_8_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample51_ sequencing assay ERX1303385 Goolam_et_al_2015_Batch3_Sample51_2.fq.gz Goolam_et_al_2015_Batch3_Sample51_2.fq.gz ERR1231446 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/006/ERR1231446/ERR1231446_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_8_A 2cell_8_B ERS1046979 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_8_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample63_ sequencing assay ERX1303386 Goolam_et_al_2015_Batch3_Sample63_1.fq.gz Goolam_et_al_2015_Batch3_Sample63_1.fq.gz ERR1231447 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/007/ERR1231447/ERR1231447_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_8_B 2cell_8_B ERS1046979 Mus musculus C57BL/6 x CBA cleavage 2-cell embryo blastoderm cell not applicable OK 3 cell P-MTAB-43329 P-MTAB-43332 2cell_8_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch3_Sample63_ sequencing assay ERX1303386 Goolam_et_al_2015_Batch3_Sample63_2.fq.gz Goolam_et_al_2015_Batch3_Sample63_2.fq.gz ERR1231447 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/007/ERR1231447/ERR1231447_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 2-cell not applicable 2cell_8_B EE_4cell_1_A ERS1043851 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EE_4cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample30_ sequencing assay ERX1301212 Goolam_et_al_2015_Batch1_Sample30_1.fq.gz Goolam_et_al_2015_Batch1_Sample30_1.fq.gz ERR1229160 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229160/ERR1229160_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - equatorial EE_4cell_1_A EE_4cell_1_A ERS1043851 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EE_4cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample30_ sequencing assay ERX1301212 Goolam_et_al_2015_Batch1_Sample30_2.fq.gz Goolam_et_al_2015_Batch1_Sample30_2.fq.gz ERR1229160 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229160/ERR1229160_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - equatorial EE_4cell_1_A EE_4cell_1_B ERS1043852 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EE_4cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample42_ sequencing assay ERX1301213 Goolam_et_al_2015_Batch1_Sample42_1.fq.gz Goolam_et_al_2015_Batch1_Sample42_1.fq.gz ERR1229161 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229161/ERR1229161_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - equatorial EE_4cell_1_B EE_4cell_1_B ERS1043852 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EE_4cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample42_ sequencing assay ERX1301213 Goolam_et_al_2015_Batch1_Sample42_2.fq.gz Goolam_et_al_2015_Batch1_Sample42_2.fq.gz ERR1229161 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229161/ERR1229161_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - equatorial EE_4cell_1_B EE_4cell_1_C ERS1043853 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EE_4cell_1_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample54_ sequencing assay ERX1301214 Goolam_et_al_2015_Batch1_Sample54_1.fq.gz Goolam_et_al_2015_Batch1_Sample54_1.fq.gz ERR1229162 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229162/ERR1229162_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - equatorial EE_4cell_1_C EE_4cell_1_C ERS1043853 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EE_4cell_1_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample54_ sequencing assay ERX1301214 Goolam_et_al_2015_Batch1_Sample54_2.fq.gz Goolam_et_al_2015_Batch1_Sample54_2.fq.gz ERR1229162 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229162/ERR1229162_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - equatorial EE_4cell_1_C EE_4cell_1_D ERS1043854 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EE_4cell_1_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample66_ sequencing assay ERX1301215 Goolam_et_al_2015_Batch1_Sample66_1.fq.gz Goolam_et_al_2015_Batch1_Sample66_1.fq.gz ERR1229163 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229163/ERR1229163_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - equatorial EE_4cell_1_D EE_4cell_1_D ERS1043854 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EE_4cell_1_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample66_ sequencing assay ERX1301215 Goolam_et_al_2015_Batch1_Sample66_2.fq.gz Goolam_et_al_2015_Batch1_Sample66_2.fq.gz ERR1229163 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229163/ERR1229163_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - equatorial EE_4cell_1_D EM_4cell_1_A ERS1043855 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample27_ sequencing assay ERX1301216 Goolam_et_al_2015_Batch1_Sample27_1.fq.gz Goolam_et_al_2015_Batch1_Sample27_1.fq.gz ERR1229164 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229164/ERR1229164_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_1_A EM_4cell_1_A ERS1043855 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample27_ sequencing assay ERX1301216 Goolam_et_al_2015_Batch1_Sample27_2.fq.gz Goolam_et_al_2015_Batch1_Sample27_2.fq.gz ERR1229164 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229164/ERR1229164_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_1_A EM_4cell_1_B ERS1043856 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample39_ sequencing assay ERX1301217 Goolam_et_al_2015_Batch1_Sample39_1.fq.gz Goolam_et_al_2015_Batch1_Sample39_1.fq.gz ERR1229165 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229165/ERR1229165_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_1_B EM_4cell_1_B ERS1043856 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample39_ sequencing assay ERX1301217 Goolam_et_al_2015_Batch1_Sample39_2.fq.gz Goolam_et_al_2015_Batch1_Sample39_2.fq.gz ERR1229165 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229165/ERR1229165_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_1_B EM_4cell_1_C ERS1043857 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_1_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample51_ sequencing assay ERX1301218 Goolam_et_al_2015_Batch1_Sample51_1.fq.gz Goolam_et_al_2015_Batch1_Sample51_1.fq.gz ERR1229166 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229166/ERR1229166_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_1_C EM_4cell_1_C ERS1043857 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_1_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample51_ sequencing assay ERX1301218 Goolam_et_al_2015_Batch1_Sample51_2.fq.gz Goolam_et_al_2015_Batch1_Sample51_2.fq.gz ERR1229166 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229166/ERR1229166_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_1_C EM_4cell_1_D ERS1043858 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_1_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample63_ sequencing assay ERX1301219 Goolam_et_al_2015_Batch1_Sample63_1.fq.gz Goolam_et_al_2015_Batch1_Sample63_1.fq.gz ERR1229167 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229167/ERR1229167_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_1_D EM_4cell_1_D ERS1043858 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_1_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample63_ sequencing assay ERX1301219 Goolam_et_al_2015_Batch1_Sample63_2.fq.gz Goolam_et_al_2015_Batch1_Sample63_2.fq.gz ERR1229167 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229167/ERR1229167_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_1_D EM_4cell_2_A ERS1043859 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_2_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample75_ sequencing assay ERX1301220 Goolam_et_al_2015_Batch1_Sample75_1.fq.gz Goolam_et_al_2015_Batch1_Sample75_1.fq.gz ERR1229168 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229168/ERR1229168_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_2_A EM_4cell_2_A ERS1043859 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_2_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample75_ sequencing assay ERX1301220 Goolam_et_al_2015_Batch1_Sample75_2.fq.gz Goolam_et_al_2015_Batch1_Sample75_2.fq.gz ERR1229168 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229168/ERR1229168_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_2_A EM_4cell_2_B ERS1043860 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_2_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample87_ sequencing assay ERX1301221 Goolam_et_al_2015_Batch1_Sample87_1.fq.gz Goolam_et_al_2015_Batch1_Sample87_1.fq.gz ERR1229169 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229169/ERR1229169_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_2_B EM_4cell_2_B ERS1043860 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_2_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample87_ sequencing assay ERX1301221 Goolam_et_al_2015_Batch1_Sample87_2.fq.gz Goolam_et_al_2015_Batch1_Sample87_2.fq.gz ERR1229169 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229169/ERR1229169_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_2_B EM_4cell_2_C ERS1043861 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_2_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample4_ sequencing assay ERX1301222 Goolam_et_al_2015_Batch1_Sample4_1.fq.gz Goolam_et_al_2015_Batch1_Sample4_1.fq.gz ERR1229170 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229170/ERR1229170_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_2_C EM_4cell_2_C ERS1043861 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_2_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample4_ sequencing assay ERX1301222 Goolam_et_al_2015_Batch1_Sample4_2.fq.gz Goolam_et_al_2015_Batch1_Sample4_2.fq.gz ERR1229170 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229170/ERR1229170_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_2_C EM_4cell_2_D ERS1043862 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_2_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample16_ sequencing assay ERX1301223 Goolam_et_al_2015_Batch1_Sample16_1.fq.gz Goolam_et_al_2015_Batch1_Sample16_1.fq.gz ERR1229171 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229171/ERR1229171_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_2_D EM_4cell_2_D ERS1043862 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_2_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample16_ sequencing assay ERX1301223 Goolam_et_al_2015_Batch1_Sample16_2.fq.gz Goolam_et_al_2015_Batch1_Sample16_2.fq.gz ERR1229171 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229171/ERR1229171_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_2_D EM_4cell_3_A ERS1043863 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_3_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample28_ sequencing assay ERX1301224 Goolam_et_al_2015_Batch1_Sample28_1.fq.gz Goolam_et_al_2015_Batch1_Sample28_1.fq.gz ERR1229172 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229172/ERR1229172_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_3_A EM_4cell_3_A ERS1043863 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_3_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample28_ sequencing assay ERX1301224 Goolam_et_al_2015_Batch1_Sample28_2.fq.gz Goolam_et_al_2015_Batch1_Sample28_2.fq.gz ERR1229172 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229172/ERR1229172_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_3_A EM_4cell_3_B ERS1043864 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_3_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample40_ sequencing assay ERX1301225 Goolam_et_al_2015_Batch1_Sample40_1.fq.gz Goolam_et_al_2015_Batch1_Sample40_1.fq.gz ERR1229173 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229173/ERR1229173_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_3_B EM_4cell_3_B ERS1043864 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_3_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample40_ sequencing assay ERX1301225 Goolam_et_al_2015_Batch1_Sample40_2.fq.gz Goolam_et_al_2015_Batch1_Sample40_2.fq.gz ERR1229173 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229173/ERR1229173_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_3_B EM_4cell_3_C ERS1043865 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_3_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample52_ sequencing assay ERX1301226 Goolam_et_al_2015_Batch1_Sample52_1.fq.gz Goolam_et_al_2015_Batch1_Sample52_1.fq.gz ERR1229174 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229174/ERR1229174_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_3_C EM_4cell_3_C ERS1043865 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_3_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample52_ sequencing assay ERX1301226 Goolam_et_al_2015_Batch1_Sample52_2.fq.gz Goolam_et_al_2015_Batch1_Sample52_2.fq.gz ERR1229174 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229174/ERR1229174_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_3_C EM_4cell_3_D ERS1043866 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_3_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample64_ sequencing assay ERX1301227 Goolam_et_al_2015_Batch1_Sample64_1.fq.gz Goolam_et_al_2015_Batch1_Sample64_1.fq.gz ERR1229175 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229175/ERR1229175_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_3_D EM_4cell_3_D ERS1043866 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_3_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample64_ sequencing assay ERX1301227 Goolam_et_al_2015_Batch1_Sample64_2.fq.gz Goolam_et_al_2015_Batch1_Sample64_2.fq.gz ERR1229175 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229175/ERR1229175_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_3_D ME_4cell_1_A ERS1043867 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample73_ sequencing assay ERX1301228 Goolam_et_al_2015_Batch1_Sample73_1.fq.gz Goolam_et_al_2015_Batch1_Sample73_1.fq.gz ERR1229176 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229176/ERR1229176_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_1_A ME_4cell_1_A ERS1043867 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample73_ sequencing assay ERX1301228 Goolam_et_al_2015_Batch1_Sample73_2.fq.gz Goolam_et_al_2015_Batch1_Sample73_2.fq.gz ERR1229176 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229176/ERR1229176_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_1_A ME_4cell_1_B ERS1043868 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample85_ sequencing assay ERX1301229 Goolam_et_al_2015_Batch1_Sample85_1.fq.gz Goolam_et_al_2015_Batch1_Sample85_1.fq.gz ERR1229177 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229177/ERR1229177_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_1_B ME_4cell_1_B ERS1043868 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample85_ sequencing assay ERX1301229 Goolam_et_al_2015_Batch1_Sample85_2.fq.gz Goolam_et_al_2015_Batch1_Sample85_2.fq.gz ERR1229177 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229177/ERR1229177_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_1_B ME_4cell_1_C ERS1043869 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_1_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample2_ sequencing assay ERX1301230 Goolam_et_al_2015_Batch1_Sample2_1.fq.gz Goolam_et_al_2015_Batch1_Sample2_1.fq.gz ERR1229178 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229178/ERR1229178_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_1_C ME_4cell_1_C ERS1043869 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_1_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample2_ sequencing assay ERX1301230 Goolam_et_al_2015_Batch1_Sample2_2.fq.gz Goolam_et_al_2015_Batch1_Sample2_2.fq.gz ERR1229178 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229178/ERR1229178_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_1_C ME_4cell_1_D ERS1043870 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_1_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample14_ sequencing assay ERX1301231 Goolam_et_al_2015_Batch1_Sample14_1.fq.gz Goolam_et_al_2015_Batch1_Sample14_1.fq.gz ERR1229179 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229179/ERR1229179_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_1_D ME_4cell_1_D ERS1043870 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_1_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample14_ sequencing assay ERX1301231 Goolam_et_al_2015_Batch1_Sample14_2.fq.gz Goolam_et_al_2015_Batch1_Sample14_2.fq.gz ERR1229179 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229179/ERR1229179_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_1_D ME_4cell_2_A ERS1043871 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_2_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample26_ sequencing assay ERX1301232 Goolam_et_al_2015_Batch1_Sample26_1.fq.gz Goolam_et_al_2015_Batch1_Sample26_1.fq.gz ERR1229180 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229180/ERR1229180_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_2_A ME_4cell_2_A ERS1043871 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_2_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample26_ sequencing assay ERX1301232 Goolam_et_al_2015_Batch1_Sample26_2.fq.gz Goolam_et_al_2015_Batch1_Sample26_2.fq.gz ERR1229180 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229180/ERR1229180_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_2_A ME_4cell_2_B ERS1043872 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_2_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample38_ sequencing assay ERX1301233 Goolam_et_al_2015_Batch1_Sample38_1.fq.gz Goolam_et_al_2015_Batch1_Sample38_1.fq.gz ERR1229181 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229181/ERR1229181_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_2_B ME_4cell_2_B ERS1043872 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_2_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample38_ sequencing assay ERX1301233 Goolam_et_al_2015_Batch1_Sample38_2.fq.gz Goolam_et_al_2015_Batch1_Sample38_2.fq.gz ERR1229181 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229181/ERR1229181_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_2_B ME_4cell_2_C ERS1043873 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_2_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample50_ sequencing assay ERX1301234 Goolam_et_al_2015_Batch1_Sample50_1.fq.gz Goolam_et_al_2015_Batch1_Sample50_1.fq.gz ERR1229182 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229182/ERR1229182_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_2_C ME_4cell_2_C ERS1043873 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_2_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample50_ sequencing assay ERX1301234 Goolam_et_al_2015_Batch1_Sample50_2.fq.gz Goolam_et_al_2015_Batch1_Sample50_2.fq.gz ERR1229182 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229182/ERR1229182_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_2_C ME_4cell_2_D ERS1043874 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_2_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample62_ sequencing assay ERX1301235 Goolam_et_al_2015_Batch1_Sample62_1.fq.gz Goolam_et_al_2015_Batch1_Sample62_1.fq.gz ERR1229183 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229183/ERR1229183_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_2_D ME_4cell_2_D ERS1043874 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_2_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample62_ sequencing assay ERX1301235 Goolam_et_al_2015_Batch1_Sample62_2.fq.gz Goolam_et_al_2015_Batch1_Sample62_2.fq.gz ERR1229183 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229183/ERR1229183_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_2_D ME_4cell_3_A ERS1043875 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_3_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample74_ sequencing assay ERX1301236 Goolam_et_al_2015_Batch1_Sample74_1.fq.gz Goolam_et_al_2015_Batch1_Sample74_1.fq.gz ERR1229184 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229184/ERR1229184_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_3_A ME_4cell_3_A ERS1043875 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_3_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample74_ sequencing assay ERX1301236 Goolam_et_al_2015_Batch1_Sample74_2.fq.gz Goolam_et_al_2015_Batch1_Sample74_2.fq.gz ERR1229184 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229184/ERR1229184_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_3_A ME_4cell_3_B ERS1043876 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_3_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample86_ sequencing assay ERX1301237 Goolam_et_al_2015_Batch1_Sample86_1.fq.gz Goolam_et_al_2015_Batch1_Sample86_1.fq.gz ERR1229185 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229185/ERR1229185_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_3_B ME_4cell_3_B ERS1043876 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_3_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample86_ sequencing assay ERX1301237 Goolam_et_al_2015_Batch1_Sample86_2.fq.gz Goolam_et_al_2015_Batch1_Sample86_2.fq.gz ERR1229185 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229185/ERR1229185_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_3_B ME_4cell_3_C ERS1043877 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_3_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample3_ sequencing assay ERX1301238 Goolam_et_al_2015_Batch1_Sample3_1.fq.gz Goolam_et_al_2015_Batch1_Sample3_1.fq.gz ERR1229186 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229186/ERR1229186_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_3_C ME_4cell_3_C ERS1043877 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_3_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample3_ sequencing assay ERX1301238 Goolam_et_al_2015_Batch1_Sample3_2.fq.gz Goolam_et_al_2015_Batch1_Sample3_2.fq.gz ERR1229186 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229186/ERR1229186_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_3_C ME_4cell_3_D ERS1043878 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_3_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample15_ sequencing assay ERX1301239 Goolam_et_al_2015_Batch1_Sample15_1.fq.gz Goolam_et_al_2015_Batch1_Sample15_1.fq.gz ERR1229187 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229187/ERR1229187_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_3_D ME_4cell_3_D ERS1043878 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_3_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample15_ sequencing assay ERX1301239 Goolam_et_al_2015_Batch1_Sample15_2.fq.gz Goolam_et_al_2015_Batch1_Sample15_2.fq.gz ERR1229187 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229187/ERR1229187_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_3_D MM_4cell_1_A ERS1043879 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample76_ sequencing assay ERX1301240 Goolam_et_al_2015_Batch1_Sample76_1.fq.gz Goolam_et_al_2015_Batch1_Sample76_1.fq.gz ERR1229188 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229188/ERR1229188_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_1_A MM_4cell_1_A ERS1043879 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample76_ sequencing assay ERX1301240 Goolam_et_al_2015_Batch1_Sample76_2.fq.gz Goolam_et_al_2015_Batch1_Sample76_2.fq.gz ERR1229188 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229188/ERR1229188_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_1_A MM_4cell_1_B ERS1043880 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample88_ sequencing assay ERX1301241 Goolam_et_al_2015_Batch1_Sample88_1.fq.gz Goolam_et_al_2015_Batch1_Sample88_1.fq.gz ERR1229189 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229189/ERR1229189_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_1_B MM_4cell_1_B ERS1043880 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample88_ sequencing assay ERX1301241 Goolam_et_al_2015_Batch1_Sample88_2.fq.gz Goolam_et_al_2015_Batch1_Sample88_2.fq.gz ERR1229189 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229189/ERR1229189_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_1_B MM_4cell_1_C ERS1043881 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_1_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample5_ sequencing assay ERX1301242 Goolam_et_al_2015_Batch1_Sample5_1.fq.gz Goolam_et_al_2015_Batch1_Sample5_1.fq.gz ERR1229190 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229190/ERR1229190_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_1_C MM_4cell_1_C ERS1043881 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_1_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample5_ sequencing assay ERX1301242 Goolam_et_al_2015_Batch1_Sample5_2.fq.gz Goolam_et_al_2015_Batch1_Sample5_2.fq.gz ERR1229190 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229190/ERR1229190_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_1_C MM_4cell_1_D ERS1043882 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_1_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample17_ sequencing assay ERX1301243 Goolam_et_al_2015_Batch1_Sample17_1.fq.gz Goolam_et_al_2015_Batch1_Sample17_1.fq.gz ERR1229191 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229191/ERR1229191_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_1_D MM_4cell_1_D ERS1043882 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_1_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample17_ sequencing assay ERX1301243 Goolam_et_al_2015_Batch1_Sample17_2.fq.gz Goolam_et_al_2015_Batch1_Sample17_2.fq.gz ERR1229191 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229191/ERR1229191_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_1_D MM_4cell_2_A ERS1043883 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_2_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample29_ sequencing assay ERX1301244 Goolam_et_al_2015_Batch1_Sample29_1.fq.gz Goolam_et_al_2015_Batch1_Sample29_1.fq.gz ERR1229192 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229192/ERR1229192_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_2_A MM_4cell_2_A ERS1043883 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_2_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample29_ sequencing assay ERX1301244 Goolam_et_al_2015_Batch1_Sample29_2.fq.gz Goolam_et_al_2015_Batch1_Sample29_2.fq.gz ERR1229192 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229192/ERR1229192_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_2_A MM_4cell_2_B ERS1043884 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_2_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample41_ sequencing assay ERX1301245 Goolam_et_al_2015_Batch1_Sample41_1.fq.gz Goolam_et_al_2015_Batch1_Sample41_1.fq.gz ERR1229193 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229193/ERR1229193_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_2_B MM_4cell_2_B ERS1043884 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_2_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample41_ sequencing assay ERX1301245 Goolam_et_al_2015_Batch1_Sample41_2.fq.gz Goolam_et_al_2015_Batch1_Sample41_2.fq.gz ERR1229193 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229193/ERR1229193_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_2_B MM_4cell_2_C ERS1043885 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_2_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample53_ sequencing assay ERX1301246 Goolam_et_al_2015_Batch1_Sample53_1.fq.gz Goolam_et_al_2015_Batch1_Sample53_1.fq.gz ERR1229194 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229194/ERR1229194_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_2_C MM_4cell_2_C ERS1043885 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_2_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample53_ sequencing assay ERX1301246 Goolam_et_al_2015_Batch1_Sample53_2.fq.gz Goolam_et_al_2015_Batch1_Sample53_2.fq.gz ERR1229194 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229194/ERR1229194_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_2_C MM_4cell_2_D ERS1043886 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_2_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample65_ sequencing assay ERX1301247 Goolam_et_al_2015_Batch1_Sample65_1.fq.gz Goolam_et_al_2015_Batch1_Sample65_1.fq.gz ERR1229195 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229195/ERR1229195_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_2_D MM_4cell_2_D ERS1043886 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_2_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample65_ sequencing assay ERX1301247 Goolam_et_al_2015_Batch1_Sample65_2.fq.gz Goolam_et_al_2015_Batch1_Sample65_2.fq.gz ERR1229195 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229195/ERR1229195_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_2_D MM_4cell_3_A ERS1043887 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_3_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample77_ sequencing assay ERX1301248 Goolam_et_al_2015_Batch1_Sample77_1.fq.gz Goolam_et_al_2015_Batch1_Sample77_1.fq.gz ERR1229196 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229196/ERR1229196_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_3_A MM_4cell_3_A ERS1043887 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_3_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample77_ sequencing assay ERX1301248 Goolam_et_al_2015_Batch1_Sample77_2.fq.gz Goolam_et_al_2015_Batch1_Sample77_2.fq.gz ERR1229196 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229196/ERR1229196_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_3_A MM_4cell_3_B ERS1043888 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_3_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample89_ sequencing assay ERX1301249 Goolam_et_al_2015_Batch1_Sample89_1.fq.gz Goolam_et_al_2015_Batch1_Sample89_1.fq.gz ERR1229197 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229197/ERR1229197_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_3_B MM_4cell_3_B ERS1043888 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_3_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample89_ sequencing assay ERX1301249 Goolam_et_al_2015_Batch1_Sample89_2.fq.gz Goolam_et_al_2015_Batch1_Sample89_2.fq.gz ERR1229197 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229197/ERR1229197_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_3_B MM_4cell_3_C ERS1043889 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_3_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample6_ sequencing assay ERX1301250 Goolam_et_al_2015_Batch1_Sample6_1.fq.gz Goolam_et_al_2015_Batch1_Sample6_1.fq.gz ERR1229198 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229198/ERR1229198_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_3_C MM_4cell_3_C ERS1043889 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_3_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample6_ sequencing assay ERX1301250 Goolam_et_al_2015_Batch1_Sample6_2.fq.gz Goolam_et_al_2015_Batch1_Sample6_2.fq.gz ERR1229198 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229198/ERR1229198_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_3_C MM_4cell_3_D ERS1043890 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_3_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample18_ sequencing assay ERX1301251 Goolam_et_al_2015_Batch1_Sample18_1.fq.gz Goolam_et_al_2015_Batch1_Sample18_1.fq.gz ERR1229199 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229199/ERR1229199_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_3_D MM_4cell_3_D ERS1043890 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - meridional OK 1 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 MM_4cell_3_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample18_ sequencing assay ERX1301251 Goolam_et_al_2015_Batch1_Sample18_2.fq.gz Goolam_et_al_2015_Batch1_Sample18_2.fq.gz ERR1229199 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229199/ERR1229199_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - meridional MM_4cell_3_D ME_4cell_4_A ERS1046980 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_4_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample49_ sequencing assay ERX1303387 Goolam_et_al_2015_Batch4_Sample49_1.fq.gz Goolam_et_al_2015_Batch4_Sample49_1.fq.gz ERR1231448 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/008/ERR1231448/ERR1231448_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_4_A ME_4cell_4_A ERS1046980 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_4_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample49_ sequencing assay ERX1303387 Goolam_et_al_2015_Batch4_Sample49_2.fq.gz Goolam_et_al_2015_Batch4_Sample49_2.fq.gz ERR1231448 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/008/ERR1231448/ERR1231448_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_4_A ME_4cell_4_B ERS1046981 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_4_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample50_ sequencing assay ERX1303388 Goolam_et_al_2015_Batch4_Sample50_1.fq.gz Goolam_et_al_2015_Batch4_Sample50_1.fq.gz ERR1231449 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/009/ERR1231449/ERR1231449_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_4_B ME_4cell_4_B ERS1046981 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_4_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample50_ sequencing assay ERX1303388 Goolam_et_al_2015_Batch4_Sample50_2.fq.gz Goolam_et_al_2015_Batch4_Sample50_2.fq.gz ERR1231449 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/009/ERR1231449/ERR1231449_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_4_B ME_4cell_4_C ERS1046982 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_4_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample51_ sequencing assay ERX1303389 Goolam_et_al_2015_Batch4_Sample51_1.fq.gz Goolam_et_al_2015_Batch4_Sample51_1.fq.gz ERR1231450 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/000/ERR1231450/ERR1231450_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_4_C ME_4cell_4_C ERS1046982 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_4_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample51_ sequencing assay ERX1303389 Goolam_et_al_2015_Batch4_Sample51_2.fq.gz Goolam_et_al_2015_Batch4_Sample51_2.fq.gz ERR1231450 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/000/ERR1231450/ERR1231450_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_4_C ME_4cell_4_D ERS1046983 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_4_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample52_ sequencing assay ERX1303390 Goolam_et_al_2015_Batch4_Sample52_1.fq.gz Goolam_et_al_2015_Batch4_Sample52_1.fq.gz ERR1231451 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/001/ERR1231451/ERR1231451_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_4_D ME_4cell_4_D ERS1046983 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_4_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample52_ sequencing assay ERX1303390 Goolam_et_al_2015_Batch4_Sample52_2.fq.gz Goolam_et_al_2015_Batch4_Sample52_2.fq.gz ERR1231451 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/001/ERR1231451/ERR1231451_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_4_D ME_4cell_5_A ERS1046984 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_5_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample53_ sequencing assay ERX1303391 Goolam_et_al_2015_Batch4_Sample53_1.fq.gz Goolam_et_al_2015_Batch4_Sample53_1.fq.gz ERR1231452 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/002/ERR1231452/ERR1231452_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_5_A ME_4cell_5_A ERS1046984 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_5_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample53_ sequencing assay ERX1303391 Goolam_et_al_2015_Batch4_Sample53_2.fq.gz Goolam_et_al_2015_Batch4_Sample53_2.fq.gz ERR1231452 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/002/ERR1231452/ERR1231452_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_5_A ME_4cell_5_B ERS1046985 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_5_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample54_ sequencing assay ERX1303392 Goolam_et_al_2015_Batch4_Sample54_1.fq.gz Goolam_et_al_2015_Batch4_Sample54_1.fq.gz ERR1231453 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/003/ERR1231453/ERR1231453_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_5_B ME_4cell_5_B ERS1046985 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_5_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample54_ sequencing assay ERX1303392 Goolam_et_al_2015_Batch4_Sample54_2.fq.gz Goolam_et_al_2015_Batch4_Sample54_2.fq.gz ERR1231453 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/003/ERR1231453/ERR1231453_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_5_B ME_4cell_5_C ERS1046986 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_5_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample55_ sequencing assay ERX1303393 Goolam_et_al_2015_Batch4_Sample55_1.fq.gz Goolam_et_al_2015_Batch4_Sample55_1.fq.gz ERR1231454 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/004/ERR1231454/ERR1231454_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_5_C ME_4cell_5_C ERS1046986 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_5_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample55_ sequencing assay ERX1303393 Goolam_et_al_2015_Batch4_Sample55_2.fq.gz Goolam_et_al_2015_Batch4_Sample55_2.fq.gz ERR1231454 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/004/ERR1231454/ERR1231454_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_5_C ME_4cell_5_D ERS1046987 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_5_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample56_ sequencing assay ERX1303394 Goolam_et_al_2015_Batch4_Sample56_1.fq.gz Goolam_et_al_2015_Batch4_Sample56_1.fq.gz ERR1231455 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/005/ERR1231455/ERR1231455_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_5_D ME_4cell_5_D ERS1046987 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_5_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample56_ sequencing assay ERX1303394 Goolam_et_al_2015_Batch4_Sample56_2.fq.gz Goolam_et_al_2015_Batch4_Sample56_2.fq.gz ERR1231455 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/005/ERR1231455/ERR1231455_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_5_D EM_4cell_4_A ERS1046988 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_4_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample57_ sequencing assay ERX1303395 Goolam_et_al_2015_Batch4_Sample57_1.fq.gz Goolam_et_al_2015_Batch4_Sample57_1.fq.gz ERR1231456 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/006/ERR1231456/ERR1231456_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_4_A EM_4cell_4_A ERS1046988 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_4_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample57_ sequencing assay ERX1303395 Goolam_et_al_2015_Batch4_Sample57_2.fq.gz Goolam_et_al_2015_Batch4_Sample57_2.fq.gz ERR1231456 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/006/ERR1231456/ERR1231456_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_4_A EM_4cell_4_B ERS1046989 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_4_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample58_ sequencing assay ERX1303396 Goolam_et_al_2015_Batch4_Sample58_1.fq.gz Goolam_et_al_2015_Batch4_Sample58_1.fq.gz ERR1231457 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/007/ERR1231457/ERR1231457_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_4_B EM_4cell_4_B ERS1046989 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_4_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample58_ sequencing assay ERX1303396 Goolam_et_al_2015_Batch4_Sample58_2.fq.gz Goolam_et_al_2015_Batch4_Sample58_2.fq.gz ERR1231457 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/007/ERR1231457/ERR1231457_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_4_B EM_4cell_4_C ERS1046990 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_4_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample59_ sequencing assay ERX1303397 Goolam_et_al_2015_Batch4_Sample59_1.fq.gz Goolam_et_al_2015_Batch4_Sample59_1.fq.gz ERR1231458 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/008/ERR1231458/ERR1231458_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_4_C EM_4cell_4_C ERS1046990 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_4_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample59_ sequencing assay ERX1303397 Goolam_et_al_2015_Batch4_Sample59_2.fq.gz Goolam_et_al_2015_Batch4_Sample59_2.fq.gz ERR1231458 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/008/ERR1231458/ERR1231458_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_4_C EM_4cell_4_D ERS1046991 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_4_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample60_ sequencing assay ERX1303398 Goolam_et_al_2015_Batch4_Sample60_1.fq.gz Goolam_et_al_2015_Batch4_Sample60_1.fq.gz ERR1231459 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/009/ERR1231459/ERR1231459_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_4_D EM_4cell_4_D ERS1046991 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_4_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample60_ sequencing assay ERX1303398 Goolam_et_al_2015_Batch4_Sample60_2.fq.gz Goolam_et_al_2015_Batch4_Sample60_2.fq.gz ERR1231459 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/009/ERR1231459/ERR1231459_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_4_D EM_4cell_5_A ERS1046992 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_5_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample61_ sequencing assay ERX1303399 Goolam_et_al_2015_Batch4_Sample61_1.fq.gz Goolam_et_al_2015_Batch4_Sample61_1.fq.gz ERR1231460 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/000/ERR1231460/ERR1231460_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_5_A EM_4cell_5_A ERS1046992 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_5_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample61_ sequencing assay ERX1303399 Goolam_et_al_2015_Batch4_Sample61_2.fq.gz Goolam_et_al_2015_Batch4_Sample61_2.fq.gz ERR1231460 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/000/ERR1231460/ERR1231460_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_5_A EM_4cell_5_B ERS1046993 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_5_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample62_ sequencing assay ERX1303400 Goolam_et_al_2015_Batch4_Sample62_1.fq.gz Goolam_et_al_2015_Batch4_Sample62_1.fq.gz ERR1231461 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/001/ERR1231461/ERR1231461_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_5_B EM_4cell_5_B ERS1046993 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_5_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample62_ sequencing assay ERX1303400 Goolam_et_al_2015_Batch4_Sample62_2.fq.gz Goolam_et_al_2015_Batch4_Sample62_2.fq.gz ERR1231461 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/001/ERR1231461/ERR1231461_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_5_B EM_4cell_5_C ERS1046994 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_5_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample63_ sequencing assay ERX1303401 Goolam_et_al_2015_Batch4_Sample63_1.fq.gz Goolam_et_al_2015_Batch4_Sample63_1.fq.gz ERR1231462 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/002/ERR1231462/ERR1231462_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_5_C EM_4cell_5_C ERS1046994 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_5_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample63_ sequencing assay ERX1303401 Goolam_et_al_2015_Batch4_Sample63_2.fq.gz Goolam_et_al_2015_Batch4_Sample63_2.fq.gz ERR1231462 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/002/ERR1231462/ERR1231462_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_5_C EM_4cell_5_D ERS1046995 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_5_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample64_ sequencing assay ERX1303402 Goolam_et_al_2015_Batch4_Sample64_1.fq.gz Goolam_et_al_2015_Batch4_Sample64_1.fq.gz ERR1231463 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/003/ERR1231463/ERR1231463_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_5_D EM_4cell_5_D ERS1046995 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_5_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample64_ sequencing assay ERX1303402 Goolam_et_al_2015_Batch4_Sample64_2.fq.gz Goolam_et_al_2015_Batch4_Sample64_2.fq.gz ERR1231463 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/003/ERR1231463/ERR1231463_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_5_D EM_4cell_6_A ERS1046996 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_6_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample65_ sequencing assay ERX1303403 Goolam_et_al_2015_Batch4_Sample65_1.fq.gz Goolam_et_al_2015_Batch4_Sample65_1.fq.gz ERR1231464 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/004/ERR1231464/ERR1231464_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_6_A EM_4cell_6_A ERS1046996 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_6_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample65_ sequencing assay ERX1303403 Goolam_et_al_2015_Batch4_Sample65_2.fq.gz Goolam_et_al_2015_Batch4_Sample65_2.fq.gz ERR1231464 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/004/ERR1231464/ERR1231464_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_6_A EM_4cell_6_B ERS1046997 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_6_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample66_ sequencing assay ERX1303404 Goolam_et_al_2015_Batch4_Sample66_1.fq.gz Goolam_et_al_2015_Batch4_Sample66_1.fq.gz ERR1231465 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/005/ERR1231465/ERR1231465_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_6_B EM_4cell_6_B ERS1046997 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_6_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample66_ sequencing assay ERX1303404 Goolam_et_al_2015_Batch4_Sample66_2.fq.gz Goolam_et_al_2015_Batch4_Sample66_2.fq.gz ERR1231465 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/005/ERR1231465/ERR1231465_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_6_B EM_4cell_6_C ERS1046998 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_6_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample67_ sequencing assay ERX1303405 Goolam_et_al_2015_Batch4_Sample67_1.fq.gz Goolam_et_al_2015_Batch4_Sample67_1.fq.gz ERR1231466 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/006/ERR1231466/ERR1231466_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_6_C EM_4cell_6_C ERS1046998 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_6_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample67_ sequencing assay ERX1303405 Goolam_et_al_2015_Batch4_Sample67_2.fq.gz Goolam_et_al_2015_Batch4_Sample67_2.fq.gz ERR1231466 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/006/ERR1231466/ERR1231466_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_6_C EM_4cell_6_D ERS1046999 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_6_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample68_ sequencing assay ERX1303406 Goolam_et_al_2015_Batch4_Sample68_1.fq.gz Goolam_et_al_2015_Batch4_Sample68_1.fq.gz ERR1231467 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/007/ERR1231467/ERR1231467_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_6_D EM_4cell_6_D ERS1046999 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell equatorial - meridional OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 EM_4cell_6_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample68_ sequencing assay ERX1303406 Goolam_et_al_2015_Batch4_Sample68_2.fq.gz Goolam_et_al_2015_Batch4_Sample68_2.fq.gz ERR1231467 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/007/ERR1231467/ERR1231467_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell equatorial - meridional EM_4cell_6_D ME_4cell_6_A ERS1047000 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_6_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample69_ sequencing assay ERX1303407 Goolam_et_al_2015_Batch4_Sample69_1.fq.gz Goolam_et_al_2015_Batch4_Sample69_1.fq.gz ERR1231468 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/008/ERR1231468/ERR1231468_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_6_A ME_4cell_6_A ERS1047000 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_6_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample69_ sequencing assay ERX1303407 Goolam_et_al_2015_Batch4_Sample69_2.fq.gz Goolam_et_al_2015_Batch4_Sample69_2.fq.gz ERR1231468 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/008/ERR1231468/ERR1231468_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_6_A ME_4cell_6_B ERS1047001 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_6_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample70_ sequencing assay ERX1303408 Goolam_et_al_2015_Batch4_Sample70_1.fq.gz Goolam_et_al_2015_Batch4_Sample70_1.fq.gz ERR1231469 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/009/ERR1231469/ERR1231469_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_6_B ME_4cell_6_B ERS1047001 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_6_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample70_ sequencing assay ERX1303408 Goolam_et_al_2015_Batch4_Sample70_2.fq.gz Goolam_et_al_2015_Batch4_Sample70_2.fq.gz ERR1231469 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/009/ERR1231469/ERR1231469_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_6_B ME_4cell_6_C ERS1047002 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_6_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample71_ sequencing assay ERX1303409 Goolam_et_al_2015_Batch4_Sample71_1.fq.gz Goolam_et_al_2015_Batch4_Sample71_1.fq.gz ERR1231470 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/000/ERR1231470/ERR1231470_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_6_C ME_4cell_6_C ERS1047002 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_6_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample71_ sequencing assay ERX1303409 Goolam_et_al_2015_Batch4_Sample71_2.fq.gz Goolam_et_al_2015_Batch4_Sample71_2.fq.gz ERR1231470 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/000/ERR1231470/ERR1231470_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_6_C ME_4cell_6_D ERS1047003 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_6_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample72_ sequencing assay ERX1303410 Goolam_et_al_2015_Batch4_Sample72_1.fq.gz Goolam_et_al_2015_Batch4_Sample72_1.fq.gz ERR1231471 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/001/ERR1231471/ERR1231471_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_6_D ME_4cell_6_D ERS1047003 Mus musculus C57BL/6 x CBA cleavage 4-cell embryo blastoderm cell meridional - equatorial OK 4 cell P-MTAB-43329 P-MTAB-43330 P-MTAB-43332 ME_4cell_6_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:1000000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch4_Sample72_ sequencing assay ERX1303410 Goolam_et_al_2015_Batch4_Sample72_2.fq.gz Goolam_et_al_2015_Batch4_Sample72_2.fq.gz ERR1231471 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/001/ERR1231471/ERR1231471_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 4-cell meridional - equatorial ME_4cell_6_D 8cell_1_A ERS1043835 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample78_ sequencing assay ERX1301196 Goolam_et_al_2015_Batch1_Sample78_1.fq.gz Goolam_et_al_2015_Batch1_Sample78_1.fq.gz ERR1229144 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229144/ERR1229144_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_A 8cell_1_A ERS1043835 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample78_ sequencing assay ERX1301196 Goolam_et_al_2015_Batch1_Sample78_2.fq.gz Goolam_et_al_2015_Batch1_Sample78_2.fq.gz ERR1229144 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229144/ERR1229144_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_A 8cell_1_B ERS1043836 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample90_ sequencing assay ERX1301197 Goolam_et_al_2015_Batch1_Sample90_1.fq.gz Goolam_et_al_2015_Batch1_Sample90_1.fq.gz ERR1229145 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229145/ERR1229145_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_B 8cell_1_B ERS1043836 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample90_ sequencing assay ERX1301197 Goolam_et_al_2015_Batch1_Sample90_2.fq.gz Goolam_et_al_2015_Batch1_Sample90_2.fq.gz ERR1229145 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229145/ERR1229145_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_B 8cell_1_C ERS1043837 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample7_ sequencing assay ERX1301198 Goolam_et_al_2015_Batch1_Sample7_1.fq.gz Goolam_et_al_2015_Batch1_Sample7_1.fq.gz ERR1229146 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229146/ERR1229146_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_C 8cell_1_C ERS1043837 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample7_ sequencing assay ERX1301198 Goolam_et_al_2015_Batch1_Sample7_2.fq.gz Goolam_et_al_2015_Batch1_Sample7_2.fq.gz ERR1229146 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229146/ERR1229146_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_C 8cell_1_D ERS1043838 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample19_ sequencing assay ERX1301199 Goolam_et_al_2015_Batch1_Sample19_1.fq.gz Goolam_et_al_2015_Batch1_Sample19_1.fq.gz ERR1229147 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229147/ERR1229147_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_D 8cell_1_D ERS1043838 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample19_ sequencing assay ERX1301199 Goolam_et_al_2015_Batch1_Sample19_2.fq.gz Goolam_et_al_2015_Batch1_Sample19_2.fq.gz ERR1229147 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229147/ERR1229147_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_D 8cell_1_E ERS1043839 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample31_ sequencing assay ERX1301200 Goolam_et_al_2015_Batch1_Sample31_1.fq.gz Goolam_et_al_2015_Batch1_Sample31_1.fq.gz ERR1229148 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229148/ERR1229148_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_E 8cell_1_E ERS1043839 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample31_ sequencing assay ERX1301200 Goolam_et_al_2015_Batch1_Sample31_2.fq.gz Goolam_et_al_2015_Batch1_Sample31_2.fq.gz ERR1229148 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229148/ERR1229148_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_E 8cell_1_F ERS1043840 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample43_ sequencing assay ERX1301201 Goolam_et_al_2015_Batch1_Sample43_1.fq.gz Goolam_et_al_2015_Batch1_Sample43_1.fq.gz ERR1229149 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229149/ERR1229149_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_F 8cell_1_F ERS1043840 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample43_ sequencing assay ERX1301201 Goolam_et_al_2015_Batch1_Sample43_2.fq.gz Goolam_et_al_2015_Batch1_Sample43_2.fq.gz ERR1229149 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229149/ERR1229149_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_F 8cell_1_G ERS1043841 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_G RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample55_ sequencing assay ERX1301202 Goolam_et_al_2015_Batch1_Sample55_1.fq.gz Goolam_et_al_2015_Batch1_Sample55_1.fq.gz ERR1229150 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229150/ERR1229150_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_G 8cell_1_G ERS1043841 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_G RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample55_ sequencing assay ERX1301202 Goolam_et_al_2015_Batch1_Sample55_2.fq.gz Goolam_et_al_2015_Batch1_Sample55_2.fq.gz ERR1229150 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229150/ERR1229150_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_G 8cell_1_H ERS1043842 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_H RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample67_ sequencing assay ERX1301203 Goolam_et_al_2015_Batch1_Sample67_1.fq.gz Goolam_et_al_2015_Batch1_Sample67_1.fq.gz ERR1229151 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229151/ERR1229151_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_H 8cell_1_H ERS1043842 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_1_H RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample67_ sequencing assay ERX1301203 Goolam_et_al_2015_Batch1_Sample67_2.fq.gz Goolam_et_al_2015_Batch1_Sample67_2.fq.gz ERR1229151 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229151/ERR1229151_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_1_H 8cell_2_A ERS1043843 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample79_ sequencing assay ERX1301204 Goolam_et_al_2015_Batch1_Sample79_1.fq.gz Goolam_et_al_2015_Batch1_Sample79_1.fq.gz ERR1229152 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229152/ERR1229152_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_A 8cell_2_A ERS1043843 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample79_ sequencing assay ERX1301204 Goolam_et_al_2015_Batch1_Sample79_2.fq.gz Goolam_et_al_2015_Batch1_Sample79_2.fq.gz ERR1229152 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229152/ERR1229152_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_A 8cell_2_B ERS1043844 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample91_ sequencing assay ERX1301205 Goolam_et_al_2015_Batch1_Sample91_1.fq.gz Goolam_et_al_2015_Batch1_Sample91_1.fq.gz ERR1229153 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229153/ERR1229153_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_B 8cell_2_B ERS1043844 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample91_ sequencing assay ERX1301205 Goolam_et_al_2015_Batch1_Sample91_2.fq.gz Goolam_et_al_2015_Batch1_Sample91_2.fq.gz ERR1229153 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229153/ERR1229153_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_B 8cell_2_C ERS1043845 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample8_ sequencing assay ERX1301206 Goolam_et_al_2015_Batch1_Sample8_1.fq.gz Goolam_et_al_2015_Batch1_Sample8_1.fq.gz ERR1229154 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229154/ERR1229154_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_C 8cell_2_C ERS1043845 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample8_ sequencing assay ERX1301206 Goolam_et_al_2015_Batch1_Sample8_2.fq.gz Goolam_et_al_2015_Batch1_Sample8_2.fq.gz ERR1229154 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/004/ERR1229154/ERR1229154_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_C 8cell_2_D ERS1043846 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample20_ sequencing assay ERX1301207 Goolam_et_al_2015_Batch1_Sample20_1.fq.gz Goolam_et_al_2015_Batch1_Sample20_1.fq.gz ERR1229155 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229155/ERR1229155_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_D 8cell_2_D ERS1043846 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample20_ sequencing assay ERX1301207 Goolam_et_al_2015_Batch1_Sample20_2.fq.gz Goolam_et_al_2015_Batch1_Sample20_2.fq.gz ERR1229155 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/005/ERR1229155/ERR1229155_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_D 8cell_2_E ERS1043847 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample32_ sequencing assay ERX1301208 Goolam_et_al_2015_Batch1_Sample32_1.fq.gz Goolam_et_al_2015_Batch1_Sample32_1.fq.gz ERR1229156 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229156/ERR1229156_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_E 8cell_2_E ERS1043847 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample32_ sequencing assay ERX1301208 Goolam_et_al_2015_Batch1_Sample32_2.fq.gz Goolam_et_al_2015_Batch1_Sample32_2.fq.gz ERR1229156 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229156/ERR1229156_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_E 8cell_2_F ERS1043848 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample44_ sequencing assay ERX1301209 Goolam_et_al_2015_Batch1_Sample44_1.fq.gz Goolam_et_al_2015_Batch1_Sample44_1.fq.gz ERR1229157 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229157/ERR1229157_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_F 8cell_2_F ERS1043848 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample44_ sequencing assay ERX1301209 Goolam_et_al_2015_Batch1_Sample44_2.fq.gz Goolam_et_al_2015_Batch1_Sample44_2.fq.gz ERR1229157 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229157/ERR1229157_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_F 8cell_2_G ERS1043849 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_G RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample56_ sequencing assay ERX1301210 Goolam_et_al_2015_Batch1_Sample56_1.fq.gz Goolam_et_al_2015_Batch1_Sample56_1.fq.gz ERR1229158 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229158/ERR1229158_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_G 8cell_2_G ERS1043849 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_G RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample56_ sequencing assay ERX1301210 Goolam_et_al_2015_Batch1_Sample56_2.fq.gz Goolam_et_al_2015_Batch1_Sample56_2.fq.gz ERR1229158 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229158/ERR1229158_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_G 8cell_2_H ERS1043850 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_H RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample68_ sequencing assay ERX1301211 Goolam_et_al_2015_Batch1_Sample68_1.fq.gz Goolam_et_al_2015_Batch1_Sample68_1.fq.gz ERR1229159 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229159/ERR1229159_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_H 8cell_2_H ERS1043850 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 8cell_2_H RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample68_ sequencing assay ERX1301211 Goolam_et_al_2015_Batch1_Sample68_2.fq.gz Goolam_et_al_2015_Batch1_Sample68_2.fq.gz ERR1229159 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229159/ERR1229159_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_2_H 8cell_3_A ERS1046954 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample11_ sequencing assay ERX1303361 Goolam_et_al_2015_Batch2_Sample11_1.fq.gz Goolam_et_al_2015_Batch2_Sample11_1.fq.gz ERR1231422 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/002/ERR1231422/ERR1231422_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_A 8cell_3_A ERS1046954 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample11_ sequencing assay ERX1303361 Goolam_et_al_2015_Batch2_Sample11_2.fq.gz Goolam_et_al_2015_Batch2_Sample11_2.fq.gz ERR1231422 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/002/ERR1231422/ERR1231422_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_A 8cell_4_A ERS1046955 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample12_ sequencing assay ERX1303362 Goolam_et_al_2015_Batch2_Sample12_1.fq.gz Goolam_et_al_2015_Batch2_Sample12_1.fq.gz ERR1231423 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/003/ERR1231423/ERR1231423_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_A 8cell_4_A ERS1046955 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample12_ sequencing assay ERX1303362 Goolam_et_al_2015_Batch2_Sample12_2.fq.gz Goolam_et_al_2015_Batch2_Sample12_2.fq.gz ERR1231423 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/003/ERR1231423/ERR1231423_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_A 8cell_3_B ERS1046956 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample23_ sequencing assay ERX1303363 Goolam_et_al_2015_Batch2_Sample23_1.fq.gz Goolam_et_al_2015_Batch2_Sample23_1.fq.gz ERR1231424 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/004/ERR1231424/ERR1231424_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_B 8cell_3_B ERS1046956 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample23_ sequencing assay ERX1303363 Goolam_et_al_2015_Batch2_Sample23_2.fq.gz Goolam_et_al_2015_Batch2_Sample23_2.fq.gz ERR1231424 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/004/ERR1231424/ERR1231424_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_B 8cell_4_B ERS1046957 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample24_ sequencing assay ERX1303364 Goolam_et_al_2015_Batch2_Sample24_1.fq.gz Goolam_et_al_2015_Batch2_Sample24_1.fq.gz ERR1231425 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/005/ERR1231425/ERR1231425_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_B 8cell_4_B ERS1046957 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample24_ sequencing assay ERX1303364 Goolam_et_al_2015_Batch2_Sample24_2.fq.gz Goolam_et_al_2015_Batch2_Sample24_2.fq.gz ERR1231425 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/005/ERR1231425/ERR1231425_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_B 8cell_3_C ERS1046958 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample35_ sequencing assay ERX1303365 Goolam_et_al_2015_Batch2_Sample35_1.fq.gz Goolam_et_al_2015_Batch2_Sample35_1.fq.gz ERR1231426 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/006/ERR1231426/ERR1231426_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_C 8cell_3_C ERS1046958 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample35_ sequencing assay ERX1303365 Goolam_et_al_2015_Batch2_Sample35_2.fq.gz Goolam_et_al_2015_Batch2_Sample35_2.fq.gz ERR1231426 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/006/ERR1231426/ERR1231426_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_C 8cell_4_C ERS1046959 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample36_ sequencing assay ERX1303366 Goolam_et_al_2015_Batch2_Sample36_1.fq.gz Goolam_et_al_2015_Batch2_Sample36_1.fq.gz ERR1231427 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/007/ERR1231427/ERR1231427_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_C 8cell_4_C ERS1046959 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample36_ sequencing assay ERX1303366 Goolam_et_al_2015_Batch2_Sample36_2.fq.gz Goolam_et_al_2015_Batch2_Sample36_2.fq.gz ERR1231427 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/007/ERR1231427/ERR1231427_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_C 8cell_3_D ERS1046960 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample47_ sequencing assay ERX1303367 Goolam_et_al_2015_Batch2_Sample47_1.fq.gz Goolam_et_al_2015_Batch2_Sample47_1.fq.gz ERR1231428 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/008/ERR1231428/ERR1231428_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_D 8cell_3_D ERS1046960 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample47_ sequencing assay ERX1303367 Goolam_et_al_2015_Batch2_Sample47_2.fq.gz Goolam_et_al_2015_Batch2_Sample47_2.fq.gz ERR1231428 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/008/ERR1231428/ERR1231428_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_D 8cell_4_D ERS1046961 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample48_ sequencing assay ERX1303368 Goolam_et_al_2015_Batch2_Sample48_1.fq.gz Goolam_et_al_2015_Batch2_Sample48_1.fq.gz ERR1231429 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/009/ERR1231429/ERR1231429_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_D 8cell_4_D ERS1046961 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample48_ sequencing assay ERX1303368 Goolam_et_al_2015_Batch2_Sample48_2.fq.gz Goolam_et_al_2015_Batch2_Sample48_2.fq.gz ERR1231429 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/009/ERR1231429/ERR1231429_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_D 8cell_3_E ERS1046962 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample59_ sequencing assay ERX1303369 Goolam_et_al_2015_Batch2_Sample59_1.fq.gz Goolam_et_al_2015_Batch2_Sample59_1.fq.gz ERR1231430 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/000/ERR1231430/ERR1231430_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_E 8cell_3_E ERS1046962 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample59_ sequencing assay ERX1303369 Goolam_et_al_2015_Batch2_Sample59_2.fq.gz Goolam_et_al_2015_Batch2_Sample59_2.fq.gz ERR1231430 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/000/ERR1231430/ERR1231430_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_E 8cell_4_E ERS1046963 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample60_ sequencing assay ERX1303370 Goolam_et_al_2015_Batch2_Sample60_1.fq.gz Goolam_et_al_2015_Batch2_Sample60_1.fq.gz ERR1231431 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/001/ERR1231431/ERR1231431_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_E 8cell_4_E ERS1046963 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample60_ sequencing assay ERX1303370 Goolam_et_al_2015_Batch2_Sample60_2.fq.gz Goolam_et_al_2015_Batch2_Sample60_2.fq.gz ERR1231431 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/001/ERR1231431/ERR1231431_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_E 8cell_3_F ERS1046964 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample71_ sequencing assay ERX1303371 Goolam_et_al_2015_Batch2_Sample71_1.fq.gz Goolam_et_al_2015_Batch2_Sample71_1.fq.gz ERR1231432 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/002/ERR1231432/ERR1231432_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_F 8cell_3_F ERS1046964 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample71_ sequencing assay ERX1303371 Goolam_et_al_2015_Batch2_Sample71_2.fq.gz Goolam_et_al_2015_Batch2_Sample71_2.fq.gz ERR1231432 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/002/ERR1231432/ERR1231432_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_F 8cell_4_F ERS1046965 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample72_ sequencing assay ERX1303372 Goolam_et_al_2015_Batch2_Sample72_1.fq.gz Goolam_et_al_2015_Batch2_Sample72_1.fq.gz ERR1231433 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/003/ERR1231433/ERR1231433_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_F 8cell_4_F ERS1046965 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample72_ sequencing assay ERX1303372 Goolam_et_al_2015_Batch2_Sample72_2.fq.gz Goolam_et_al_2015_Batch2_Sample72_2.fq.gz ERR1231433 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/003/ERR1231433/ERR1231433_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_F 8cell_3_G ERS1046966 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_G RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample83_ sequencing assay ERX1303373 Goolam_et_al_2015_Batch2_Sample83_1.fq.gz Goolam_et_al_2015_Batch2_Sample83_1.fq.gz ERR1231434 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/004/ERR1231434/ERR1231434_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_G 8cell_3_G ERS1046966 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_G RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample83_ sequencing assay ERX1303373 Goolam_et_al_2015_Batch2_Sample83_2.fq.gz Goolam_et_al_2015_Batch2_Sample83_2.fq.gz ERR1231434 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/004/ERR1231434/ERR1231434_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_G 8cell_4_G ERS1046967 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_G RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample84_ sequencing assay ERX1303374 Goolam_et_al_2015_Batch2_Sample84_1.fq.gz Goolam_et_al_2015_Batch2_Sample84_1.fq.gz ERR1231435 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/005/ERR1231435/ERR1231435_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_G 8cell_4_G ERS1046967 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_G RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample84_ sequencing assay ERX1303374 Goolam_et_al_2015_Batch2_Sample84_2.fq.gz Goolam_et_al_2015_Batch2_Sample84_2.fq.gz ERR1231435 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/005/ERR1231435/ERR1231435_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_G 8cell_3_H ERS1046968 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_H RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample95_ sequencing assay ERX1303375 Goolam_et_al_2015_Batch2_Sample95_1.fq.gz Goolam_et_al_2015_Batch2_Sample95_1.fq.gz ERR1231436 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/006/ERR1231436/ERR1231436_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_H 8cell_3_H ERS1046968 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_3_H RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample95_ sequencing assay ERX1303375 Goolam_et_al_2015_Batch2_Sample95_2.fq.gz Goolam_et_al_2015_Batch2_Sample95_2.fq.gz ERR1231436 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/006/ERR1231436/ERR1231436_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_3_H 8cell_4_H ERS1046969 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_H RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample96_ sequencing assay ERX1303376 Goolam_et_al_2015_Batch2_Sample96_1.fq.gz Goolam_et_al_2015_Batch2_Sample96_1.fq.gz ERR1231437 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/007/ERR1231437/ERR1231437_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_H 8cell_4_H ERS1046969 Mus musculus C57BL/6 x CBA cleavage 8-cell embryo blastoderm cell not applicable OK 2 cell P-MTAB-43329 P-MTAB-43332 8cell_4_H RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch2_Sample96_ sequencing assay ERX1303376 Goolam_et_al_2015_Batch2_Sample96_2.fq.gz Goolam_et_al_2015_Batch2_Sample96_2.fq.gz ERR1231437 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR123/007/ERR1231437/ERR1231437_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 8-cell not applicable 8cell_4_H 16cell_A ERS1043817 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample9_ sequencing assay ERX1301178 Goolam_et_al_2015_Batch1_Sample9_1.fq.gz Goolam_et_al_2015_Batch1_Sample9_1.fq.gz ERR1229126 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229126/ERR1229126_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_A 16cell_A ERS1043817 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample9_ sequencing assay ERX1301178 Goolam_et_al_2015_Batch1_Sample9_2.fq.gz Goolam_et_al_2015_Batch1_Sample9_2.fq.gz ERR1229126 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/006/ERR1229126/ERR1229126_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_A 16cell_B ERS1043818 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample21_ sequencing assay ERX1301179 Goolam_et_al_2015_Batch1_Sample21_1.fq.gz Goolam_et_al_2015_Batch1_Sample21_1.fq.gz ERR1229127 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229127/ERR1229127_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_B 16cell_B ERS1043818 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample21_ sequencing assay ERX1301179 Goolam_et_al_2015_Batch1_Sample21_2.fq.gz Goolam_et_al_2015_Batch1_Sample21_2.fq.gz ERR1229127 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/007/ERR1229127/ERR1229127_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_B 16cell_C ERS1043819 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample33_ sequencing assay ERX1301180 Goolam_et_al_2015_Batch1_Sample33_1.fq.gz Goolam_et_al_2015_Batch1_Sample33_1.fq.gz ERR1229128 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229128/ERR1229128_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_C 16cell_C ERS1043819 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample33_ sequencing assay ERX1301180 Goolam_et_al_2015_Batch1_Sample33_2.fq.gz Goolam_et_al_2015_Batch1_Sample33_2.fq.gz ERR1229128 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229128/ERR1229128_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_C 16cell_D ERS1043820 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample45_ sequencing assay ERX1301181 Goolam_et_al_2015_Batch1_Sample45_1.fq.gz Goolam_et_al_2015_Batch1_Sample45_1.fq.gz ERR1229129 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229129/ERR1229129_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_D 16cell_D ERS1043820 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample45_ sequencing assay ERX1301181 Goolam_et_al_2015_Batch1_Sample45_2.fq.gz Goolam_et_al_2015_Batch1_Sample45_2.fq.gz ERR1229129 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229129/ERR1229129_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_D 16cell_E ERS1043821 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample57_ sequencing assay ERX1301182 Goolam_et_al_2015_Batch1_Sample57_1.fq.gz Goolam_et_al_2015_Batch1_Sample57_1.fq.gz ERR1229130 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229130/ERR1229130_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_E 16cell_E ERS1043821 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample57_ sequencing assay ERX1301182 Goolam_et_al_2015_Batch1_Sample57_2.fq.gz Goolam_et_al_2015_Batch1_Sample57_2.fq.gz ERR1229130 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229130/ERR1229130_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_E 16cell_F ERS1043822 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample69_ sequencing assay ERX1301183 Goolam_et_al_2015_Batch1_Sample69_1.fq.gz Goolam_et_al_2015_Batch1_Sample69_1.fq.gz ERR1229131 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229131/ERR1229131_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_F 16cell_F ERS1043822 Mus musculus C57BL/6 x CBA cleavage 16-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 16cell_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample69_ sequencing assay ERX1301183 Goolam_et_al_2015_Batch1_Sample69_2.fq.gz Goolam_et_al_2015_Batch1_Sample69_2.fq.gz ERR1229131 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229131/ERR1229131_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 16-cell not applicable 16cell_F 32cell_A ERS1043829 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample10_ sequencing assay ERX1301190 Goolam_et_al_2015_Batch1_Sample10_1.fq.gz Goolam_et_al_2015_Batch1_Sample10_1.fq.gz ERR1229138 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229138/ERR1229138_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_A 32cell_A ERS1043829 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_A RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample10_ sequencing assay ERX1301190 Goolam_et_al_2015_Batch1_Sample10_2.fq.gz Goolam_et_al_2015_Batch1_Sample10_2.fq.gz ERR1229138 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/008/ERR1229138/ERR1229138_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_A 32cell_B ERS1043830 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample22_ sequencing assay ERX1301191 Goolam_et_al_2015_Batch1_Sample22_1.fq.gz Goolam_et_al_2015_Batch1_Sample22_1.fq.gz ERR1229139 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229139/ERR1229139_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_B 32cell_B ERS1043830 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_B RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample22_ sequencing assay ERX1301191 Goolam_et_al_2015_Batch1_Sample22_2.fq.gz Goolam_et_al_2015_Batch1_Sample22_2.fq.gz ERR1229139 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/009/ERR1229139/ERR1229139_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_B 32cell_C ERS1043831 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample34_ sequencing assay ERX1301192 Goolam_et_al_2015_Batch1_Sample34_1.fq.gz Goolam_et_al_2015_Batch1_Sample34_1.fq.gz ERR1229140 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229140/ERR1229140_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_C 32cell_C ERS1043831 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_C RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample34_ sequencing assay ERX1301192 Goolam_et_al_2015_Batch1_Sample34_2.fq.gz Goolam_et_al_2015_Batch1_Sample34_2.fq.gz ERR1229140 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/000/ERR1229140/ERR1229140_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_C 32cell_D ERS1043832 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample46_ sequencing assay ERX1301193 Goolam_et_al_2015_Batch1_Sample46_1.fq.gz Goolam_et_al_2015_Batch1_Sample46_1.fq.gz ERR1229141 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229141/ERR1229141_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_D 32cell_D ERS1043832 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_D RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample46_ sequencing assay ERX1301193 Goolam_et_al_2015_Batch1_Sample46_2.fq.gz Goolam_et_al_2015_Batch1_Sample46_2.fq.gz ERR1229141 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/001/ERR1229141/ERR1229141_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_D 32cell_E ERS1043833 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample58_ sequencing assay ERX1301194 Goolam_et_al_2015_Batch1_Sample58_1.fq.gz Goolam_et_al_2015_Batch1_Sample58_1.fq.gz ERR1229142 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229142/ERR1229142_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_E 32cell_E ERS1043833 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_E RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample58_ sequencing assay ERX1301194 Goolam_et_al_2015_Batch1_Sample58_2.fq.gz Goolam_et_al_2015_Batch1_Sample58_2.fq.gz ERR1229142 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/002/ERR1229142/ERR1229142_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_E 32cell_F ERS1043834 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable not OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample70_ sequencing assay ERX1301195 Goolam_et_al_2015_Batch1_Sample70_1.fq.gz Goolam_et_al_2015_Batch1_Sample70_1.fq.gz ERR1229143 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229143/ERR1229143_1.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_F 32cell_F ERS1043834 Mus musculus C57BL/6 x CBA cleavage 32-cell embryo blastoderm cell not applicable not OK 1 cell P-MTAB-43329 P-MTAB-43332 32cell_F RNA PAIRED cDNA TRANSCRIPTOMIC not applicable RNA-Seq 450 100 other smart-seq2 none polyA RNA oligo-dT ERCC 1:250000 E-MTAB-3321_spike_in_sequences.fa E-MTAB-3321_spike_in_concentration.txt P-MTAB-43331 Iain Macaulay Goolam_et_al_2015_Batch1_Sample70_ sequencing assay ERX1301195 Goolam_et_al_2015_Batch1_Sample70_2.fq.gz Goolam_et_al_2015_Batch1_Sample70_2.fq.gz ERR1229143 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR122/003/ERR1229143/ERR1229143_2.fastq.gz 200 101 Goolam_et_al_2015_count_table.tsv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MTAB/E-MTAB-3321/E-MTAB-3321.processed.1.zip cleavage 32-cell not applicable 32cell_F