Source Name	Material Type	Characteristics[organism]	Provider	Characteristics[biosource type]	Characteristics[developmental stage]	Characteristics[organism part]	Characteristics[sex]	Characteristics[individual]	Characteristics[stimulus]	Characteristics[disease]	Characteristics[strain]	Protocol REF	Protocol REF	Protocol REF	Extract Name	Material Type	Protocol REF	Term Source REF	LabeledExtract Name	Label	Protocol REF	Hybridization Name	Array Design REF	Protocol REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Derived Array Data Matrix File	Comment [Derived ArrayExpress Data Matrix FTP file]	Factor Value[disease]
Mouse_Intestine_BM1	organism part	Mus musculus	Charles River Laboratory	fresh sample	adult	intestine	female	BM1	no T-cells	normal	BALB/c (H-2Kd, Thy-1.2) 	P-MTAB-30627	P-MTAB-30630	P-MTAB-30628	Mouse_Intestine_BM1	total_RNA	P-AFFY-2	ArrayExpress	Mouse_Intestine_BM1	biotin	P-MTAB-30629	Mouse_Intestine_BM1_1	A-AFFY-130	P-MTAB-30625	Mouse_Intestine_BM1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.raw.1.zip	P-MTAB-30626	StudyZeiser.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.processed.1.zip	normal
Mouse_Intestine_BM2 	organism part	Mus musculus	Charles River Laboratory 	fresh sample	adult	intestine	female	BM2	no T-cells	normal	BALB/c (H-2Kd, Thy-1.2) 	P-MTAB-30627	P-MTAB-30630	P-MTAB-30628	Mouse_Intestine_BM2	total_RNA	P-AFFY-2	ArrayExpress	Mouse_Intestine_BM2 	biotin	P-MTAB-30629	Mouse_Intestine_BM2_2	A-AFFY-130	P-MTAB-30625	Mouse_Intestine_BM2.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.raw.1.zip	P-MTAB-30626	StudyZeiser.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.processed.1.zip	normal
Mouse_Intestine_BM3 	organism part	Mus musculus	Charles River Laboratory 	fresh sample	adult	intestine	female	BM3	no T-cells	normal	BALB/c (H-2Kd, Thy-1.2) 	P-MTAB-30627	P-MTAB-30630	P-MTAB-30628	Mouse_Intestine_BM3	total_RNA	P-AFFY-2	ArrayExpress	Mouse_Intestine_BM3 	biotin	P-MTAB-30629	Mouse_Intestine_BM3_3	A-AFFY-130	P-MTAB-30625	Mouse_Intestine_BM3.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.raw.1.zip	P-MTAB-30626	StudyZeiser.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.processed.1.zip	normal
Mouse_Intestine_GvHD1 	organism part	Mus musculus	Charles River Laboratory 	fresh sample	adult	intestine	female	GVHD1	T-cells	acute graft versus host disease 	BALB/c (H-2Kd, Thy-1.2) 	P-MTAB-30627	P-MTAB-30630	P-MTAB-30628	Mouse_Intestine_GvHD1	total_RNA	P-AFFY-2	ArrayExpress	Mouse_Intestine_GvHD1 	biotin	P-MTAB-30629	Mouse_Intestine_GvHD1_4	A-AFFY-130	P-MTAB-30625	Mouse_Intestine_GvHD1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.raw.1.zip	P-MTAB-30626	StudyZeiser.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.processed.1.zip	acute graft versus host disease 
Mouse_Intestine_GvHD2 	organism part	Mus musculus	Charles River Laboratory 	fresh sample	adult	intestine	female	GVHD2	T-cells	acute graft versus host disease 	BALB/c (H-2Kd, Thy-1.2) 	P-MTAB-30627	P-MTAB-30630	P-MTAB-30628	Mouse_Intestine_GvHD2	total_RNA	P-AFFY-2	ArrayExpress	Mouse_Intestine_GvHD2 	biotin	P-MTAB-30629	Mouse_Intestine_GvHD2_5	A-AFFY-130	P-MTAB-30625	Mouse_Intestine_GvHD2.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.raw.1.zip	P-MTAB-30626	StudyZeiser.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.processed.1.zip	acute graft versus host disease 
Mouse_Intestine_GvHD3 	organism part	Mus musculus	Charles River Laboratory 	fresh sample	adult	intestine	female	GVHD3	T-cells	acute graft versus host disease 	BALB/c (H-2Kd, Thy-1.2) 	P-MTAB-30627	P-MTAB-30630	P-MTAB-30628	Mouse_Intestine_GvHD3	total_RNA	P-AFFY-2	ArrayExpress	Mouse_Intestine_GvHD3 	biotin	P-MTAB-30629	Mouse_Intestine_GvHD3_6	A-AFFY-130	P-MTAB-30625	Mouse_Intestine_GvHD3.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.raw.1.zip	P-MTAB-30626	StudyZeiser.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-3807/E-MEXP-3807.processed.1.zip	acute graft versus host disease