Source Name	Material Type	Characteristics[organism]	Provider	Characteristics[sex]	Characteristics[genetic modification]	Characteristics[cell type]	Characteristics[cell line]	Characteristics[genotype]	Characteristics[growth condition]	Protocol REF	Protocol REF	Protocol REF	Extract Name	Material Type	Protocol REF	Labeled Extract Name	Label	Protocol REF	Assay Name	Technology Type	Array Design REF	Protocol REF	Array Data File	Comment [ArrayExpress FTP file]	Factor Value[growth condition]	Factor Value[genotype]
AGO1 adherent 	cell	Homo sapiens	ATCC	female	transfection	breast cancer	MCF-7	mock transfected - GFP	adherent culture	P-MTAB-34980	P-MTAB-34981	P-MTAB-34959	AGO1 adherent	total RNA	P-MTAB-34982	AGO1 adherent 	biotin	P-MTAB-34983	AGO1 adherent 	array assay	A-MEXP-1171	P-MTAB-34984	AGO1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3984/E-MEXP-3984.raw.1.zip	mock transfected - GFP	adherent culture
AGO2 adherent	cell	Homo sapiens	ATCC	female	transfection	breast cancer	MCF-7	mock transfected - GFP	adherent culture	P-MTAB-34980	P-MTAB-34981	P-MTAB-34959	AGO2 adherent	total RNA	P-MTAB-34982	AGO2 adherent	biotin	P-MTAB-34983	AGO2 adherent	array assay	A-MEXP-1171	P-MTAB-34984	AGO2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3984/E-MEXP-3984.raw.1.zip	mock transfected - GFP	adherent culture
AGO3 adherent	cell	Homo sapiens	ATCC	female	transfection	breast cancer	MCF-7	mock transfected - GFP	adherent culture	P-MTAB-34980	P-MTAB-34981	P-MTAB-34959	AGO3 adherent	total RNA	P-MTAB-34982	AGO3 adherent	biotin	P-MTAB-34983	AGO3 adherent	array assay	A-MEXP-1171	P-MTAB-34984	AGO3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3984/E-MEXP-3984.raw.1.zip	mock transfected - GFP	adherent culture
ASO1 Sox2 adherent	cell	Homo sapiens	ATCC	female	transfection	breast cancer	MCF-7	Sox2	adherent culture	P-MTAB-34980	P-MTAB-34981	P-MTAB-34959	ASO1 Sox2 adherent	total RNA	P-MTAB-34982	ASO1 Sox2 adherent	biotin	P-MTAB-34983	ASO1 Sox2 adherent	array assay	A-MEXP-1171	P-MTAB-34984	ASO1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3984/E-MEXP-3984.raw.1.zip	Sox2	adherent culture
ASO2 Sox2 adherent	cell	Homo sapiens	ATCC	female	transfection	breast cancer	MCF-7	Sox2	adherent culture	P-MTAB-34980	P-MTAB-34981	P-MTAB-34959	ASO2 Sox2 adherent	total RNA	P-MTAB-34982	ASO2 Sox2 adherent	biotin	P-MTAB-34983	ASO2 Sox2 adherent	array assay	A-MEXP-1171	P-MTAB-34984	ASO2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3984/E-MEXP-3984.raw.1.zip	Sox2	adherent culture
GO1 mammospheres	cell	Homo sapiens	ATCC	female	transfection	breast cancer	MCF-7	mock transfected - GFP	suspension culture (mammospheres)	P-MTAB-34980	P-MTAB-34981	P-MTAB-34959	GO1 mammospheres	total RNA	P-MTAB-34982	GO1 mammospheres	biotin	P-MTAB-34983	GO1 mammospheres 	array assay	A-MEXP-1171	P-MTAB-34984	GO1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3984/E-MEXP-3984.raw.1.zip	mock transfected - GFP	suspension culture (mammospheres)
GO2 mammospheres  	cell	Homo sapiens	ATCC	female	transfection	breast cancer	MCF-7	mock transfected - GFP	suspension culture (mammospheres)	P-MTAB-34980	P-MTAB-34981	P-MTAB-34959	GO2 mammospheres	total RNA	P-MTAB-34982	GO2 mammospheres  	biotin	P-MTAB-34983	GO2 mammospheres	array assay	A-MEXP-1171	P-MTAB-34984	GO2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3984/E-MEXP-3984.raw.1.zip	mock transfected - GFP	suspension culture (mammospheres)
GO3 mammospheres	cell	Homo sapiens	ATCC	female	transfection	breast cancer	MCF-7	mock transfected - GFP	suspension culture (mammospheres)	P-MTAB-34980	P-MTAB-34981	P-MTAB-34959	GO3 mammospheres	total RNA	P-MTAB-34982	GO3 mammospheres	biotin	P-MTAB-34983	GO3 mammospheres	array assay	A-MEXP-1171	P-MTAB-34984	GO3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3984/E-MEXP-3984.raw.1.zip	mock transfected - GFP	suspension culture (mammospheres)
SO1 mammospheres Sox2	cell	Homo sapiens	ATCC	female	transfection	breast cancer	MCF-7	Sox2	suspension culture (mammospheres)	P-MTAB-34980	P-MTAB-34981	P-MTAB-34959	SO1 mammospheres Sox2	total RNA	P-MTAB-34982	SO1 mammospheres Sox2	biotin	P-MTAB-34983	SO1 mammospheres Sox2 	array assay	A-MEXP-1171	P-MTAB-34984	SO1.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3984/E-MEXP-3984.raw.1.zip	Sox2	suspension culture (mammospheres)
SO2 mammospheres Sox2	cell	Homo sapiens	ATCC	female	transfection	breast cancer	MCF-7	Sox2	suspension culture (mammospheres)	P-MTAB-34980	P-MTAB-34981	P-MTAB-34959	SO2 mammospheres Sox2	total RNA	P-MTAB-34982	SO2 mammospheres Sox2	biotin	P-MTAB-34983	SO2 mammospheres Sox2	array assay	A-MEXP-1171	P-MTAB-34984	SO2.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3984/E-MEXP-3984.raw.1.zip	Sox2	suspension culture (mammospheres)
SO3 mammospheres Sox2	cell	Homo sapiens	ATCC	female	transfection	breast cancer	MCF-7	Sox2	suspension culture (mammospheres)	P-MTAB-34980	P-MTAB-34981	P-MTAB-34959	SO3 mammospheres Sox2	total RNA	P-MTAB-34982	SO3 mammospheres Sox2	biotin	P-MTAB-34983	SO3 mammospheres Sox2	array assay	A-MEXP-1171	P-MTAB-34984	SO3.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3984/E-MEXP-3984.raw.1.zip	Sox2	suspension culture (mammospheres)