Source Name Characteristics [CellLine] Term Source REF Term Accession Number Characteristics [BioSourceType] Characteristics [CellType] Characteristics [Organism] Term Source REF Term Accession Number Characteristics [GeneticModification] Term Source REF Term Accession Number Description Protocol REF Protocol REF Sample Name Protocol REF Parameter Value [Amplification] Parameter Value [Extracted product] Extract Name Material Type Protocol REF Parameter Value [Label used] Parameter Value [Amplification] Labeled Extract Name Label Material Type Protocol REF Hybridization Name Array Design REF Protocol REF Factor Value [GeneticModification] Term Source REF Term Accession Number Factor Value [Time] Unit [TimeUnit] Scan Name Array Data File Comment [ArrayExpress FTP file] Homo sapiens HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9751 P-MEXP-9661 S14 control 24hrs P-MEXP-9622 RNA polymerases total RNA E14 control 24hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE14 control 24hrs biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H14 control 24hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 24 h H14 control 24hrs_scan E-co24hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179731 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9751 P-MEXP-9658 S11 control 4hrs P-MEXP-9622 RNA polymerases total RNA E11 control 4hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE11 control 4hrs biotin total_RNA P-MEXP-9624 H11 control 4hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 4 h H11 control 4hrs_scan E-co04hr.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179725 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 chronic neurodegenerative disease model P-MEXP-9753 P-MEXP-9660 S5 test 16hrs P-MEXP-9622 RNA polymerases total RNA E5 test 16hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE5 test 16hrs biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H5 test 16hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 16 h H5 test 16hrs_scan L-co16hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179735 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9751 P-MEXP-9662 S15 control 48hrs P-MEXP-9622 RNA polymerases total RNA E15 control 48hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE15 control 48hrs biotin total_RNA P-MEXP-9624 H15 control 48hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 48 h H15 control 48hrs_scan E-co48hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179728 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 chronic neurodegenerative disease model P-MEXP-9753 P-MEXP-9663 S8 test 72hrs P-MEXP-9622 RNA polymerases total RNA E8 test 72hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE8 test 72hrs biotin total_RNA P-MEXP-9624 H8 test 72hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 72 h H8 test 72hrs_scan L-co72hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179729 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9751 P-MEXP-9656 S9 control 0hrs P-MEXP-9622 RNA polymerases total RNA E9 control 0hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE9 control 0hrs biotin total_RNA P-MEXP-9624 H9 control 0hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 0 h H9 control 0hrs_scan E-co00hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179724 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 chronic neurodegenerative disease model P-MEXP-9753 P-MEXP-9659 S4 test 8hrs P-MEXP-9622 RNA polymerases total RNA E4 test 8hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE4 test 8hrs biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H4 test 8hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 8 h H4 test 8hrs_scan L-co08hr.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179727 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 chronic neurodegenerative disease model P-MEXP-9753 P-MEXP-9662 S7 test 48hrs P-MEXP-9622 RNA polymerases total RNA E7 test 48 hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE7 test 48 hrs biotin total_RNA P-MEXP-9624 H7 test 48hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 48 h H7 test 48hrs_scan L-co48hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179736 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9751 P-MEXP-9663 S16 control 72hrs P-MEXP-9622 RNA polymerases total RNA E16 control 72hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE16 control 72hrs biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H16 control 72hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 72 h H16 control 72hrs_scan E-co72hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179732 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9751 P-MEXP-9659 S12 control 8 hrs P-MEXP-9622 RNA polymerases total RNA E12 control 8hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE12 control 8hrs biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H12 control 8hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 8 h H12 control 8hrs_scan E-co08hr.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179730 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9751 P-MEXP-9657 S10 control 2hrs P-MEXP-9622 RNA polymerases total RNA E10 control 2hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE10 control 2hrs biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H10 control 2hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 2 h H10 control 2hrs_scan E-co02hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179722 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9753 P-MEXP-9657 S2 test 2hrs P-MEXP-9622 RNA polymerases total RNA E2 test 2hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE2 test 2hrs biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H2 test 2hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 2 h H2 test 2hrs_scan L-co02hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179723 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9753 P-MEXP-9658 S3 test 4hrs P-MEXP-9622 RNA polymerases total RNA E3 test 4hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE3 test 4hrs biotin total_RNA P-MEXP-9624 H3 test 4hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 4 h H3 test 4hrs_scan L-co04hr.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179721 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9753 P-MEXP-9656 S1 test 0hrs P-MEXP-9622 RNA polymerases total RNA E1 test 0hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE1 test 0hrs biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H1 test 0hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 0 h H1 test 0hrs_scan L-co00hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179726 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9753 P-MEXP-9661 S6 test 24hrs P-MEXP-9622 RNA polymerases total RNA E6 test 24 hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE6 test 24 hrs biotin total_RNA Affymetrix:Protocol:Hybridization-Unknown H6 test 24hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 24 h H6 test 24hrs_scan L-co24hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip Homo sapiens__S:BioSource:MEXP:179733 HEK293 EFO EFO_0001182 fresh_sample human embryonic kidney cells Homo sapiens EFO http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606 transfection EFO EFO_0000726 P-MEXP-9751 P-MEXP-9660 S13 control 16hrs P-MEXP-9622 RNA polymerases total RNA E13 control 16hrs total_RNA P-MEXP-9623 biotin RNA polymerases LE13 control 16hrs biotin total_RNA P-MEXP-9624 H13 control 16hrs A-AFFY-33 P-AFFY-6 transfection EFO EFO_0000726 16 h H13 control 16hrs_scan E-co16hrs.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-389/E-MEXP-389.raw.1.zip