Source Name Characteristics [DiseaseState] Characteristics [BioSourceType] Characteristics [TargetedCellType] Characteristics [Organism] Sample Name Protocol REF Parameter Value [Amplification] Parameter Value [Extracted product] Protocol REF Extract Name Material Type Protocol REF Parameter Value [Amount of nucleic acid labeled] Parameter Value [Amplification] Parameter Value [Label used] Labeled Extract Name Label Material Type Protocol REF Hybridization Name Array Design REF Comment [Array Design URI] Protocol REF Scan Name Array Data File Comment [ArrayExpress FTP file] Protocol REF Derived Array Data Matrix File Comment [Derived ArrayExpress FTP file] Homo sapiens MDS-associated acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens MDS-8 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1405SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1822EXTRACT1405SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1571MDS-08.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 MDS-08 E-MEXP-25-raw-data-270983329.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166921 MDS-associated acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens MDS-9 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1406SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1823EXTRACT1406SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1572MDS-09.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 MDS-09 E-MEXP-25-raw-data-270983608.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166916 MDS-associated acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens MDS-4 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1401SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1818EXTRACT1401SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1567MDS-04.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 MDS-04 E-MEXP-25-raw-data-270981638.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166913 MDS-associated acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens MDS-1 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 MDS1extract total_RNA P-MEXP-1626 1 none biotin LABEL1797EXTRACT1398SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1564MDS-01.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 MDS-01 E-MEXP-25-raw-data-270981151.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166930 acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens AML-8 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1415SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1832EXTRACT1415SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1581AML-08.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 AML-08 E-MEXP-25-raw-data-270986609.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166927 acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens AML-5 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1412SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1829EXTRACT1412SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1578AML-05EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 AML-05 E-MEXP-25-raw-data-270985774.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166919 MDS-associated acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens MDS-7 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1404SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1821EXTRACT1404SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1570MDS-07.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 MDS-07 E-MEXP-25-raw-data-270983060.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166926 acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens AML-4 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1411SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1828EXTRACT1411SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1577AML-04.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 AML-04 E-MEXP-25-raw-data-270985491.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166924 acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens AML-2 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1409SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1826EXTRACT1409SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1575AML-02.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 AML-02 E-MEXP-25-raw-data-270984963.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166925 acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens AML-3 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1410SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1827EXTRACT1410SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1576AML-03.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 AML-03 E-MEXP-25-raw-data-270985219.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166914 MDS-associated acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens MDS-2 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1399SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1798EXTRACT1399SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1565MDS-02.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 MDS-02 E-MEXP-25-raw-data-270981279.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166931 acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens AML-9 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1416SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1833EXTRACT1416SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1582AML-09.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 AML-09 E-MEXP-25-raw-data-270986873.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166928 acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens AML-6 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1413SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1830EXTRACT1413SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1579AML-06.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 AML-06 E-MEXP-25-raw-data-270986044.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166929 acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens AML-7 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1414SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1831EXTRACT1414SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1580AML-07.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 AML-07 E-MEXP-25-raw-data-270986321.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.1.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166932 acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens AML-10 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1417SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1834EXTRACT1417SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1583AML-10.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 AML-10 P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166922 MDS-associated acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens MDS-10 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1407SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1824EXTRACT1407SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1573MDS-10.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 MDS-10 E-MEXP-25-raw-data-270983873.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.2.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166915 MDS-associated acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens MDS-3 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1400SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1817EXTRACT1400SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1566MDS-03.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 MDS-03 E-MEXP-25-raw-data-270981444.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.2.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166923 acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens AML-1 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1408SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1825EXTRACT1408SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1574AML-01.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 AML-01 E-MEXP-25-raw-data-270984770.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.2.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166917 MDS-associated acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens MDS-5 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1402SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1819EXTRACT1402SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1568MDS-05.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 MDS-05 E-MEXP-25-raw-data-270982488.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.2.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip Homo sapiens__S:BioSource:MEXP:166918 MDS-associated acute myeloid leukemia frozen_sample hematopoietic stem cell-fraction Homo sapiens MDS-6 P-MEXP-1625 RNA polymerases total RNA P-MEXP-1624 EXTRACT1403SUB326 total_RNA P-MEXP-1626 1 none biotin LABEL1820EXTRACT1403SUB326 Biotin total_RNA Affymetrix:Protocol:Hybridization-EukGE-WS2v4 1569MDS-06.EXP A-AFFY-1 http://www.ebi.ac.uk/aerep/result?queryFor=PhysicalArrayDesign&aAccession=A-AFFY-1 P-AFFY-6 MDS-06 E-MEXP-25-raw-data-270982783.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.raw.2.zip P-AFFY-7 E-MEXP-25-processed-data-1341915084.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/MEXP/E-MEXP-25/E-MEXP-25.processed.1.zip