Source Name Comment [Sample_source_name] Comment [Sample_title] Characteristics [Sex] Term Source REF Term Accession Number Characteristics [age] Characteristics [corticosteroids] Characteristics [idh1 status] Characteristics [kps] Characteristics [mgmt status] Characteristics [mmse] Characteristics [organism] Term Source REF Term Accession Number Characteristics [os event type 0 = censored] Characteristics [os time to event months] Characteristics [pfs event type 0 = censored] Characteristics [pfs time to event months] Characteristics [phillips subtype] Characteristics [rpa class] Characteristics [surgical status] Characteristics [tcga subtype] Characteristics [who] Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [Sex] Term Source REF Term Accession Number FactorValue [age] FactorValue [corticosteroids] FactorValue [idh1 status] FactorValue [kps] FactorValue [mgmt status] FactorValue [mmse] FactorValue [os event type 0 = censored] FactorValue [os time to event months] FactorValue [pfs event type 0 = censored] FactorValue [pfs time to event months] FactorValue [phillips subtype] FactorValue [rpa class] FactorValue [surgical status] FactorValue [tcga subtype] FactorValue [treatment] Term Source REF Term Accession Number FactorValue [who] GSM2225633 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 349 female EFO http://purl.obolibrary.org/obo/PATO_0000383 56 Off Wild type 50-80 Missing NA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.39 1 7.3 Proneural Grade V Partial resection Proneural 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225633 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225633 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225633 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225633_20130521_gbm-2_2_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225633_sample_table.txt norm GSM2225633_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 56 Off Wild type 50-80 Missing NA 1 14.39 1 7.3 Proneural Grade V Partial resection Proneural Bevacizumab 2 GSM2225632 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 348 female EFO http://purl.obolibrary.org/obo/PATO_0000383 56 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.11 1 4 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225632 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225632 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225632 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225632_20130521_gbm-2_2_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225632_sample_table.txt norm GSM2225632_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 56 Off Wild type 90-100 Missing >=27 1 8.11 1 4 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225631 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 347 male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 6.97 1 2.3 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225631 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225631 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225631 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225631_20130521_gbm-2_2_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225631_sample_table.txt norm GSM2225631_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Non-methylated >=27 1 6.97 1 2.3 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225630 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 346 male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 On Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 25.2 0 0 Proneural Grade IV Partial resection Neural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225630 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225630 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225630 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225630_20130521_gbm-2_2_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225630_sample_table.txt norm GSM2225630_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 On Wild type 50-80 Methylated >=27 0 25.2 0 0 Proneural Grade IV Partial resection Neural Bevacizumab 1 GSM2225629 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 345 female EFO http://purl.obolibrary.org/obo/PATO_0000383 33 On Mutant 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.03 1 13 Proneural NA NA Proneural NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225629 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225629 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225629 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225629_20130521_gbm-2_2_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225629_sample_table.txt norm GSM2225629_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 33 On Mutant 90-100 Methylated >=27 1 16.03 1 13 Proneural NA NA Proneural Bevacizumab NA GSM2225628 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 344 female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 Off Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 30.09 0 18.4 Proliferative Grade V Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225628 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225628 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225628 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225628_20130521_gbm-2_2_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225628_sample_table.txt norm GSM2225628_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 Off Wild type 50-80 Methylated <27 0 30.09 0 18.4 Proliferative Grade V Partial resection Mesenchymal Bevacizumab 1 GSM2225627 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 343 male EFO http://purl.obolibrary.org/obo/PATO_0000384 48 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.59 1 10 Proneural Grade III Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225627 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225627 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225627 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225627_20130521_gbm-2_2_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225627_sample_table.txt norm GSM2225627_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 48 On Wild type 90-100 Methylated >=27 1 16.59 1 10 Proneural Grade III Complete resection Proneural placebo EFO EFO_0001674 0 GSM2225626 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 342 female EFO http://purl.obolibrary.org/obo/PATO_0000383 41 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 24.15 0 12.2 Mesenchymal Grade III Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225626 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225626 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225626 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225626_20130521_gbm-2_2_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225626_sample_table.txt norm GSM2225626_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 41 On Wild type 90-100 Non-methylated >=27 0 24.15 0 12.2 Mesenchymal Grade III Complete resection Classical placebo EFO EFO_0001674 0 GSM2225625 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 341 male EFO http://purl.obolibrary.org/obo/PATO_0000384 69 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 2.69 1 2.2 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225625 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225625 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225625 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225625_20130521_gbm-1_1_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225625_sample_table.txt norm GSM2225625_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 69 Off Wild type 50-80 Non-methylated >=27 1 2.69 1 2.2 Proneural Grade IV Partial resection Proneural Bevacizumab 1 GSM2225624 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 340 female EFO http://purl.obolibrary.org/obo/PATO_0000383 49 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 19.78 1 12.5 Mesenchymal Grade III Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225624 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225624 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225624 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225624_20130521_gbm-1_1_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225624_sample_table.txt norm GSM2225624_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 49 Off Wild type 90-100 Methylated >=27 1 19.78 1 12.5 Mesenchymal Grade III Partial resection Mesenchymal Bevacizumab 0 GSM2225623 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 339 male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 25.43 1 9.8 Mesenchymal Grade V Complete resection Unclassified 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225623 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225623 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225623 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225623_20130521_gbm-1_1_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225623_sample_table.txt norm GSM2225623_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 50-80 Methylated <27 0 25.43 1 9.8 Mesenchymal Grade V Complete resection Unclassified placebo EFO EFO_0001674 1 GSM2225622 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 338 female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.64 1 8.2 Unclassified Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225622 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225622 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225622 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225622_20130521_gbm-1_1_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225622_sample_table.txt norm GSM2225622_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 On Wild type 90-100 Methylated >=27 1 8.64 1 8.2 Unclassified Grade IV Partial resection Classical placebo EFO EFO_0001674 0 GSM2225621 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 337 female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 On Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 28.81 0 18.2 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225621 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225621 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225621 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225621_20130521_gbm-1_1_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225621_sample_table.txt norm GSM2225621_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 On Wild type 50-80 Missing >=27 0 28.81 0 18.2 Proneural Grade IV Partial resection Proneural Bevacizumab 1 GSM2225620 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 336 female EFO http://purl.obolibrary.org/obo/PATO_0000383 46 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 27.2 1 2.1 Proliferative Grade III Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225620 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225620 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225620 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225620_20130521_gbm-1_1_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225620_sample_table.txt norm GSM2225620_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 46 On Wild type 90-100 Methylated >=27 0 27.2 1 2.1 Proliferative Grade III Partial resection Classical placebo EFO EFO_0001674 0 GSM2225619 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 335 male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.47 1 10.3 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225619 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225619 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225619 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225619_20130521_gbm-1_1_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225619_sample_table.txt norm GSM2225619_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 Off Wild type 50-80 Non-methylated >=27 1 13.47 1 10.3 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225618 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 334 male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 21.55 1 12.2 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225618 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225618 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225618 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225618_20130521_gbm-1_1_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225618_sample_table.txt norm GSM2225618_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 On Wild type 90-100 Non-methylated >=27 1 21.55 1 12.2 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 0 GSM2225617 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 333 male EFO http://purl.obolibrary.org/obo/PATO_0000384 39 Off Mutant 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 23.23 0 11.4 Proneural NA NA Proneural NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225617 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225617 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225617 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225617_20130521_gbm-1_1_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225617_sample_table.txt norm GSM2225617_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 39 Off Mutant 90-100 Non-methylated >=27 0 23.23 0 11.4 Proneural NA NA Proneural placebo EFO EFO_0001674 NA GSM2225616 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 332 male EFO http://purl.obolibrary.org/obo/PATO_0000384 62 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.15 1 12 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225616 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225616 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225616 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225616_20130521_gbm-1_1_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225616_sample_table.txt norm GSM2225616_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 62 Off Wild type 90-100 Non-methylated >=27 1 17.15 1 12 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225615 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 331 female EFO http://purl.obolibrary.org/obo/PATO_0000383 74 On Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.04 1 7.9 Proneural Grade V Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225615 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225615 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225615 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225615_20130520_gbm-4_4_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225615_sample_table.txt norm GSM2225615_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 74 On Wild type 90-100 Non-methylated <27 1 11.04 1 7.9 Proneural Grade V Partial resection Proneural Bevacizumab 0 GSM2225614 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 330 male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 On Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 7.89 1 1.9 Proliferative Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225614 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225614 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225614 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225614_20130520_gbm-4_4_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225614_sample_table.txt norm GSM2225614_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 On Wild type 50-80 Methylated >=27 1 7.89 1 1.9 Proliferative Grade IV Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225613 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 329 male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 23.95 0 11.9 Proneural Grade IV Partial resection Neural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225613 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225613 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225613 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225613_20130520_gbm-4_4_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225613_sample_table.txt norm GSM2225613_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Methylated >=27 0 23.95 0 11.9 Proneural Grade IV Partial resection Neural placebo EFO EFO_0001674 1 GSM2225612 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 328 female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 Off Wild type 90-100 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 19.81 1 16.2 Proneural Grade V Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225612 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225612 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225612 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225612_20130520_gbm-4_4_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225612_sample_table.txt norm GSM2225612_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 Off Wild type 90-100 Methylated <27 1 19.81 1 16.2 Proneural Grade V Partial resection Proneural Bevacizumab 1 GSM2225611 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 327 male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 19.65 1 11.9 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225611 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225611 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225611 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225611_20130520_gbm-4_4_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225611_sample_table.txt norm GSM2225611_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 90-100 Missing >=27 1 19.65 1 11.9 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 0 GSM2225610 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 326 female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 24.41 0 12.1 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225610 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225610 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225610 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225610_20130520_gbm-4_4_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225610_sample_table.txt norm GSM2225610_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 Off Wild type 90-100 Methylated >=27 0 24.41 0 12.1 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225609 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 325 female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.91 1 6.1 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225609 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225609 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225609 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225609_20130520_gbm-4_4_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225609_sample_table.txt norm GSM2225609_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 Off Wild type 90-100 Methylated >=27 1 10.91 1 6.1 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225608 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 324 male EFO http://purl.obolibrary.org/obo/PATO_0000384 69 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.04 1 4 Proneural Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225608 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225608 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225608 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225608_20130520_gbm-4_4_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225608_sample_table.txt norm GSM2225608_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 69 On Wild type 90-100 Non-methylated >=27 1 13.04 1 4 Proneural Grade IV Partial resection Classical placebo EFO EFO_0001674 0 GSM2225607 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 323 male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 6.7 1 5.7 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225607 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225607 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225607 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225607_20130520_gbm-4_4_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225607_sample_table.txt norm GSM2225607_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 50-80 Methylated >=27 1 6.7 1 5.7 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225606 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 322 female EFO http://purl.obolibrary.org/obo/PATO_0000383 71 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 21.36 1 14.3 Unclassified Grade IV Complete resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225606 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225606 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225606 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225606_20130520_gbm-4_4_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225606_sample_table.txt norm GSM2225606_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 71 Off Wild type 90-100 Non-methylated >=27 1 21.36 1 14.3 Unclassified Grade IV Complete resection Unclassified Bevacizumab 0 GSM2225605 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 321 male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.38 1 13.5 Proliferative Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225605 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225605 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225605 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225605_20130520_gbm-4_4_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225605_sample_table.txt norm GSM2225605_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 90-100 Non-methylated >=27 1 15.38 1 13.5 Proliferative Grade IV Partial resection Classical Bevacizumab 0 GSM2225604 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 320 male EFO http://purl.obolibrary.org/obo/PATO_0000384 74 Off Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 28.68 1 16.5 Proneural Grade V Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225604 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225604 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225604 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225604_20130520_gbm-4_4_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225604_sample_table.txt norm GSM2225604_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 74 Off Wild type 50-80 Non-methylated <27 0 28.68 1 16.5 Proneural Grade V Partial resection Proneural Bevacizumab 1 GSM2225603 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 319 male EFO http://purl.obolibrary.org/obo/PATO_0000384 62 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.69 1 11.2 Proliferative Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225603 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225603 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225603 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225603_20130520_gbm-3_3_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225603_sample_table.txt norm GSM2225603_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 62 On Wild type 90-100 Non-methylated >=27 1 14.69 1 11.2 Proliferative Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225602 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 318 male EFO http://purl.obolibrary.org/obo/PATO_0000384 22 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 28.88 0 16.4 Proneural Grade III Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225602 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225602 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225602 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225602_20130520_gbm-3_3_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225602_sample_table.txt norm GSM2225602_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 22 On Wild type 90-100 Non-methylated >=27 0 28.88 0 16.4 Proneural Grade III Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225601 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 317 male EFO http://purl.obolibrary.org/obo/PATO_0000384 46 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9.69 1 3.7 Proliferative Grade III Complete resection Neural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225601 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225601 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225601 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225601_20130520_gbm-3_3_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225601_sample_table.txt norm GSM2225601_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 46 Off Wild type 90-100 Non-methylated <27 1 9.69 1 3.7 Proliferative Grade III Complete resection Neural placebo EFO EFO_0001674 0 GSM2225600 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 316 male EFO http://purl.obolibrary.org/obo/PATO_0000384 39 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.78 1 10 Proneural Grade III Biopsy Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225600 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225600 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225600 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225600_20130520_gbm-3_3_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225600_sample_table.txt norm GSM2225600_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 39 Off Wild type 90-100 Non-methylated <27 1 12.78 1 10 Proneural Grade III Biopsy Proneural placebo EFO EFO_0001674 0 GSM2225599 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 315 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.41 1 2.3 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225599 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225599 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225599 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225599_20130520_gbm-3_3_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225599_sample_table.txt norm GSM2225599_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 90-100 Non-methylated >=27 1 15.41 1 2.3 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225598 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 314 female EFO http://purl.obolibrary.org/obo/PATO_0000383 61 Off Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 22.57 1 3.8 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225598 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225598 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225598 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225598_20130520_gbm-3_3_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225598_sample_table.txt norm GSM2225598_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 61 Off Wild type 50-80 Missing >=27 1 22.57 1 3.8 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 1 GSM2225597 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 313 female EFO http://purl.obolibrary.org/obo/PATO_0000383 68 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 24.97 0 17.4 Mesenchymal Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225597 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225597 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225597 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225597_20130520_gbm-3_3_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225597_sample_table.txt norm GSM2225597_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 68 On Wild type 90-100 Methylated >=27 1 24.97 0 17.4 Mesenchymal Grade IV Partial resection Classical Bevacizumab 0 GSM2225596 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 312 female EFO http://purl.obolibrary.org/obo/PATO_0000383 62 On Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.62 1 7.8 Unclassified Grade IV Complete resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225596 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225596 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225596 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225596_20130520_gbm-3_3_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225596_sample_table.txt norm GSM2225596_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 62 On Wild type 50-80 Methylated >=27 1 14.62 1 7.8 Unclassified Grade IV Complete resection Proneural Bevacizumab 1 GSM2225595 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 311 male EFO http://purl.obolibrary.org/obo/PATO_0000384 71 Off Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.87 1 6.3 Proneural Grade V Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225595 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225595 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225595 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225595_20130520_gbm-3_3_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225595_sample_table.txt norm GSM2225595_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 71 Off Wild type 50-80 Non-methylated <27 1 10.87 1 6.3 Proneural Grade V Partial resection Classical placebo EFO EFO_0001674 1 GSM2225594 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 310 female EFO http://purl.obolibrary.org/obo/PATO_0000383 55 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.5 1 2 Proneural Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225594 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225594 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225594 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225594_20130520_gbm-3_3_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225594_sample_table.txt norm GSM2225594_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 55 Off Wild type 90-100 Non-methylated >=27 1 11.5 1 2 Proneural Grade IV Complete resection Proneural placebo EFO EFO_0001674 0 GSM2225593 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 309 male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 22.67 1 2.4 Mesenchymal Grade V Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225593 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225593 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225593 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225593_20130520_gbm-3_3_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225593_sample_table.txt norm GSM2225593_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 Off Wild type 90-100 Non-methylated <27 1 22.67 1 2.4 Mesenchymal Grade V Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225592 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 308 male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 20.53 1 12 Mesenchymal Grade V Biopsy Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225592 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225592 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225592 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225592_20130520_gbm-3_3_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225592_sample_table.txt norm GSM2225592_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 On Wild type 50-80 Non-methylated >=27 1 20.53 1 12 Mesenchymal Grade V Biopsy Mesenchymal Bevacizumab 1 GSM2225591 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 307 male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 Off Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.25 1 4.2 Mesenchymal Grade V Complete resection Mesenchymal 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225591 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225591 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225591 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225591_20130520_gbm-2_2_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225591_sample_table.txt norm GSM2225591_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 Off Wild type 50-80 Missing <27 1 8.25 1 4.2 Mesenchymal Grade V Complete resection Mesenchymal placebo EFO EFO_0001674 2 GSM2225590 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 306 male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.96 1 5.6 Proneural Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225590 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225590 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225590 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225590_20130520_gbm-2_2_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225590_sample_table.txt norm GSM2225590_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 Off Wild type 90-100 Non-methylated >=27 1 11.96 1 5.6 Proneural Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225589 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 305 female EFO http://purl.obolibrary.org/obo/PATO_0000383 72 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.68 1 9.8 Mesenchymal Grade V Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225589 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225589 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225589 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225589_20130520_gbm-2_2_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225589_sample_table.txt norm GSM2225589_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 72 Off Wild type 90-100 Non-methylated <27 1 12.68 1 9.8 Mesenchymal Grade V Complete resection Mesenchymal Bevacizumab 1 GSM2225588 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 304 male EFO http://purl.obolibrary.org/obo/PATO_0000384 37 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 23.49 1 9.8 Mesenchymal Grade III Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225588 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225588 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225588 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225588_20130520_gbm-2_2_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225588_sample_table.txt norm GSM2225588_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 37 Off Wild type 90-100 Missing >=27 1 23.49 1 9.8 Mesenchymal Grade III Complete resection Mesenchymal Bevacizumab 0 GSM2225587 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 303 female EFO http://purl.obolibrary.org/obo/PATO_0000383 51 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 17.35 1 9.9 Proliferative Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225587 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225587 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225587 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225587_20130520_gbm-2_2_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225587_sample_table.txt norm GSM2225587_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 51 On Wild type 90-100 Non-methylated >=27 0 17.35 1 9.9 Proliferative Grade IV Partial resection Classical placebo EFO EFO_0001674 0 GSM2225586 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 302 male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.08 1 7.9 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225586 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225586 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225586 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225586_20130520_gbm-2_2_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225586_sample_table.txt norm GSM2225586_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 90-100 Non-methylated >=27 1 15.08 1 7.9 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225585 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 301 female EFO http://purl.obolibrary.org/obo/PATO_0000383 67 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 27.66 1 11.3 Mesenchymal Grade V Biopsy Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225585 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225585 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225585 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225585_20130520_gbm-2_2_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225585_sample_table.txt norm GSM2225585_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 67 On Wild type 90-100 Methylated >=27 0 27.66 1 11.3 Mesenchymal Grade V Biopsy Mesenchymal Bevacizumab 0 GSM2225584 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 300 male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.42 1 6.1 Proliferative Grade III Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225584 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225584 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225584 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225584_20130520_gbm-2_2_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225584_sample_table.txt norm GSM2225584_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Missing >=27 1 12.42 1 6.1 Proliferative Grade III Partial resection Classical Bevacizumab 0 GSM2225583 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 299 male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.34 1 2.3 Proneural Grade IV Complete resection Proneural 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225583 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225583 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225583 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225583_20130520_gbm-2_2_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225583_sample_table.txt norm GSM2225583_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 Off Wild type 50-80 Non-methylated >=27 1 8.34 1 2.3 Proneural Grade IV Complete resection Proneural placebo EFO EFO_0001674 2 GSM2225582 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 298 male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 Off Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 28.29 1 18.3 Proneural Grade V Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225582 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225582 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225582 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225582_20130520_gbm-2_2_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225582_sample_table.txt norm GSM2225582_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 Off Wild type 50-80 Methylated <27 0 28.29 1 18.3 Proneural Grade V Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225581 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 297 male EFO http://purl.obolibrary.org/obo/PATO_0000384 38 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.77 1 9.9 Mesenchymal Grade III Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225581 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225581 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225581 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225581_20130520_gbm-2_2_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225581_sample_table.txt norm GSM2225581_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 38 Off Wild type 90-100 Non-methylated >=27 1 13.77 1 9.9 Mesenchymal Grade III Complete resection Mesenchymal Bevacizumab 0 GSM2225580 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 296 female EFO http://purl.obolibrary.org/obo/PATO_0000383 33 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 23.36 1 10.2 Mesenchymal Grade III Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225580 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225580 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225580 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225580_20130520_gbm-2_2_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225580_sample_table.txt norm GSM2225580_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 33 Off Wild type 90-100 Non-methylated >=27 0 23.36 1 10.2 Mesenchymal Grade III Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225579 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 295 male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.77 1 2.1 Mesenchymal Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225579 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225579 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225579 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225579_20130520_gbm-1_1_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225579_sample_table.txt norm GSM2225579_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 On Wild type 90-100 Non-methylated >=27 1 15.77 1 2.1 Mesenchymal Grade IV Partial resection Classical placebo EFO EFO_0001674 0 GSM2225578 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 294 male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.6 1 11.9 Unclassified Grade III Complete resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225578 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225578 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225578 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225578_20130520_gbm-1_1_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225578_sample_table.txt norm GSM2225578_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Non-methylated >=27 1 13.6 1 11.9 Unclassified Grade III Complete resection Unclassified Bevacizumab 0 GSM2225577 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 293 female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 5.75 1 5.7 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225577 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225577 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225577 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225577_20130520_gbm-1_1_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225577_sample_table.txt norm GSM2225577_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 Off Wild type 90-100 Missing >=27 1 5.75 1 5.7 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225576 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 292 male EFO http://purl.obolibrary.org/obo/PATO_0000384 34 Off Wild type 90-100 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.59 1 4.2 Proneural Grade III Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225576 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225576 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225576 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225576_20130520_gbm-1_1_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225576_sample_table.txt norm GSM2225576_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 34 Off Wild type 90-100 Missing <27 1 16.59 1 4.2 Proneural Grade III Complete resection Proneural placebo EFO EFO_0001674 0 GSM2225575 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 291 male EFO http://purl.obolibrary.org/obo/PATO_0000384 42 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 28.81 1 2.3 Unclassified Grade III Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225575 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225575 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225575 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225575_20130520_gbm-1_1_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225575_sample_table.txt norm GSM2225575_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 42 Off Wild type 90-100 Non-methylated >=27 0 28.81 1 2.3 Unclassified Grade III Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225574 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 290 female EFO http://purl.obolibrary.org/obo/PATO_0000383 58 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.7 1 3.3 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225574 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225574 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225574 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225574_20130520_gbm-1_1_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225574_sample_table.txt norm GSM2225574_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 58 On Wild type 50-80 Non-methylated >=27 1 13.7 1 3.3 Proneural Grade IV Partial resection Proneural Bevacizumab 1 GSM2225573 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 289 male EFO http://purl.obolibrary.org/obo/PATO_0000384 45 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.13 1 7.9 Mesenchymal Grade III Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225573 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225573 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225573 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225573_20130520_gbm-1_1_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225573_sample_table.txt norm GSM2225573_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 45 Off Wild type 90-100 Methylated >=27 1 16.13 1 7.9 Mesenchymal Grade III Complete resection Mesenchymal Bevacizumab 0 GSM2225572 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 288 female EFO http://purl.obolibrary.org/obo/PATO_0000383 53 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 10.02 1 7.4 Mesenchymal Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225572 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225572 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225572 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225572_20130520_gbm-1_1_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225572_sample_table.txt norm GSM2225572_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 53 On Wild type 90-100 Non-methylated >=27 0 10.02 1 7.4 Mesenchymal Grade IV Complete resection Classical placebo EFO EFO_0001674 0 GSM2225571 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 287 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 27.7 0 15.9 Proliferative Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225571 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225571 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225571 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225571_20130520_gbm-1_1_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225571_sample_table.txt norm GSM2225571_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 90-100 Non-methylated >=27 0 27.7 0 15.9 Proliferative Grade IV Complete resection Classical Bevacizumab 1 GSM2225570 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 286 female EFO http://purl.obolibrary.org/obo/PATO_0000383 60 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.83 1 7.7 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225570 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225570 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225570 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225570_20130520_gbm-1_1_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225570_sample_table.txt norm GSM2225570_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 60 Off Wild type 90-100 Non-methylated >=27 1 11.83 1 7.7 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225569 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 285 female EFO http://purl.obolibrary.org/obo/PATO_0000383 48 On Mutant 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 2.2 1 2.2 Proneural NA NA Proneural NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225569 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225569 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225569 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225569_20130517_gbm-4_4_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225569_sample_table.txt norm GSM2225569_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 48 On Mutant 50-80 Methylated >=27 1 2.2 1 2.2 Proneural NA NA Proneural placebo EFO EFO_0001674 NA GSM2225568 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 284 male EFO http://purl.obolibrary.org/obo/PATO_0000384 42 On Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.05 1 5.7 Mesenchymal Grade III Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225568 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225568 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225568 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225568_20130517_gbm-4_4_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225568_sample_table.txt norm GSM2225568_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 42 On Wild type 90-100 Missing >=27 1 10.05 1 5.7 Mesenchymal Grade III Partial resection Mesenchymal Bevacizumab 0 GSM2225567 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 283 female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 On Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.85 1 5.8 Mesenchymal Grade V Partial resection Mesenchymal 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225567 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225567 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225567 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225567_20130517_gbm-4_4_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225567_sample_table.txt norm GSM2225567_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 On Wild type 50-80 Missing <27 1 16.85 1 5.8 Mesenchymal Grade V Partial resection Mesenchymal placebo EFO EFO_0001674 2 GSM2225566 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 282 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 On Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 27.27 1 20.3 Proliferative Grade IV Complete resection Classical 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225566 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225566 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225566 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225566_20130517_gbm-4_4_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225566_sample_table.txt norm GSM2225566_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 On Wild type 50-80 Methylated >=27 1 27.27 1 20.3 Proliferative Grade IV Complete resection Classical placebo EFO EFO_0001674 2 GSM2225565 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 281 male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 25.53 0 14.5 Proneural Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225565 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225565 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225565 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225565_20130517_gbm-4_4_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225565_sample_table.txt norm GSM2225565_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 90-100 Methylated >=27 0 25.53 0 14.5 Proneural Grade IV Complete resection Proneural Bevacizumab 0 GSM2225564 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 280 male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 On Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 6.51 1 4 Unclassified Grade V Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225564 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225564 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225564 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225564_20130517_gbm-4_4_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225564_sample_table.txt norm GSM2225564_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 On Wild type 50-80 Methylated <27 1 6.51 1 4 Unclassified Grade V Partial resection Mesenchymal Bevacizumab 1 GSM2225563 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 279 male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.32 1 7.9 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225563 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225563 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225563 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225563_20130517_gbm-4_4_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225563_sample_table.txt norm GSM2225563_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 On Wild type 90-100 Non-methylated >=27 1 10.32 1 7.9 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 1 GSM2225562 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 278 female EFO http://purl.obolibrary.org/obo/PATO_0000383 79 Off Wild type 90-100 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 2.2 1 0.8 Mesenchymal Grade V Biopsy Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225562 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225562 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225562 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225562_20130517_gbm-4_4_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225562_sample_table.txt norm GSM2225562_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 79 Off Wild type 90-100 Missing <27 1 2.2 1 0.8 Mesenchymal Grade V Biopsy Classical placebo EFO EFO_0001674 1 GSM2225561 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 277 male EFO http://purl.obolibrary.org/obo/PATO_0000384 36 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.55 1 8.9 Unclassified Grade IV Partial resection Unclassified 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225561 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225561 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225561 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225561_20130517_gbm-4_4_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225561_sample_table.txt norm GSM2225561_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 36 Off Wild type 50-80 Non-methylated >=27 1 12.55 1 8.9 Unclassified Grade IV Partial resection Unclassified Bevacizumab 1 GSM2225560 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 276 male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 31.11 1 8 Unclassified Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225560 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225560 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225560 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225560_20130517_gbm-4_4_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225560_sample_table.txt norm GSM2225560_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 Off Wild type 90-100 Methylated >=27 0 31.11 1 8 Unclassified Grade IV Complete resection Classical Bevacizumab 0 GSM2225559 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 275 male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 26.94 0 16.5 Proliferative Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225559 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225559 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225559 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225559_20130517_gbm-4_4_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225559_sample_table.txt norm GSM2225559_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 Off Wild type 90-100 Methylated >=27 0 26.94 0 16.5 Proliferative Grade IV Complete resection Classical Bevacizumab 1 GSM2225558 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 274 female EFO http://purl.obolibrary.org/obo/PATO_0000383 50 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 20.04 1 11.1 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225558 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225558 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225558 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225558_20130517_gbm-4_4_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225558_sample_table.txt norm GSM2225558_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 50 Off Wild type 90-100 Missing >=27 1 20.04 1 11.1 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225557 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 273 female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 24.64 0 13 Proliferative Grade V Biopsy Neural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225557 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225557 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225557 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225557_20130517_gbm-3_3_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225557_sample_table.txt norm GSM2225557_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 On Wild type 90-100 Methylated >=27 0 24.64 0 13 Proliferative Grade V Biopsy Neural placebo EFO EFO_0001674 1 GSM2225556 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 272 male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.17 1 6.1 Proliferative Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225556 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225556 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225556 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225556_20130517_gbm-3_3_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225556_sample_table.txt norm GSM2225556_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 90-100 Non-methylated >=27 1 11.17 1 6.1 Proliferative Grade IV Partial resection Classical Bevacizumab 0 GSM2225555 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 271 female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 22.57 0 12.2 Mesenchymal Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225555 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225555 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225555 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225555_20130517_gbm-3_3_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225555_sample_table.txt norm GSM2225555_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 On Wild type 90-100 Non-methylated >=27 0 22.57 0 12.2 Mesenchymal Grade IV Complete resection Classical Bevacizumab 0 GSM2225554 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 270 female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 Off Wild type 90-100 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 22.31 1 1.3 Mesenchymal Grade V Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225554 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225554 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225554 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225554_20130517_gbm-3_3_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225554_sample_table.txt norm GSM2225554_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 Off Wild type 90-100 Missing <27 1 22.31 1 1.3 Mesenchymal Grade V Complete resection Mesenchymal Bevacizumab 0 GSM2225553 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 269 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Mutant 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 24.48 0 18.1 Unclassified NA NA Unclassified NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225553 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225553 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225553 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225553_20130517_gbm-3_3_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225553_sample_table.txt norm GSM2225553_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Mutant 90-100 Missing >=27 1 24.48 0 18.1 Unclassified NA NA Unclassified Bevacizumab NA GSM2225552 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 268 male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 26.32 0 13.7 Unclassified Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225552 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225552 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225552 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225552_20130517_gbm-3_3_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225552_sample_table.txt norm GSM2225552_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 Off Wild type 90-100 Non-methylated >=27 0 26.32 0 13.7 Unclassified Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225551 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 267 male EFO http://purl.obolibrary.org/obo/PATO_0000384 49 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 6.28 1 5.8 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225551 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225551 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225551 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225551_20130517_gbm-3_3_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225551_sample_table.txt norm GSM2225551_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 49 Off Wild type 90-100 Methylated >=27 1 6.28 1 5.8 Proneural Grade IV Partial resection Proneural Bevacizumab 1 GSM2225550 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 266 male EFO http://purl.obolibrary.org/obo/PATO_0000384 70 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 28.81 0 18.5 Proliferative Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225550 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225550 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225550 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225550_20130517_gbm-3_3_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225550_sample_table.txt norm GSM2225550_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 70 Off Wild type 90-100 Methylated >=27 0 28.81 0 18.5 Proliferative Grade IV Partial resection Classical placebo EFO EFO_0001674 0 GSM2225549 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 265 female EFO http://purl.obolibrary.org/obo/PATO_0000383 56 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.77 1 1 Proliferative Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225549 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225549 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225549 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225549_20130517_gbm-3_3_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225549_sample_table.txt norm GSM2225549_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 56 On Wild type 50-80 Non-methylated >=27 1 13.77 1 1 Proliferative Grade IV Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225548 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 264 male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.05 1 9.9 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225548 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225548 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225548 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225548_20130517_gbm-3_3_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225548_sample_table.txt norm GSM2225548_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 Off Wild type 90-100 Non-methylated >=27 1 17.05 1 9.9 Proneural Grade IV Partial resection Proneural Bevacizumab 1 GSM2225547 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 263 male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.79 1 5.6 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225547 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225547 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225547 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225547_20130517_gbm-3_3_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225547_sample_table.txt norm GSM2225547_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 Off Wild type 90-100 Missing >=27 1 16.79 1 5.6 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225546 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 262 male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9.03 1 5.8 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225546 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225546 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225546 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225546_20130517_gbm-3_3_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225546_sample_table.txt norm GSM2225546_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 Off Wild type 90-100 Missing >=27 1 9.03 1 5.8 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 0 GSM2225545 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 261 female EFO http://purl.obolibrary.org/obo/PATO_0000383 31 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.91 1 9.3 Proneural Grade III Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225545 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225545 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225545 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225545_20130517_gbm-2_2_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225545_sample_table.txt norm GSM2225545_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 31 Off Wild type 90-100 Non-methylated >=27 1 10.91 1 9.3 Proneural Grade III Complete resection Proneural placebo EFO EFO_0001674 0 GSM2225544 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 260 male EFO http://purl.obolibrary.org/obo/PATO_0000384 66 Off Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 7.72 1 2.8 Mesenchymal Grade V Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225544 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225544 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225544 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225544_20130517_gbm-2_2_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225544_sample_table.txt norm GSM2225544_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 66 Off Wild type 50-80 Non-methylated <27 1 7.72 1 2.8 Mesenchymal Grade V Partial resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225543 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 259 male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.8 1 1.6 Proliferative Grade IV Complete resection Unclassified 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225543 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225543 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225543 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225543_20130517_gbm-2_2_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225543_sample_table.txt norm GSM2225543_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 Off Wild type 50-80 Non-methylated >=27 1 15.8 1 1.6 Proliferative Grade IV Complete resection Unclassified placebo EFO EFO_0001674 2 GSM2225542 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 258 male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 20.67 1 4.7 Mesenchymal Grade III Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225542 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225542 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225542 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225542_20130517_gbm-2_2_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225542_sample_table.txt norm GSM2225542_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Non-methylated >=27 1 20.67 1 4.7 Mesenchymal Grade III Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225541 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 257 female EFO http://purl.obolibrary.org/obo/PATO_0000383 57 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 25.36 0 14.2 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225541 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225541 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225541 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225541_20130517_gbm-2_2_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225541_sample_table.txt norm GSM2225541_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 57 Off Wild type 90-100 Missing >=27 0 25.36 0 14.2 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225540 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 256 female EFO http://purl.obolibrary.org/obo/PATO_0000383 49 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9.89 1 8.3 Unclassified Grade III Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225540 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225540 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225540 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225540_20130517_gbm-2_2_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225540_sample_table.txt norm GSM2225540_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 49 Off Wild type 90-100 Missing >=27 1 9.89 1 8.3 Unclassified Grade III Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225539 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 255 female EFO http://purl.obolibrary.org/obo/PATO_0000383 28 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 32.69 0 21 Mesenchymal Grade III Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225539 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225539 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225539 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225539_20130517_gbm-2_2_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225539_sample_table.txt norm GSM2225539_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 28 Off Wild type 90-100 Non-methylated >=27 0 32.69 0 21 Mesenchymal Grade III Complete resection Mesenchymal Bevacizumab 0 GSM2225538 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 254 male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 On Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.84 1 15.5 Unclassified Grade V Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225538 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225538 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225538 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225538_20130517_gbm-2_2_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225538_sample_table.txt norm GSM2225538_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 On Wild type 50-80 Non-methylated <27 1 17.84 1 15.5 Unclassified Grade V Partial resection Mesenchymal Bevacizumab 1 GSM2225537 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 253 male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 On Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 26.25 1 4.2 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225537 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225537 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225537 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225537_20130517_gbm-2_2_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225537_sample_table.txt norm GSM2225537_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 On Wild type 90-100 Missing >=27 1 26.25 1 4.2 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225536 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 252 male EFO http://purl.obolibrary.org/obo/PATO_0000384 73 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.94 1 4.1 Unclassified Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225536 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225536 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225536 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225536_20130517_gbm-2_2_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225536_sample_table.txt norm GSM2225536_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 73 Off Wild type 90-100 Methylated >=27 1 10.94 1 4.1 Unclassified Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225535 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 251 male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.31 1 6 Unclassified Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225535 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225535 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225535 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225535_20130517_gbm-1_1_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225535_sample_table.txt norm GSM2225535_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 90-100 Non-methylated >=27 1 13.31 1 6 Unclassified Grade IV Complete resection Proneural Bevacizumab 0 GSM2225534 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 250 female EFO http://purl.obolibrary.org/obo/PATO_0000383 45 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.23 1 8.3 Mesenchymal Grade III Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225534 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225534 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225534 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225534_20130517_gbm-1_1_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225534_sample_table.txt norm GSM2225534_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 45 On Wild type 90-100 Non-methylated >=27 1 14.23 1 8.3 Mesenchymal Grade III Partial resection Mesenchymal Bevacizumab 0 GSM2225533 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 249 female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 On Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 26.25 1 2.1 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225533 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225533 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225533 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225533_20130517_gbm-1_1_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225533_sample_table.txt norm GSM2225533_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 On Wild type 90-100 Missing >=27 0 26.25 1 2.1 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225532 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 248 male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 27.43 1 11.7 Proliferative Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225532 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225532 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225532 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225532_20130517_gbm-1_1_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225532_sample_table.txt norm GSM2225532_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 Off Wild type 90-100 Methylated >=27 1 27.43 1 11.7 Proliferative Grade IV Partial resection Classical placebo EFO EFO_0001674 0 GSM2225531 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 247 male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 On Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9 1 4.1 Mesenchymal Grade V Partial resection Mesenchymal 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225531 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225531 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225531 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225531_20130517_gbm-1_1_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225531_sample_table.txt norm GSM2225531_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 On Wild type 50-80 Non-methylated <27 1 9 1 4.1 Mesenchymal Grade V Partial resection Mesenchymal Bevacizumab 2 GSM2225530 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 246 female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.11 1 10 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225530 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225530 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225530 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225530_20130517_gbm-1_1_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225530_sample_table.txt norm GSM2225530_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 On Wild type 90-100 Non-methylated >=27 1 15.11 1 10 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225529 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 245 male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9.95 1 8.7 Unclassified Grade IV Partial resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225529 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225529 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225529 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225529_20130517_gbm-1_1_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225529_sample_table.txt norm GSM2225529_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 Off Wild type 90-100 Missing >=27 1 9.95 1 8.7 Unclassified Grade IV Partial resection Unclassified placebo EFO EFO_0001674 0 GSM2225528 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 244 female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.59 1 11.8 Proneural Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225528 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225528 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225528 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225528_20130517_gbm-1_1_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225528_sample_table.txt norm GSM2225528_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 On Wild type 50-80 Non-methylated >=27 1 14.59 1 11.8 Proneural Grade IV Complete resection Classical placebo EFO EFO_0001674 1 GSM2225527 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 243 female EFO http://purl.obolibrary.org/obo/PATO_0000383 51 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 24.05 1 5.8 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225527 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225527 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225527 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225527_20130517_gbm-1_1_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225527_sample_table.txt norm GSM2225527_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 51 On Wild type 90-100 Non-methylated >=27 1 24.05 1 5.8 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225526 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 242 female EFO http://purl.obolibrary.org/obo/PATO_0000383 56 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 21.62 1 14.6 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225526 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225526 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225526 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225526_20130517_gbm-1_1_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225526_sample_table.txt norm GSM2225526_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 56 On Wild type 90-100 Methylated >=27 1 21.62 1 14.6 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225525 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 241 male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 1.41 1 1.4 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225525 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225525 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225525 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225525_20130517_gbm-1_1_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225525_sample_table.txt norm GSM2225525_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 On Wild type 90-100 Methylated >=27 1 1.41 1 1.4 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225524 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 240 male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 26.61 1 4.3 Unclassified Grade IV Partial resection Unclassified 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225524 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225524 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225524 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225524_20130516_gbm-2_2_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225524_sample_table.txt norm GSM2225524_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Non-methylated >=27 0 26.61 1 4.3 Unclassified Grade IV Partial resection Unclassified Bevacizumab 1 GSM2225523 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 239 male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 On Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 3.78 1 2.2 Mesenchymal Grade V Biopsy Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225523 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225523 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225523 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225523_20130516_gbm-2_2_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225523_sample_table.txt norm GSM2225523_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 On Wild type 90-100 Missing >=27 1 3.78 1 2.2 Mesenchymal Grade V Biopsy Classical placebo EFO EFO_0001674 0 GSM2225522 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 238 female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 19.35 1 13.1 Proneural Grade IV Complete resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225522 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225522 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225522 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225522_20130516_gbm-2_2_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225522_sample_table.txt norm GSM2225522_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 Off Wild type 90-100 Non-methylated >=27 1 19.35 1 13.1 Proneural Grade IV Complete resection Proneural placebo EFO EFO_0001674 1 GSM2225521 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 237 male EFO http://purl.obolibrary.org/obo/PATO_0000384 45 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 30.46 0 18.5 Mesenchymal Grade III Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225521 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225521 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225521 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225521_20130516_gbm-2_2_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225521_sample_table.txt norm GSM2225521_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 45 Off Wild type 90-100 Methylated >=27 0 30.46 0 18.5 Mesenchymal Grade III Complete resection Classical Bevacizumab 0 GSM2225520 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 236 male EFO http://purl.obolibrary.org/obo/PATO_0000384 39 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 3.45 1 3.4 Proliferative Grade III Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225520 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225520 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225520 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225520_20130516_gbm-2_2_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225520_sample_table.txt norm GSM2225520_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 39 On Wild type 90-100 Non-methylated >=27 1 3.45 1 3.4 Proliferative Grade III Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225519 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 235 female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 On Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.87 1 4.7 Proneural Grade V Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225519 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225519 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225519 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225519_20130516_gbm-2_2_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225519_sample_table.txt norm GSM2225519_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 On Wild type 50-80 Missing <27 1 8.87 1 4.7 Proneural Grade V Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225518 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 234 male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.74 1 6 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225518 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225518 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225518 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225518_20130516_gbm-2_2_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225518_sample_table.txt norm GSM2225518_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 Off Wild type 50-80 Non-methylated >=27 1 17.74 1 6 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225517 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 233 male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 20.27 1 11.8 Proliferative Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225517 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225517 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225517 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225517_20130516_gbm-2_2_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225517_sample_table.txt norm GSM2225517_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 50-80 Non-methylated >=27 1 20.27 1 11.8 Proliferative Grade IV Complete resection Classical Bevacizumab 1 GSM2225516 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 232 male EFO http://purl.obolibrary.org/obo/PATO_0000384 45 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 24.28 1 10.9 Unclassified Grade III Complete resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225516 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225516 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225516 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225516_20130516_gbm-2_2_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225516_sample_table.txt norm GSM2225516_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 45 Off Wild type 90-100 Non-methylated >=27 1 24.28 1 10.9 Unclassified Grade III Complete resection Unclassified Bevacizumab 0 GSM2225515 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 231 female EFO http://purl.obolibrary.org/obo/PATO_0000383 44 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 24.21 0 13.4 Mesenchymal Grade III Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225515 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225515 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225515 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225515_20130516_gbm-2_2_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225515_sample_table.txt norm GSM2225515_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 44 Off Wild type 90-100 Methylated >=27 0 24.21 0 13.4 Mesenchymal Grade III Complete resection Mesenchymal Bevacizumab 0 GSM2225514 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 230 female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 30.59 0 20.5 Mesenchymal Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225514 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225514 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225514 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225514_20130516_gbm-1_1_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225514_sample_table.txt norm GSM2225514_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 Off Wild type 90-100 Methylated >=27 0 30.59 0 20.5 Mesenchymal Grade IV Complete resection Classical Bevacizumab 1 GSM2225513 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 229 female EFO http://purl.obolibrary.org/obo/PATO_0000383 46 Off Wild type 90-100 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 23.16 0 15.2 Proliferative Grade III Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225513 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225513 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225513 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225513_20130516_gbm-1_1_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225513_sample_table.txt norm GSM2225513_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 46 Off Wild type 90-100 Missing <27 1 23.16 0 15.2 Proliferative Grade III Complete resection Classical Bevacizumab 0 GSM2225512 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 228 male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 6.93 1 4.6 Unclassified Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225512 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225512 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225512 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225512_20130516_gbm-1_1_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225512_sample_table.txt norm GSM2225512_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 90-100 Non-methylated >=27 1 6.93 1 4.6 Unclassified Grade IV Partial resection Classical Bevacizumab 0 GSM2225511 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 227 male EFO http://purl.obolibrary.org/obo/PATO_0000384 35 Off Mutant 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 26.32 0 14.3 Proneural NA NA Proneural NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225511 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225511 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225511 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225511_20130516_gbm-1_1_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225511_sample_table.txt norm GSM2225511_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 35 Off Mutant 90-100 Methylated >=27 0 26.32 0 14.3 Proneural NA NA Proneural Bevacizumab NA GSM2225510 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 226 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 On Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.38 1 10.5 Proneural Grade IV Partial resection Proneural 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225510 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225510 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225510 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225510_20130516_gbm-1_1_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225510_sample_table.txt norm GSM2225510_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 On Wild type 50-80 Methylated >=27 1 15.38 1 10.5 Proneural Grade IV Partial resection Proneural Bevacizumab 2 GSM2225509 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 225 male EFO http://purl.obolibrary.org/obo/PATO_0000384 35 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 25.17 1 11.3 Mesenchymal Grade III Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225509 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225509 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225509 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225509_20130516_gbm-1_1_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225509_sample_table.txt norm GSM2225509_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 35 Off Wild type 90-100 Methylated >=27 0 25.17 1 11.3 Mesenchymal Grade III Complete resection Mesenchymal Bevacizumab 0 GSM2225508 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 224 female EFO http://purl.obolibrary.org/obo/PATO_0000383 60 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 6.01 1 2.8 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225508 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225508 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225508 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225508_20130516_gbm-1_1_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225508_sample_table.txt norm GSM2225508_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 60 On Wild type 50-80 Non-methylated >=27 1 6.01 1 2.8 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225507 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 223 female EFO http://purl.obolibrary.org/obo/PATO_0000383 49 Off Wild type 90-100 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.84 1 16.3 Proliferative Grade III Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225507 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225507 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225507 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225507_20130516_gbm-1_1_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225507_sample_table.txt norm GSM2225507_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 49 Off Wild type 90-100 Methylated <27 1 17.84 1 16.3 Proliferative Grade III Partial resection Classical placebo EFO EFO_0001674 0 GSM2225506 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 222 male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 22.83 1 8.9 Mesenchymal Grade V Complete resection Unclassified 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225506 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225506 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225506 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225506_20130516_gbm-1_1_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225506_sample_table.txt norm GSM2225506_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 50-80 Methylated <27 0 22.83 1 8.9 Mesenchymal Grade V Complete resection Unclassified placebo EFO EFO_0001674 2 GSM2225505 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 221 male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 On Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 26.05 1 8.4 Proliferative Grade V Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225505 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225505 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225505 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225505_20130516_gbm-1_1_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225505_sample_table.txt norm GSM2225505_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 On Wild type 50-80 Methylated <27 1 26.05 1 8.4 Proliferative Grade V Partial resection Classical Bevacizumab 1 GSM2225504 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 220 male EFO http://purl.obolibrary.org/obo/PATO_0000384 73 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.01 1 8 Proliferative Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225504 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225504 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225504 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225504_20130515_gbm2_2_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225504_sample_table.txt norm GSM2225504_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 73 Off Wild type 90-100 Non-methylated >=27 1 13.01 1 8 Proliferative Grade IV Partial resection Classical placebo EFO EFO_0001674 0 GSM2225503 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 219 female EFO http://purl.obolibrary.org/obo/PATO_0000383 52 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 26.15 1 19.3 Proneural Grade IV Complete resection Neural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225503 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225503 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225503 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225503_20130515_gbm2_2_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225503_sample_table.txt norm GSM2225503_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 52 Off Wild type 90-100 Methylated >=27 1 26.15 1 19.3 Proneural Grade IV Complete resection Neural Bevacizumab 0 GSM2225502 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 218 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9.92 1 4.2 Proliferative Grade IV Complete resection Neural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225502 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225502 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225502 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225502_20130515_gbm2_2_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225502_sample_table.txt norm GSM2225502_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 90-100 Non-methylated >=27 1 9.92 1 4.2 Proliferative Grade IV Complete resection Neural placebo EFO EFO_0001674 0 GSM2225501 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 217 male EFO http://purl.obolibrary.org/obo/PATO_0000384 62 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 6.05 1 4.1 Mesenchymal Grade V Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225501 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225501 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225501 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225501_20130515_gbm2_2_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225501_sample_table.txt norm GSM2225501_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 62 Off Wild type 90-100 Non-methylated <27 1 6.05 1 4.1 Mesenchymal Grade V Complete resection Mesenchymal Bevacizumab 0 GSM2225500 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 216 female EFO http://purl.obolibrary.org/obo/PATO_0000383 35 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 27.83 0 17.5 Proliferative Grade III Biopsy Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225500 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225500 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225500 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225500_20130515_gbm2_2_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225500_sample_table.txt norm GSM2225500_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 35 On Wild type 90-100 Non-methylated >=27 0 27.83 0 17.5 Proliferative Grade III Biopsy Classical placebo EFO EFO_0001674 0 GSM2225499 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 215 female EFO http://purl.obolibrary.org/obo/PATO_0000383 64 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 10.18 1 2.2 Mesenchymal Grade V Partial resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225499 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225499 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225499 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225499_20130515_gbm2_2_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225499_sample_table.txt norm GSM2225499_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 64 Off Wild type 90-100 Non-methylated <27 0 10.18 1 2.2 Mesenchymal Grade V Partial resection Unclassified placebo EFO EFO_0001674 0 GSM2225498 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 214 male EFO http://purl.obolibrary.org/obo/PATO_0000384 42 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 23.92 1 13.9 Proliferative Grade III Partial resection Neural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225498 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225498 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225498 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225498_20130515_gbm2_2_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225498_sample_table.txt norm GSM2225498_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 42 Off Wild type 90-100 Non-methylated >=27 0 23.92 1 13.9 Proliferative Grade III Partial resection Neural Bevacizumab 0 GSM2225497 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 213 female EFO http://purl.obolibrary.org/obo/PATO_0000383 55 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.18 1 7.8 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225497 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225497 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225497 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225497_20130515_gbm2_2_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225497_sample_table.txt norm GSM2225497_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 55 Off Wild type 90-100 Missing >=27 1 8.18 1 7.8 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225496 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 212 female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 24.15 0 12.1 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225496 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225496 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225496 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225496_20130515_gbm2_2_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225496_sample_table.txt norm GSM2225496_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 On Wild type 90-100 Methylated >=27 0 24.15 0 12.1 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225495 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 211 female EFO http://purl.obolibrary.org/obo/PATO_0000383 21 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 7.72 1 5.6 Proneural Grade IV Complete resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225495 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225495 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225495 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225495_20130515_gbm2_2_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225495_sample_table.txt norm GSM2225495_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 21 On Wild type 90-100 Non-methylated >=27 1 7.72 1 5.6 Proneural Grade IV Complete resection Proneural placebo EFO EFO_0001674 1 GSM2225494 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 210 male EFO http://purl.obolibrary.org/obo/PATO_0000384 48 On Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.45 1 10 Mesenchymal Grade III Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225494 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225494 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225494 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225494_20130515_gbm2_2_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225494_sample_table.txt norm GSM2225494_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 48 On Wild type 90-100 Missing >=27 1 17.45 1 10 Mesenchymal Grade III Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225493 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 209 male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.95 1 10 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225493 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225493 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225493 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225493_20130515_gbm2_2_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225493_sample_table.txt norm GSM2225493_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 Off Wild type 90-100 Non-methylated >=27 1 14.95 1 10 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225492 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 208 male EFO http://purl.obolibrary.org/obo/PATO_0000384 76 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.69 1 8.4 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225492 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225492 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225492 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225492_20130515_gbm-1_1_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225492_sample_table.txt norm GSM2225492_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 76 On Wild type 50-80 Non-methylated >=27 1 16.69 1 8.4 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225491 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 207 female EFO http://purl.obolibrary.org/obo/PATO_0000383 70 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.18 1 4 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225491 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225491 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225491 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225491_20130515_gbm-1_1_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225491_sample_table.txt norm GSM2225491_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 70 On Wild type 90-100 Non-methylated >=27 1 8.18 1 4 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225490 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 206 female EFO http://purl.obolibrary.org/obo/PATO_0000383 34 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 28.12 0 16.6 Proliferative Grade III Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225490 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225490 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225490 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225490_20130515_gbm-1_1_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225490_sample_table.txt norm GSM2225490_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 34 Off Wild type 90-100 Non-methylated >=27 0 28.12 0 16.6 Proliferative Grade III Complete resection Mesenchymal Bevacizumab 0 GSM2225489 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 205 male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 On Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 3.06 1 3.1 Mesenchymal Grade IV Partial resection Mesenchymal 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225489 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225489 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225489 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225489_20130515_gbm-1_1_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225489_sample_table.txt norm GSM2225489_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 On Wild type 50-80 Missing >=27 1 3.06 1 3.1 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 2 GSM2225488 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 204 female EFO http://purl.obolibrary.org/obo/PATO_0000383 56 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.07 1 4.3 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225488 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225488 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225488 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225488_20130515_gbm-1_1_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225488_sample_table.txt norm GSM2225488_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 56 Off Wild type 90-100 Methylated >=27 1 11.07 1 4.3 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225487 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 203 female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.25 1 9.5 Proneural Grade V Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225487 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225487 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225487 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225487_20130515_gbm-1_1_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225487_sample_table.txt norm GSM2225487_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 Off Wild type 90-100 Non-methylated <27 1 12.25 1 9.5 Proneural Grade V Complete resection Proneural Bevacizumab 0 GSM2225486 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 202 female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.54 1 11.3 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225486 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225486 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225486 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225486_20130515_gbm-1_1_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225486_sample_table.txt norm GSM2225486_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 Off Wild type 90-100 Non-methylated >=27 1 15.54 1 11.3 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225485 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 201 female EFO http://purl.obolibrary.org/obo/PATO_0000383 73 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.12 1 11.1 Proliferative Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225485 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225485 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225485 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225485_20130515_gbm-1_1_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225485_sample_table.txt norm GSM2225485_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 73 Off Wild type 90-100 Methylated >=27 1 12.12 1 11.1 Proliferative Grade IV Complete resection Classical Bevacizumab 0 GSM2225484 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 200 female EFO http://purl.obolibrary.org/obo/PATO_0000383 64 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 28.42 1 9.9 Mesenchymal Grade V Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225484 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225484 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225484 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225484_20130515_gbm-1_1_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225484_sample_table.txt norm GSM2225484_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 64 Off Wild type 90-100 Non-methylated <27 1 28.42 1 9.9 Mesenchymal Grade V Partial resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225483 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 199 male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.94 1 2.3 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225483 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225483 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225483 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225483_20130515_gbm-1_1_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225483_sample_table.txt norm GSM2225483_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 90-100 Non-methylated >=27 1 10.94 1 2.3 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225482 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 198 male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 5.03 1 2.3 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225482 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225482 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225482 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225482_20130515_gbm-1_1_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225482_sample_table.txt norm GSM2225482_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 Off Wild type 90-100 Non-methylated >=27 1 5.03 1 2.3 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225481 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 197 male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.52 1 6.2 Mesenchymal Grade V Partial resection Neural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225481 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225481 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225481 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225481_20130514_gbm-4_4_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225481_sample_table.txt norm GSM2225481_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 Off Wild type 90-100 Non-methylated <27 1 14.52 1 6.2 Mesenchymal Grade V Partial resection Neural Bevacizumab 0 GSM2225480 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 196 male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 4.5 1 4.5 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225480 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225480 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225480 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225480_20130514_gbm-4_4_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225480_sample_table.txt norm GSM2225480_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 On Wild type 90-100 Non-methylated >=27 1 4.5 1 4.5 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 0 GSM2225479 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 195 male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 On Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 1.94 0 0 Mesenchymal Grade V Complete resection Classical 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225479 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225479 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225479 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225479_20130514_gbm-4_4_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225479_sample_table.txt norm GSM2225479_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 On Wild type 50-80 Methylated <27 0 1.94 0 0 Mesenchymal Grade V Complete resection Classical placebo EFO EFO_0001674 2 GSM2225478 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 194 male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 28.55 1 18.3 Proliferative Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225478 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225478 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225478 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225478_20130514_gbm-4_4_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225478_sample_table.txt norm GSM2225478_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 Off Wild type 90-100 Non-methylated >=27 0 28.55 1 18.3 Proliferative Grade IV Complete resection Proneural Bevacizumab 0 GSM2225477 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 193 male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.65 1 13.6 Proliferative Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225477 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225477 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225477 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225477_20130514_gbm-4_4_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225477_sample_table.txt norm GSM2225477_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 90-100 Non-methylated >=27 1 14.65 1 13.6 Proliferative Grade IV Complete resection Classical Bevacizumab 0 GSM2225476 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 192 male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 3.25 0 2.3 Proneural Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225476 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225476 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225476 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225476_20130514_gbm-4_4_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225476_sample_table.txt norm GSM2225476_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 On Wild type 90-100 Methylated >=27 0 3.25 0 2.3 Proneural Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225475 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 191 male EFO http://purl.obolibrary.org/obo/PATO_0000384 69 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 6.34 1 3.7 Proneural Grade IV Partial resection Proneural 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225475 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225475 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225475 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225475_20130514_gbm-4_4_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225475_sample_table.txt norm GSM2225475_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 69 On Wild type 50-80 Non-methylated >=27 1 6.34 1 3.7 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 2 GSM2225474 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 190 female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 3.32 1 3.3 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225474 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225474 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225474 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225474_20130514_gbm-4_4_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225474_sample_table.txt norm GSM2225474_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 On Wild type 90-100 Non-methylated >=27 1 3.32 1 3.3 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 1 GSM2225473 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 189 male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 21.95 1 7.6 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225473 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225473 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225473 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225473_20130514_gbm-4_4_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225473_sample_table.txt norm GSM2225473_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 Off Wild type 50-80 Non-methylated >=27 1 21.95 1 7.6 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225472 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 188 male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9.76 1 7.2 Proneural Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225472 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225472 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225472 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225472_20130514_gbm-4_4_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225472_sample_table.txt norm GSM2225472_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 Off Wild type 90-100 Methylated >=27 1 9.76 1 7.2 Proneural Grade IV Complete resection Classical placebo EFO EFO_0001674 0 GSM2225471 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 187 male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 24.71 0 12.7 Mesenchymal Grade IV Partial resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225471 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225471 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225471 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225471_20130514_gbm-4_4_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225471_sample_table.txt norm GSM2225471_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 On Wild type 90-100 Methylated >=27 0 24.71 0 12.7 Mesenchymal Grade IV Partial resection Unclassified placebo EFO EFO_0001674 0 GSM2225470 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 186 male EFO http://purl.obolibrary.org/obo/PATO_0000384 38 On Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 23.13 1 12.9 Unclassified Grade III Complete resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225470 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225470 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225470 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225470_20130514_gbm-4_4_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225470_sample_table.txt norm GSM2225470_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 38 On Wild type 90-100 Missing >=27 1 23.13 1 12.9 Unclassified Grade III Complete resection Unclassified Bevacizumab 0 GSM2225469 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 185 male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.19 1 2.4 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225469 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225469 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225469 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225469_20130514_gbm-3_3_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225469_sample_table.txt norm GSM2225469_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 Off Wild type 90-100 Non-methylated >=27 1 12.19 1 2.4 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225468 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 184 male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 20.83 1 12.1 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225468 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225468 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225468 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225468_20130514_gbm-3_3_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225468_sample_table.txt norm GSM2225468_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 Off Wild type 90-100 Non-methylated >=27 1 20.83 1 12.1 Proneural Grade IV Partial resection Proneural Bevacizumab 0 GSM2225467 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 183 female EFO http://purl.obolibrary.org/obo/PATO_0000383 49 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 28.09 0 16 Proneural Grade III Complete resection Neural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225467 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225467 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225467 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225467_20130514_gbm-3_3_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225467_sample_table.txt norm GSM2225467_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 49 On Wild type 90-100 Methylated >=27 0 28.09 0 16 Proneural Grade III Complete resection Neural Bevacizumab 0 GSM2225466 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 182 male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 24.31 0 12.9 Proneural Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225466 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225466 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225466 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225466_20130514_gbm-3_3_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225466_sample_table.txt norm GSM2225466_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 90-100 Non-methylated >=27 0 24.31 0 12.9 Proneural Grade IV Complete resection Proneural Bevacizumab 0 GSM2225465 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 181 female EFO http://purl.obolibrary.org/obo/PATO_0000383 72 On Wild type 90-100 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 5.95 0 5.9 Proneural Grade V Biopsy Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225465 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225465 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225465 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225465_20130514_gbm-3_3_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225465_sample_table.txt norm GSM2225465_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 72 On Wild type 90-100 Missing <27 0 5.95 0 5.9 Proneural Grade V Biopsy Mesenchymal placebo EFO EFO_0001674 0 GSM2225464 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 180 female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 23.89 0 14.1 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225464 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225464 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225464 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225464_20130514_gbm-3_3_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225464_sample_table.txt norm GSM2225464_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 Off Wild type 90-100 Non-methylated >=27 0 23.89 0 14.1 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225463 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 179 male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 23.23 1 4.1 Mesenchymal Grade V Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225463 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225463 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225463 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225463_20130514_gbm-3_3_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225463_sample_table.txt norm GSM2225463_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 Off Wild type 90-100 Non-methylated <27 0 23.23 1 4.1 Mesenchymal Grade V Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225462 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 178 female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.66 1 1.9 Mesenchymal Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225462 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225462 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225462 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225462_20130514_gbm-3_3_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225462_sample_table.txt norm GSM2225462_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 On Wild type 50-80 Non-methylated >=27 1 11.66 1 1.9 Mesenchymal Grade IV Complete resection Classical placebo EFO EFO_0001674 1 GSM2225461 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 177 female EFO http://purl.obolibrary.org/obo/PATO_0000383 70 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 22.9 0 12.9 Mesenchymal Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225461 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225461 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225461 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225461_20130514_gbm-3_3_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225461_sample_table.txt norm GSM2225461_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 70 Off Wild type 90-100 Missing >=27 0 22.9 0 12.9 Mesenchymal Grade IV Partial resection Classical Bevacizumab 0 GSM2225460 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 176 female EFO http://purl.obolibrary.org/obo/PATO_0000383 71 On Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.12 1 15 Proneural Grade V Biopsy Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225460 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225460 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225460 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225460_20130514_gbm-3_3_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225460_sample_table.txt norm GSM2225460_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 71 On Wild type 50-80 Missing <27 1 17.12 1 15 Proneural Grade V Biopsy Proneural Bevacizumab 1 GSM2225459 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 175 female EFO http://purl.obolibrary.org/obo/PATO_0000383 53 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.32 1 4.2 Unclassified Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225459 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225459 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225459 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225459_20130514_gbm-2_2_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225459_sample_table.txt norm GSM2225459_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 53 Off Wild type 90-100 Non-methylated >=27 1 10.32 1 4.2 Unclassified Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225458 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 174 male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.97 1 6.2 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225458 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225458 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225458 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225458_20130514_gbm-2_2_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225458_sample_table.txt norm GSM2225458_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 Off Wild type 50-80 Non-methylated >=27 1 10.97 1 6.2 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225457 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 173 male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.01 1 7.4 Unclassified Grade IV Partial resection Unclassified 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225457 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225457 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225457 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225457_20130514_gbm-2_2_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225457_sample_table.txt norm GSM2225457_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 50-80 Methylated <27 1 13.01 1 7.4 Unclassified Grade IV Partial resection Unclassified placebo EFO EFO_0001674 2 GSM2225456 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 172 male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 33.35 1 22.5 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225456 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225456 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225456 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225456_20130514_gbm-2_2_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225456_sample_table.txt norm GSM2225456_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 50-80 Methylated >=27 0 33.35 1 22.5 Proneural Grade IV Partial resection Proneural Bevacizumab 1 GSM2225455 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 171 female EFO http://purl.obolibrary.org/obo/PATO_0000383 41 Off Mutant 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 25.79 0 14.4 Proneural NA NA Proneural NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225455 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225455 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225455 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225455_20130514_gbm-2_2_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225455_sample_table.txt norm GSM2225455_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 41 Off Mutant 90-100 Methylated >=27 0 25.79 0 14.4 Proneural NA NA Proneural placebo EFO EFO_0001674 NA GSM2225454 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 170 male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.28 1 12.9 Mesenchymal Grade IV Partial resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225454 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225454 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225454 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225454_20130514_gbm-2_2_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225454_sample_table.txt norm GSM2225454_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Non-methylated >=27 1 17.28 1 12.9 Mesenchymal Grade IV Partial resection Unclassified Bevacizumab 0 GSM2225453 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 169 male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 34.89 1 18.1 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225453 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225453 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225453 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225453_20130514_gbm-2_2_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225453_sample_table.txt norm GSM2225453_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 On Wild type 90-100 Methylated >=27 1 34.89 1 18.1 Proneural Grade IV Partial resection Proneural Bevacizumab 0 GSM2225452 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 168 female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 On Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 18.23 1 8.8 Proneural Grade V Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225452 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225452 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225452 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225452_20130514_gbm-2_2_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225452_sample_table.txt norm GSM2225452_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 On Wild type 90-100 Non-methylated <27 1 18.23 1 8.8 Proneural Grade V Partial resection Proneural Bevacizumab 0 GSM2225451 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 167 male EFO http://purl.obolibrary.org/obo/PATO_0000384 77 On Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.29 1 2.6 Mesenchymal Grade IV Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225451 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225451 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225451 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225451_20130514_gbm-2_2_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225451_sample_table.txt norm GSM2225451_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 77 On Wild type 50-80 Methylated >=27 1 12.29 1 2.6 Mesenchymal Grade IV Partial resection Classical Bevacizumab 1 GSM2225450 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 166 male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 18.5 1 11.5 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225450 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225450 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225450 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225450_20130514_gbm-2_2_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225450_sample_table.txt norm GSM2225450_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 Off Wild type 90-100 Non-methylated >=27 1 18.5 1 11.5 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225449 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 165 female EFO http://purl.obolibrary.org/obo/PATO_0000383 46 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.67 1 13.6 Proliferative Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225449 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225449 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225449 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225449_20130514_gbm-2_2_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225449_sample_table.txt norm GSM2225449_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 46 Off Wild type 90-100 Non-methylated <27 1 15.67 1 13.6 Proliferative Grade IV Complete resection Classical Bevacizumab 1 GSM2225448 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 164 male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 On Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.31 1 4 Proneural Grade V Partial resection Proneural 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225448 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225448 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225448 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225448_20130514_gbm-2_2_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225448_sample_table.txt norm GSM2225448_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 On Wild type 50-80 Missing <27 1 8.31 1 4 Proneural Grade V Partial resection Proneural Bevacizumab 2 GSM2225447 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 163 male EFO http://purl.obolibrary.org/obo/PATO_0000384 48 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 20.86 1 6.2 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225447 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225447 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225447 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225447_20130514_gbm-1_1_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225447_sample_table.txt norm GSM2225447_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 48 Off Wild type 90-100 Non-methylated >=27 1 20.86 1 6.2 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225446 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 162 male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 On Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 2.43 1 2.4 Unclassified Grade V Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225446 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225446 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225446 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225446_20130514_gbm-1_1_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225446_sample_table.txt norm GSM2225446_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 On Wild type 50-80 Missing <27 1 2.43 1 2.4 Unclassified Grade V Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225445 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 161 female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 27.07 1 14.9 Mesenchymal Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225445 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225445 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225445 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225445_20130514_gbm-1_1_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225445_sample_table.txt norm GSM2225445_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 Off Wild type 90-100 Methylated >=27 1 27.07 1 14.9 Mesenchymal Grade IV Complete resection Classical Bevacizumab 0 GSM2225444 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 160 male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 23.2 1 9.8 Mesenchymal Grade III Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225444 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225444 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225444 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225444_20130514_gbm-1_1_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225444_sample_table.txt norm GSM2225444_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Non-methylated >=27 1 23.2 1 9.8 Mesenchymal Grade III Complete resection Classical Bevacizumab 0 GSM2225443 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 159 female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 22.24 1 9.9 Proliferative Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225443 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225443 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225443 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225443_20130514_gbm-1_1_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225443_sample_table.txt norm GSM2225443_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 Off Wild type 90-100 Non-methylated >=27 1 22.24 1 9.9 Proliferative Grade IV Partial resection Classical placebo EFO EFO_0001674 0 GSM2225442 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 158 female EFO http://purl.obolibrary.org/obo/PATO_0000383 53 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 33.12 0 21.7 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225442 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225442 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225442 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225442_20130514_gbm-1_1_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225442_sample_table.txt norm GSM2225442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 53 Off Wild type 90-100 Methylated >=27 0 33.12 0 21.7 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225441 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 157 male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 Off Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 23.62 1 7.9 Mesenchymal Grade V Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225441 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225441 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225441 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225441_20130514_gbm-1_1_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225441_sample_table.txt norm GSM2225441_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 Off Wild type 50-80 Methylated <27 0 23.62 1 7.9 Mesenchymal Grade V Partial resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225440 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 156 male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 On Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.98 1 5.9 Proliferative Grade V Biopsy Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225440 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225440 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225440 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225440_20130514_gbm-1_1_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225440_sample_table.txt norm GSM2225440_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 On Wild type 50-80 Missing >=27 1 12.98 1 5.9 Proliferative Grade V Biopsy Classical Bevacizumab 1 GSM2225439 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 155 male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 On Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 7.36 1 7.4 Mesenchymal Grade V Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225439 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225439 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225439 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225439_20130514_gbm-1_1_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225439_sample_table.txt norm GSM2225439_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 On Wild type 90-100 Non-methylated <27 1 7.36 1 7.4 Mesenchymal Grade V Complete resection Mesenchymal Bevacizumab 1 GSM2225438 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 154 male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.18 1 4.3 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225438 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225438 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225438 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225438_20130514_gbm-1_1_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225438_sample_table.txt norm GSM2225438_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 On Wild type 50-80 Non-methylated >=27 1 8.18 1 4.3 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225437 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 153 male EFO http://purl.obolibrary.org/obo/PATO_0000384 34 On Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 20.53 1 12.2 Unclassified Grade IV Partial resection Mesenchymal 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225437 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225437 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225437 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225437_20130514_gbm-1_1_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225437_sample_table.txt norm GSM2225437_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 34 On Wild type 50-80 Methylated >=27 1 20.53 1 12.2 Unclassified Grade IV Partial resection Mesenchymal Bevacizumab 2 GSM2225436 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 152 male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 21.06 1 18.2 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225436 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225436 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225436 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225436_20130514_gbm-1_1_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225436_sample_table.txt norm GSM2225436_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 50-80 Non-methylated >=27 1 21.06 1 18.2 Proneural Grade IV Partial resection Proneural Bevacizumab 1 GSM2225435 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 151 male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.33 1 11.2 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225435 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225435 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225435 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225435_20130514_gbm-r_2R_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225435_sample_table.txt norm GSM2225435_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 On Wild type 90-100 Non-methylated >=27 1 16.33 1 11.2 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225434 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 150 female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 2.79 1 2.8 Proneural Grade IV Complete resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225434 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225434 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225434 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225434_20130514_gbm-r_2R_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225434_sample_table.txt norm GSM2225434_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 On Wild type 50-80 Non-methylated >=27 1 2.79 1 2.8 Proneural Grade IV Complete resection Proneural placebo EFO EFO_0001674 1 GSM2225433 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 149 female EFO http://purl.obolibrary.org/obo/PATO_0000383 57 On Wild type 90-100 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 34.5 1 22.1 Proliferative Grade V Biopsy Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225433 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225433 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225433 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225433_20130514_gbm-r_2R_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225433_sample_table.txt norm GSM2225433_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 57 On Wild type 90-100 Missing <27 1 34.5 1 22.1 Proliferative Grade V Biopsy Classical Bevacizumab 1 GSM2225432 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 148 female EFO http://purl.obolibrary.org/obo/PATO_0000383 21 On Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.77 1 12.1 Proneural Grade III Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225432 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225432 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225432 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225432_20130514_gbm-r_2R_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225432_sample_table.txt norm GSM2225432_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 21 On Wild type 90-100 Missing >=27 1 13.77 1 12.1 Proneural Grade III Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225431 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 147 female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 NA Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.39 1 13.9 Proliferative Grade IV Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225431 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225431 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225431 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225431_20130514_gbm-r_2R_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225431_sample_table.txt norm GSM2225431_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 NA Wild type 90-100 Methylated >=27 1 16.39 1 13.9 Proliferative Grade IV Partial resection Classical placebo EFO EFO_0001674 1 GSM2225430 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 146 female EFO http://purl.obolibrary.org/obo/PATO_0000383 53 On Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 29.8 1 11 Mesenchymal Grade V Partial resection Neural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225430 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225430 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225430 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225430_20130514_gbm-r_2R_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225430_sample_table.txt norm GSM2225430_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 53 On Wild type 90-100 Non-methylated <27 1 29.8 1 11 Mesenchymal Grade V Partial resection Neural Bevacizumab 0 GSM2225429 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 145 male EFO http://purl.obolibrary.org/obo/PATO_0000384 62 On Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.94 1 5.3 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225429 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225429 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225429 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225429_20130514_gbm-r_2R_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225429_sample_table.txt norm GSM2225429_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 62 On Wild type 90-100 Missing >=27 1 12.94 1 5.3 Proneural Grade IV Partial resection Proneural Bevacizumab 1 GSM2225428 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 144 female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 25.46 1 2.1 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225428 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225428 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225428 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225428_20130514_gbm-r_2R_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225428_sample_table.txt norm GSM2225428_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 On Wild type 50-80 Non-methylated >=27 1 25.46 1 2.1 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225427 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 143 male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 23.69 1 3.1 Proliferative Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225427 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225427 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225427 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225427_20130514_gbm-r_2R_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225427_sample_table.txt norm GSM2225427_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 On Wild type 50-80 Non-methylated >=27 1 23.69 1 3.1 Proliferative Grade IV Complete resection Classical placebo EFO EFO_0001674 1 GSM2225426 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 142 female EFO http://purl.obolibrary.org/obo/PATO_0000383 61 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 3.75 1 2.1 Proneural Grade IV Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225426 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225426 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225426 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225426_20130514_gbm-r_2R_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225426_sample_table.txt norm GSM2225426_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 61 On Wild type 90-100 Methylated >=27 1 3.75 1 2.1 Proneural Grade IV Partial resection Classical placebo EFO EFO_0001674 1 GSM2225425 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 141 male EFO http://purl.obolibrary.org/obo/PATO_0000384 70 On Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 3.84 1 2.4 Proneural Grade V Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225425 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225425 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225425 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225425_20130514_gbm-r_2R_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225425_sample_table.txt norm GSM2225425_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 70 On Wild type 50-80 Methylated <27 1 3.84 1 2.4 Proneural Grade V Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225424 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 140 female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 Off Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 7.95 1 2.6 Mesenchymal Grade V Partial resection Mesenchymal 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225424 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225424 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225424 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225424_20130510_1_1_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225424_sample_table.txt norm GSM2225424_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 Off Wild type 50-80 Non-methylated <27 1 7.95 1 2.6 Mesenchymal Grade V Partial resection Mesenchymal placebo EFO EFO_0001674 2 GSM2225423 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 139 male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 Off Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 29.57 1 11.3 Proneural Grade V Biopsy Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225423 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225423 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225423 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225423_20130510_1_1_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225423_sample_table.txt norm GSM2225423_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 Off Wild type 50-80 Missing <27 0 29.57 1 11.3 Proneural Grade V Biopsy Classical Bevacizumab 1 GSM2225422 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 138 male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.05 1 6.1 Proneural Grade IV Partial resection Neural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225422 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225422 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225422 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225422_20130510_1_1_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225422_sample_table.txt norm GSM2225422_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 Off Wild type 90-100 Non-methylated >=27 1 15.05 1 6.1 Proneural Grade IV Partial resection Neural placebo EFO EFO_0001674 0 GSM2225421 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 137 female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 On Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 4.53 1 2.1 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225421 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225421 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225421 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225421_20130510_1_1_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225421_sample_table.txt norm GSM2225421_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 On Wild type 90-100 Missing >=27 1 4.53 1 2.1 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225420 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 136 male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 On Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 30.16 1 19.1 Proliferative Grade IV Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225420 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225420 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225420 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225420_20130510_1_1_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225420_sample_table.txt norm GSM2225420_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 On Wild type 50-80 Methylated >=27 1 30.16 1 19.1 Proliferative Grade IV Partial resection Classical placebo EFO EFO_0001674 1 GSM2225419 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 135 male EFO http://purl.obolibrary.org/obo/PATO_0000384 84 On Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.28 1 8.6 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225419 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225419 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225419 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225419_20130510_1_1_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225419_sample_table.txt norm GSM2225419_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 84 On Wild type 50-80 Missing >=27 1 10.28 1 8.6 Proneural Grade IV Partial resection Proneural Bevacizumab 0 GSM2225418 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 134 male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 24.48 1 16.3 Proliferative Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225418 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225418 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225418 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225418_20130510_1_1_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225418_sample_table.txt norm GSM2225418_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 Off Wild type 90-100 Non-methylated >=27 1 24.48 1 16.3 Proliferative Grade IV Complete resection Proneural Bevacizumab 0 GSM2225417 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 133 female EFO http://purl.obolibrary.org/obo/PATO_0000383 51 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.73 1 8 Proneural Grade IV Complete resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225417 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225417 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225417 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225417_20130510_1_1_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225417_sample_table.txt norm GSM2225417_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 51 On Wild type 50-80 Non-methylated >=27 1 11.73 1 8 Proneural Grade IV Complete resection Proneural Bevacizumab 1 GSM2225416 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 132 male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 36.83 1 2.2 Proneural Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225416 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225416 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225416 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225416_20130510_1_1_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225416_sample_table.txt norm GSM2225416_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 On Wild type 90-100 Methylated >=27 0 36.83 1 2.2 Proneural Grade IV Complete resection Classical placebo EFO EFO_0001674 0 GSM2225415 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 131 male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 21.95 1 4 Unclassified Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225415 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225415 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225415 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225415_20130510_1_1_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225415_sample_table.txt norm GSM2225415_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 Off Wild type 90-100 Missing >=27 1 21.95 1 4 Unclassified Grade IV Partial resection Classical placebo EFO EFO_0001674 0 GSM2225414 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 130 female EFO http://purl.obolibrary.org/obo/PATO_0000383 64 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 31.74 0 20.3 Proneural Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225414 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225414 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225414 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225414_20130510_1_1_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225414_sample_table.txt norm GSM2225414_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 64 Off Wild type 90-100 Non-methylated >=27 0 31.74 0 20.3 Proneural Grade IV Complete resection Proneural Bevacizumab 0 GSM2225413 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 129 male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 24.71 1 13.9 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225413 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225413 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225413 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225413_20130509_2_BO21990B_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225413_sample_table.txt norm GSM2225413_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 90-100 Non-methylated >=27 1 24.71 1 13.9 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225412 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 128 female EFO http://purl.obolibrary.org/obo/PATO_0000383 61 Off Wild type 90-100 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 30.46 1 17 Mesenchymal Grade V Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225412 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225412 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225412 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225412_20130509_2_BO21990B_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225412_sample_table.txt norm GSM2225412_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 61 Off Wild type 90-100 Missing <27 1 30.46 1 17 Mesenchymal Grade V Partial resection Classical placebo EFO EFO_0001674 0 GSM2225411 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 127 female EFO http://purl.obolibrary.org/obo/PATO_0000383 68 On Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 2.89 1 2.1 Proliferative Grade V Biopsy Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225411 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225411 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225411 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225411_20130509_2_BO21990B_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225411_sample_table.txt norm GSM2225411_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 68 On Wild type 50-80 Missing <27 1 2.89 1 2.1 Proliferative Grade V Biopsy Classical placebo EFO EFO_0001674 1 GSM2225410 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 126 female EFO http://purl.obolibrary.org/obo/PATO_0000383 74 Off Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 4.6 1 4.6 Proneural Grade V Complete resection Proneural 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225410 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225410 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225410 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225410_20130509_2_BO21990B_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225410_sample_table.txt norm GSM2225410_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 74 Off Wild type 50-80 Non-methylated <27 1 4.6 1 4.6 Proneural Grade V Complete resection Proneural Bevacizumab 2 GSM2225409 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 125 male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 32.46 0 2.5 Proneural Grade IV Partial resection Neural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225409 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225409 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225409 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225409_20130509_2_BO21990B_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225409_sample_table.txt norm GSM2225409_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 Off Wild type 90-100 Missing >=27 1 32.46 0 2.5 Proneural Grade IV Partial resection Neural placebo EFO EFO_0001674 0 GSM2225408 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 124 female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 Off Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 32.69 0 20.9 Proliferative Grade V Biopsy Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225408 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225408 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225408 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225408_20130509_2_BO21990B_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225408_sample_table.txt norm GSM2225408_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 59 Off Wild type 50-80 Missing >=27 0 32.69 0 20.9 Proliferative Grade V Biopsy Classical Bevacizumab 1 GSM2225407 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 123 male EFO http://purl.obolibrary.org/obo/PATO_0000384 49 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.51 1 6.1 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225407 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225407 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225407 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225407_20130509_2_BO21990B_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225407_sample_table.txt norm GSM2225407_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 49 Off Wild type 90-100 Non-methylated >=27 1 17.51 1 6.1 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225406 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 122 male EFO http://purl.obolibrary.org/obo/PATO_0000384 71 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.56 1 4.5 Unclassified Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225406 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225406 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225406 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225406_20130509_2_BO21990B_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225406_sample_table.txt norm GSM2225406_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 71 On Wild type 90-100 Non-methylated >=27 1 11.56 1 4.5 Unclassified Grade IV Complete resection Proneural placebo EFO EFO_0001674 0 GSM2225405 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 121 male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 34.17 0 23.9 Unclassified Grade IV Partial resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225405 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225405 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225405 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225405_20130509_2_BO21990B_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225405_sample_table.txt norm GSM2225405_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 Off Wild type 90-100 Non-methylated >=27 0 34.17 0 23.9 Unclassified Grade IV Partial resection Unclassified Bevacizumab 0 GSM2225404 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 120 female EFO http://purl.obolibrary.org/obo/PATO_0000383 67 Off Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.7 1 10.1 Mesenchymal Grade V Complete resection Mesenchymal 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225404 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225404 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225404 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225404_20130509_2_BO21990B_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225404_sample_table.txt norm GSM2225404_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 67 Off Wild type 50-80 Non-methylated <27 1 13.7 1 10.1 Mesenchymal Grade V Complete resection Mesenchymal Bevacizumab 2 GSM2225403 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 119 male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.08 1 9.9 Proneural Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225403 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225403 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225403 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225403_20130509_2_BO21990B_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225403_sample_table.txt norm GSM2225403_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 On Wild type 90-100 Non-methylated >=27 1 15.08 1 9.9 Proneural Grade IV Complete resection Mesenchymal Bevacizumab 1 GSM2225402 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 118 male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 90-100 Non-methylated NA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.4 1 2.3 Mesenchymal Grade IV Complete resection Neural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225402 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225402 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225402 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225402_20130509_1_BO21990-A_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225402_sample_table.txt norm GSM2225402_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 90-100 Non-methylated NA 1 13.4 1 2.3 Mesenchymal Grade IV Complete resection Neural placebo EFO EFO_0001674 1 GSM2225401 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 117 male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.26 1 10 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225401 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225401 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225401 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225401_20130509_1_BO21990-A_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225401_sample_table.txt norm GSM2225401_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 On Wild type 50-80 Non-methylated >=27 1 14.26 1 10 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 1 GSM2225400 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 116 male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 29.17 0 22.4 Proneural Grade IV Complete resection Neural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225400 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225400 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225400 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225400_20130509_1_BO21990-A_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225400_sample_table.txt norm GSM2225400_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 On Wild type 90-100 Methylated >=27 1 29.17 0 22.4 Proneural Grade IV Complete resection Neural placebo EFO EFO_0001674 0 GSM2225399 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 115 male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 18.6 1 10.3 Proneural Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225399 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225399 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225399 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225399_20130509_1_BO21990-A_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225399_sample_table.txt norm GSM2225399_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 Off Wild type 90-100 Non-methylated >=27 1 18.6 1 10.3 Proneural Grade IV Complete resection Proneural placebo EFO EFO_0001674 0 GSM2225398 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 114 male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.71 1 4 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225398 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225398 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225398 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225398_20130509_1_BO21990-A_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225398_sample_table.txt norm GSM2225398_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Non-methylated >=27 1 8.71 1 4 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225397 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 113 male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 26.84 1 6.2 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225397 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225397 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225397 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225397_20130509_1_BO21990-A_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225397_sample_table.txt norm GSM2225397_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 On Wild type 90-100 Non-methylated >=27 1 26.84 1 6.2 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225396 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 112 male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 34.1 0 22.2 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225396 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225396 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225396 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225396_20130509_1_BO21990-A_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225396_sample_table.txt norm GSM2225396_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 Off Wild type 90-100 Methylated >=27 0 34.1 0 22.2 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225395 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 111 male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 34.56 1 3.9 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225395 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225395 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225395 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225395_20130507_2_BO21990_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225395_sample_table.txt norm GSM2225395_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 On Wild type 90-100 Methylated >=27 0 34.56 1 3.9 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225394 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 110 female EFO http://purl.obolibrary.org/obo/PATO_0000383 72 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.38 1 2.1 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225394 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225394 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225394 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225394_20130507_2_BO21990_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225394_sample_table.txt norm GSM2225394_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 72 Off Wild type 90-100 Non-methylated >=27 1 8.38 1 2.1 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225393 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 109 male EFO http://purl.obolibrary.org/obo/PATO_0000384 77 On Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 32.79 0 20.1 Proneural NA NA Proneural NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225393 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225393 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225393 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225393_20130507_2_BO21990_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225393_sample_table.txt norm GSM2225393_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 77 On Wild type 90-100 Missing >=27 0 32.79 0 20.1 Proneural NA NA Proneural Bevacizumab NA GSM2225392 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 108 male EFO http://purl.obolibrary.org/obo/PATO_0000384 66 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.73 1 6 Proliferative Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225392 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225392 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225392 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225392_20130507_2_BO21990_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225392_sample_table.txt norm GSM2225392_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 66 On Wild type 90-100 Non-methylated >=27 1 13.73 1 6 Proliferative Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225391 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 107 male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 15.74 1 11.9 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225391 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225391 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225391 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225391_20130507_2_BO21990_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225391_sample_table.txt norm GSM2225391_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 Off Wild type 90-100 Non-methylated >=27 1 15.74 1 11.9 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225390 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 106 male EFO http://purl.obolibrary.org/obo/PATO_0000384 70 Off Wild type 90-100 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 5.03 1 5 Proneural Grade V Biopsy Neural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225390 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225390 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225390 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225390_20130507_2_BO21990_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225390_sample_table.txt norm GSM2225390_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 70 Off Wild type 90-100 Missing <27 1 5.03 1 5 Proneural Grade V Biopsy Neural placebo EFO EFO_0001674 1 GSM2225389 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 105 female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 On Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 26.61 1 14.8 Unclassified Grade V Biopsy Classical 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225389 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225389 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225389 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225389_20130507_2_BO21990_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225389_sample_table.txt norm GSM2225389_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 63 On Wild type 50-80 Missing >=27 1 26.61 1 14.8 Unclassified Grade V Biopsy Classical placebo EFO EFO_0001674 2 GSM2225388 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 104 male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 5.95 1 5.2 Proneural Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225388 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225388 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225388 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225388_20130507_2_BO21990_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225388_sample_table.txt norm GSM2225388_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 60 Off Wild type 90-100 Non-methylated >=27 1 5.95 1 5.2 Proneural Grade IV Complete resection Proneural Bevacizumab 0 GSM2225387 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 103 female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 Off Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 32.56 1 22.4 Unclassified Grade V Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225387 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225387 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225387 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225387_20130507_2_BO21990_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225387_sample_table.txt norm GSM2225387_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 65 Off Wild type 50-80 Missing <27 0 32.56 1 22.4 Unclassified Grade V Complete resection Classical placebo EFO EFO_0001674 1 GSM2225386 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 102 male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 19.29 1 5.9 Proneural Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225386 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225386 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225386 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225386_20130507_2_BO21990_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225386_sample_table.txt norm GSM2225386_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 90-100 Non-methylated >=27 1 19.29 1 5.9 Proneural Grade IV Complete resection Proneural placebo EFO EFO_0001674 0 GSM2225385 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 101 female EFO http://purl.obolibrary.org/obo/PATO_0000383 51 Off Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 28.39 1 20.5 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225385 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225385 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225385 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225385_20130507_2_BO21990_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225385_sample_table.txt norm GSM2225385_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 51 Off Wild type 50-80 Missing >=27 1 28.39 1 20.5 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225384 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 100 female EFO http://purl.obolibrary.org/obo/PATO_0000383 60 Off Wild type 90-100 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 35.45 0 23 Mesenchymal Grade V Complete resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225384 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225384 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225384 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225384_20130507_2_BO21990_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225384_sample_table.txt norm GSM2225384_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 60 Off Wild type 90-100 Methylated <27 0 35.45 0 23 Mesenchymal Grade V Complete resection Unclassified Bevacizumab 0 GSM2225383 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 99 male EFO http://purl.obolibrary.org/obo/PATO_0000384 73 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.48 1 10 Proliferative Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225383 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225383 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225383 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225383_20130507_1_OB21990_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225383_sample_table.txt norm GSM2225383_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 73 Off Wild type 90-100 Missing >=27 1 17.48 1 10 Proliferative Grade IV Complete resection Classical placebo EFO EFO_0001674 1 GSM2225382 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 98 male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 Off Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.67 1 3.9 Proliferative Grade IV Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225382 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225382 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225382 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225382_20130507_1_OB21990_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225382_sample_table.txt norm GSM2225382_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 Off Wild type 50-80 Methylated >=27 1 13.67 1 3.9 Proliferative Grade IV Partial resection Classical placebo EFO EFO_0001674 1 GSM2225381 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 97 male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 5.85 1 2.4 Proneural Grade V Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225381 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225381 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225381 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225381_20130507_1_OB21990_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225381_sample_table.txt norm GSM2225381_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 Off Wild type 90-100 Non-methylated <27 1 5.85 1 2.4 Proneural Grade V Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225380 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 96 male EFO http://purl.obolibrary.org/obo/PATO_0000384 44 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 3.42 1 3.2 Proliferative Grade III Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225380 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225380 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225380 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225380_20130507_1_OB21990_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225380_sample_table.txt norm GSM2225380_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 44 Off Wild type 90-100 Non-methylated >=27 1 3.42 1 3.2 Proliferative Grade III Complete resection Classical Bevacizumab 0 GSM2225379 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 95 male EFO http://purl.obolibrary.org/obo/PATO_0000384 32 Off Mutant 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 37.98 0 26.7 Proneural NA NA Proneural NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225379 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225379 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225379 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225379_20130507_1_OB21990_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225379_sample_table.txt norm GSM2225379_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 32 Off Mutant 90-100 Non-methylated >=27 0 37.98 0 26.7 Proneural NA NA Proneural Bevacizumab NA GSM2225378 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 94 female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 On Wild type 90-100 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.84 1 7.6 Mesenchymal Grade V Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225378 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225378 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225378 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225378_20130507_1_OB21990_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225378_sample_table.txt norm GSM2225378_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 66 On Wild type 90-100 Methylated <27 1 8.84 1 7.6 Mesenchymal Grade V Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225377 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 93 male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 90-100 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.56 1 5.7 Proliferative Grade V Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225377 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225377 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225377 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225377_20130507_1_OB21990_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225377_sample_table.txt norm GSM2225377_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 On Wild type 90-100 Missing <27 1 11.56 1 5.7 Proliferative Grade V Partial resection Proneural Bevacizumab 1 GSM2225376 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 92 male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 Off Mutant 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.45 1 12 Proneural NA NA Proneural NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225376 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225376 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225376 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225376_20130507_1_OB21990_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225376_sample_table.txt norm GSM2225376_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 Off Mutant 50-80 Methylated >=27 1 17.45 1 12 Proneural NA NA Proneural Bevacizumab NA GSM2225375 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 91 female EFO http://purl.obolibrary.org/obo/PATO_0000383 36 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 21.88 1 10.4 Mesenchymal Grade III Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225375 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225375 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225375 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225375_20130507_1_OB21990_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225375_sample_table.txt norm GSM2225375_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 36 Off Wild type 90-100 Methylated >=27 1 21.88 1 10.4 Mesenchymal Grade III Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225374 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 90 male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.08 1 8.3 Proliferative Grade V Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225374 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225374 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225374 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225374_20130506_0506013b_02_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225374_sample_table.txt norm GSM2225374_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 50-80 Non-methylated <27 1 13.08 1 8.3 Proliferative Grade V Complete resection Classical Bevacizumab 1 GSM2225373 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 89 female EFO http://purl.obolibrary.org/obo/PATO_0000383 57 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9.76 1 7 Proliferative Grade IV Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225373 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225373 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225373 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225373_20130506_0506013b_02_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225373_sample_table.txt norm GSM2225373_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 57 On Wild type 50-80 Non-methylated >=27 1 9.76 1 7 Proliferative Grade IV Partial resection Classical Bevacizumab 1 GSM2225372 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 88 female EFO http://purl.obolibrary.org/obo/PATO_0000383 71 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 22.47 1 9 Proneural Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225372 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225372 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225372 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225372_20130506_0506013b_02_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225372_sample_table.txt norm GSM2225372_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 71 Off Wild type 90-100 Methylated >=27 1 22.47 1 9 Proneural Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225371 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 87 male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 On Wild type 90-100 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.24 1 4.1 Proneural Grade V Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225371 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225371 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225371 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225371_20130506_0506013b_02_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225371_sample_table.txt norm GSM2225371_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 On Wild type 90-100 Methylated <27 1 11.24 1 4.1 Proneural Grade V Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225370 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 86 male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 28.68 1 17.9 Proliferative Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225370 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225370 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225370 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225370_20130506_0506013b_02_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225370_sample_table.txt norm GSM2225370_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 Off Wild type 90-100 Non-methylated >=27 1 28.68 1 17.9 Proliferative Grade IV Complete resection Classical Bevacizumab 0 GSM2225369 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 85 male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.09 1 12 Proneural Grade IV Complete resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225369 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225369 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225369 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225369_20130506_0506013b_02_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225369_sample_table.txt norm GSM2225369_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 Off Wild type 90-100 Missing >=27 1 14.09 1 12 Proneural Grade IV Complete resection Proneural Bevacizumab 1 GSM2225368 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 84 male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.91 1 5.9 Proliferative Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225368 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225368 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225368 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225368_20130506_0506013b_02_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225368_sample_table.txt norm GSM2225368_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 55 On Wild type 50-80 Non-methylated >=27 1 10.91 1 5.9 Proliferative Grade IV Complete resection Classical Bevacizumab 1 GSM2225367 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 83 male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 32.95 1 20.6 Mesenchymal Grade IV Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225367 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225367 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225367 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225367_20130506_0506013b_02_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225367_sample_table.txt norm GSM2225367_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 58 Off Wild type 90-100 Methylated >=27 0 32.95 1 20.6 Mesenchymal Grade IV Partial resection Classical placebo EFO EFO_0001674 0 GSM2225366 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 82 male EFO http://purl.obolibrary.org/obo/PATO_0000384 75 Off Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.64 1 10.6 Proliferative Grade V Complete resection Classical 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225366 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225366 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225366 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225366_20130506_0506013b_02_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225366_sample_table.txt norm GSM2225366_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 75 Off Wild type 50-80 Methylated <27 1 10.64 1 10.6 Proliferative Grade V Complete resection Classical Bevacizumab 2 GSM2225365 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 81 female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.51 1 6 Proneural Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225365 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225365 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225365 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225365_20130506_0506013b_02_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225365_sample_table.txt norm GSM2225365_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 Off Wild type 90-100 Methylated >=27 1 10.51 1 6 Proneural Grade IV Complete resection Classical Bevacizumab 1 GSM2225364 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 80 female EFO http://purl.obolibrary.org/obo/PATO_0000383 48 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9.86 1 8.1 Proneural Grade III Biopsy Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225364 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225364 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225364 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225364_20130506_0506013b_02_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225364_sample_table.txt norm GSM2225364_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 48 On Wild type 90-100 Non-methylated >=27 1 9.86 1 8.1 Proneural Grade III Biopsy Proneural Bevacizumab 0 GSM2225363 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 79 male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 18.07 1 2.5 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225363 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225363 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225363 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225363_20130506_0506013b_02_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225363_sample_table.txt norm GSM2225363_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 90-100 Non-methylated >=27 1 18.07 1 2.5 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225362 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 78 male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.44 1 2.2 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225362 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225362 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225362 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225362_20130506_05062103a_01_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225362_sample_table.txt norm GSM2225362_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 Off Wild type 90-100 Non-methylated >=27 1 13.44 1 2.2 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225361 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 77 female EFO http://purl.obolibrary.org/obo/PATO_0000383 72 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 36.24 0 21.5 Unclassified Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225361 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225361 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225361 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225361_20130506_05062103a_01_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225361_sample_table.txt norm GSM2225361_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 72 Off Wild type 90-100 Methylated >=27 0 36.24 0 21.5 Unclassified Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225360 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 76 male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.99 1 6 Proneural NA NA Proneural NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225360 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225360 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225360 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225360_20130506_05062103a_01_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225360_sample_table.txt norm GSM2225360_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 On Wild type 90-100 Non-methylated >=27 1 11.99 1 6 Proneural NA NA Proneural Bevacizumab NA GSM2225359 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 75 female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.26 1 2.3 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225359 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225359 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225359 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225359_20130506_05062103a_01_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225359_sample_table.txt norm GSM2225359_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 Off Wild type 90-100 Non-methylated >=27 1 14.26 1 2.3 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225358 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 74 male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 On Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.79 1 8 Unclassified Grade V Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225358 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225358 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225358 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225358_20130506_05062103a_01_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225358_sample_table.txt norm GSM2225358_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 On Wild type 90-100 Non-methylated <27 1 11.79 1 8 Unclassified Grade V Complete resection Mesenchymal Bevacizumab 0 GSM2225357 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 73 male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 13.67 1 7.6 Unclassified Grade V Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225357 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225357 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225357 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225357_20130506_05062103a_01_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225357_sample_table.txt norm GSM2225357_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 Off Wild type 90-100 Non-methylated <27 1 13.67 1 7.6 Unclassified Grade V Partial resection Classical placebo EFO EFO_0001674 1 GSM2225356 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 72 female EFO http://purl.obolibrary.org/obo/PATO_0000383 52 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.44 1 4.5 Proliferative Grade V Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225356 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225356 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225356 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225356_20130506_05062103a_01_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225356_sample_table.txt norm GSM2225356_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 52 Off Wild type 90-100 Non-methylated <27 1 8.44 1 4.5 Proliferative Grade V Complete resection Classical Bevacizumab 1 GSM2225355 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 71 female EFO http://purl.obolibrary.org/obo/PATO_0000383 73 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 24.34 1 12 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225355 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225355 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225355 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225355_20130506_05062103a_01_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225355_sample_table.txt norm GSM2225355_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 73 On Wild type 90-100 Non-methylated >=27 1 24.34 1 12 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225354 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 70 male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 32.03 0 20 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225354 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225354 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225354 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225354_20130506_05062103a_01_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225354_sample_table.txt norm GSM2225354_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 Off Wild type 90-100 Methylated >=27 0 32.03 0 20 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225353 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 69 female EFO http://purl.obolibrary.org/obo/PATO_0000383 48 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 21.98 1 5.6 Proneural Grade III Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225353 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225353 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225353 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225353_20130506_05062103a_01_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225353_sample_table.txt norm GSM2225353_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 48 On Wild type 90-100 Non-methylated >=27 1 21.98 1 5.6 Proneural Grade III Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225352 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 68 male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9.46 1 5.7 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225352 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225352 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225352 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225352_20130506_05062103a_01_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225352_sample_table.txt norm GSM2225352_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 65 Off Wild type 90-100 Non-methylated >=27 1 9.46 1 5.7 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 0 GSM2225351 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 67 male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.29 1 4.4 Unclassified Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225351 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225351 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225351 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225351_20130503_set2_BO21990_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225351_sample_table.txt norm GSM2225351_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 52 Off Wild type 90-100 Non-methylated >=27 1 14.29 1 4.4 Unclassified Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225350 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 66 male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 7.89 0 2.1 Unclassified Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225350 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225350 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225350 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225350_20130503_set2_BO21990_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225350_sample_table.txt norm GSM2225350_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 68 Off Wild type 90-100 Missing >=27 0 7.89 0 2.1 Unclassified Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225349 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 65 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 On Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 34.1 1 23.7 Unclassified Grade IV Partial resection Unclassified 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225349 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225349 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225349 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225349_20130503_set2_BO21990_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225349_sample_table.txt norm GSM2225349_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 On Wild type 50-80 Missing >=27 1 34.1 1 23.7 Unclassified Grade IV Partial resection Unclassified Bevacizumab 1 GSM2225348 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 64 male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 24.02 1 9.7 Proneural Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225348 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225348 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225348 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225348_20130503_set2_BO21990_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225348_sample_table.txt norm GSM2225348_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 On Wild type 90-100 Non-methylated >=27 1 24.02 1 9.7 Proneural Grade IV Complete resection Classical placebo EFO EFO_0001674 0 GSM2225347 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 63 female EFO http://purl.obolibrary.org/obo/PATO_0000383 51 Off Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 29.77 1 2.3 Unclassified Grade IV Partial resection Unclassified 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225347 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225347 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225347 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225347_20130503_set2_BO21990_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225347_sample_table.txt norm GSM2225347_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 51 Off Wild type 50-80 Methylated >=27 1 29.77 1 2.3 Unclassified Grade IV Partial resection Unclassified placebo EFO EFO_0001674 1 GSM2225346 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 62 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9.07 1 2.6 Proliferative Grade V Partial resection Classical 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225346 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225346 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225346 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225346_20130503_set2_BO21990_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225346_sample_table.txt norm GSM2225346_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 50-80 Methylated <27 1 9.07 1 2.6 Proliferative Grade V Partial resection Classical Bevacizumab 2 GSM2225345 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 61 female EFO http://purl.obolibrary.org/obo/PATO_0000383 53 Off Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 3.58 1 3.6 Proneural Grade V Biopsy Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225345 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225345 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225345 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225345_20130503_set2_BO21990_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225345_sample_table.txt norm GSM2225345_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 53 Off Wild type 50-80 Methylated <27 1 3.58 1 3.6 Proneural Grade V Biopsy Proneural Bevacizumab 1 GSM2225344 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 60 male EFO http://purl.obolibrary.org/obo/PATO_0000384 44 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 41.69 0 31.4 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225344 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225344 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225344 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225344_20130503_set2_BO21990_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225344_sample_table.txt norm GSM2225344_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 44 On Wild type 50-80 Non-methylated >=27 0 41.69 0 31.4 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 1 GSM2225343 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 59 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 31.11 0 19.4 Mesenchymal Grade IV Complete resection Unclassified 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225343 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225343 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225343 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225343_20130503_set2_BO21990_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225343_sample_table.txt norm GSM2225343_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 90-100 Non-methylated >=27 0 31.11 0 19.4 Mesenchymal Grade IV Complete resection Unclassified Bevacizumab 1 GSM2225342 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 58 female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 On Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 28.94 1 16.4 Proneural Grade V Partial resection Neural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225342 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225342 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225342 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225342_20130503_set2_BO21990_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225342_sample_table.txt norm GSM2225342_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 On Wild type 50-80 Methylated <27 1 28.94 1 16.4 Proneural Grade V Partial resection Neural placebo EFO EFO_0001674 1 GSM2225341 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 57 female EFO http://purl.obolibrary.org/obo/PATO_0000383 45 Off Wild type 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 38.08 1 24.3 Proneural Grade IV Complete resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225341 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225341 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225341 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225341_20130503_set2_BO21990_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225341_sample_table.txt norm GSM2225341_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 45 Off Wild type 50-80 Methylated >=27 0 38.08 1 24.3 Proneural Grade IV Complete resection Proneural Bevacizumab 1 GSM2225340 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 56 male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 7.26 1 2.3 Mesenchymal Grade IV Complete resection Mesenchymal 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225340 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225340 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225340 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225340_20130503_set2_BO21990_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225340_sample_table.txt norm GSM2225340_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 50-80 Non-methylated >=27 1 7.26 1 2.3 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 2 GSM2225339 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 55 male EFO http://purl.obolibrary.org/obo/PATO_0000384 39 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 4.17 1 4.2 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225339 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225339 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225339 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225339_20130503_set1_BO21990_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225339_sample_table.txt norm GSM2225339_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 39 Off Wild type 50-80 Non-methylated >=27 1 4.17 1 4.2 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225338 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 54 male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 On Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 22.57 1 16.7 Mesenchymal Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225338 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225338 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225338 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225338_20130503_set1_BO21990_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225338_sample_table.txt norm GSM2225338_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 On Wild type 90-100 Methylated >=27 1 22.57 1 16.7 Mesenchymal Grade IV Complete resection Classical placebo EFO EFO_0001674 0 GSM2225337 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 53 male EFO http://purl.obolibrary.org/obo/PATO_0000384 45 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 19.12 1 13.6 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225337 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225337 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225337 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225337_20130503_set1_BO21990_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225337_sample_table.txt norm GSM2225337_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 45 On Wild type 90-100 Non-methylated >=27 1 19.12 1 13.6 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225336 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 52 male EFO http://purl.obolibrary.org/obo/PATO_0000384 46 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.32 1 2.1 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225336 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225336 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225336 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225336_20130503_set1_BO21990_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225336_sample_table.txt norm GSM2225336_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 46 Off Wild type 90-100 Non-methylated >=27 1 14.32 1 2.1 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225335 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 51 male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 26.84 1 12.4 Proneural Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225335 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225335 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225335 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225335_20130503_set1_BO21990_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225335_sample_table.txt norm GSM2225335_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Methylated >=27 1 26.84 1 12.4 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 0 GSM2225334 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 50 male EFO http://purl.obolibrary.org/obo/PATO_0000384 36 On Wild type 50-80 Non-methylated NA Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.19 1 7.9 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225334 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225334 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225334 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225334_20130503_set1_BO21990_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225334_sample_table.txt norm GSM2225334_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 36 On Wild type 50-80 Non-methylated NA 1 12.19 1 7.9 Proneural Grade IV Partial resection Proneural Bevacizumab 1 GSM2225333 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 49 female EFO http://purl.obolibrary.org/obo/PATO_0000383 64 On Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.74 1 2.3 Unclassified Grade V Biopsy Mesenchymal 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225333 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225333 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225333 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225333_20130503_set1_BO21990_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225333_sample_table.txt norm GSM2225333_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 64 On Wild type 50-80 Missing >=27 1 8.74 1 2.3 Unclassified Grade V Biopsy Mesenchymal placebo EFO EFO_0001674 2 GSM2225332 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 48 female EFO http://purl.obolibrary.org/obo/PATO_0000383 67 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 36.4 1 25.1 Unclassified Grade IV Complete resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225332 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225332 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225332 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225332_20130503_set1_BO21990_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225332_sample_table.txt norm GSM2225332_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 67 Off Wild type 90-100 Non-methylated >=27 0 36.4 1 25.1 Unclassified Grade IV Complete resection Unclassified placebo EFO EFO_0001674 0 GSM2225331 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 47 male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 On Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 4.93 1 4.8 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225331 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225331 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225331 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225331_20130503_set1_BO21990_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225331_sample_table.txt norm GSM2225331_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 On Wild type 50-80 Missing >=27 1 4.93 1 4.8 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225330 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 46 male EFO http://purl.obolibrary.org/obo/PATO_0000384 78 Off Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 10.84 0 9.9 Proneural Grade V Complete resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225330 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225330 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225330 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225330_20130503_set1_BO21990_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225330_sample_table.txt norm GSM2225330_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 78 Off Wild type 50-80 Non-methylated <27 0 10.84 0 9.9 Proneural Grade V Complete resection Proneural placebo EFO EFO_0001674 1 GSM2225329 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 45 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.32 1 5.8 Mesenchymal Grade IV Complete resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225329 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225329 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225329 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225329_20130503_set1_BO21990_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225329_sample_table.txt norm GSM2225329_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 Off Wild type 90-100 Missing >=27 1 12.32 1 5.8 Mesenchymal Grade IV Complete resection Proneural placebo EFO EFO_0001674 1 GSM2225328 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 44 male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 30.32 1 14.7 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225328 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225328 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225328 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225328_20130503_set1_BO21990_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225328_sample_table.txt norm GSM2225328_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 50 Off Wild type 90-100 Methylated >=27 1 30.32 1 14.7 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225327 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 43 male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 20.21 1 14.1 Proneural Grade IV Complete resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225327 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225327 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225327 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225327_20130502_GBM_set2_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225327_sample_table.txt norm GSM2225327_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 56 Off Wild type 90-100 Non-methylated >=27 1 20.21 1 14.1 Proneural Grade IV Complete resection Classical Bevacizumab 1 GSM2225326 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 42 female EFO http://purl.obolibrary.org/obo/PATO_0000383 48 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.79 1 10.1 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225326 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225326 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225326 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225326_20130502_GBM_set2_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225326_sample_table.txt norm GSM2225326_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 48 Off Wild type 50-80 Non-methylated >=27 1 16.79 1 10.1 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 1 GSM2225325 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 41 female EFO http://purl.obolibrary.org/obo/PATO_0000383 62 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.63 1 7.9 Mesenchymal Grade IV Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225325 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225325 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225325 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225325_20130502_GBM_set2_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225325_sample_table.txt norm GSM2225325_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 62 On Wild type 50-80 Non-methylated >=27 1 11.63 1 7.9 Mesenchymal Grade IV Partial resection Classical Bevacizumab 1 GSM2225324 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 40 male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 Off Wild type 50-80 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 19.35 1 18.2 Proneural Grade V Partial resection Proneural 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225324 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225324 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225324 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225324_20130502_GBM_set2_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225324_sample_table.txt norm GSM2225324_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 Off Wild type 50-80 Methylated <27 1 19.35 1 18.2 Proneural Grade V Partial resection Proneural Bevacizumab 2 GSM2225323 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 39 male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 21.68 1 14 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225323 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225323 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225323 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225323_20130502_GBM_set2_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225323_sample_table.txt norm GSM2225323_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 Off Wild type 90-100 Missing >=27 1 21.68 1 14 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225322 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 38 male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 On Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 1.28 1 1 Proliferative Grade V Biopsy Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225322 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225322 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225322 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225322_20130502_GBM_set2_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225322_sample_table.txt norm GSM2225322_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 51 On Wild type 50-80 Missing <27 1 1.28 1 1 Proliferative Grade V Biopsy Classical Bevacizumab 1 GSM2225321 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 37 male EFO http://purl.obolibrary.org/obo/PATO_0000384 41 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.32 1 9.8 Proliferative Grade IV Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225321 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225321 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225321 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225321_20130502_GBM_set2_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225321_sample_table.txt norm GSM2225321_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 41 On Wild type 90-100 Non-methylated >=27 1 14.32 1 9.8 Proliferative Grade IV Partial resection Classical Bevacizumab 1 GSM2225320 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 36 male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.16 1 9.8 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225320 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225320 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225320 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225320_20130502_GBM_set2_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225320_sample_table.txt norm GSM2225320_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 50-80 Non-methylated >=27 1 14.16 1 9.8 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225319 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 35 male EFO http://purl.obolibrary.org/obo/PATO_0000384 69 Off Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.38 1 6 Unclassified Grade V Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225319 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225319 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225319 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225319_20130502_GBM_set2_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225319_sample_table.txt norm GSM2225319_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 69 Off Wild type 50-80 Non-methylated <27 1 8.38 1 6 Unclassified Grade V Partial resection Classical Bevacizumab 1 GSM2225318 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 34 female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.3 1 2.1 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225318 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225318 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225318 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225318_20130502_GBM_set2_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225318_sample_table.txt norm GSM2225318_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 54 Off Wild type 50-80 Non-methylated >=27 1 16.3 1 2.1 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225317 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 33 female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 3.61 1 2.3 Mesenchymal Grade IV Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225317 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225317 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225317 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225317_20130502_BO21990_set1_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225317_sample_table.txt norm GSM2225317_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 69 On Wild type 50-80 Non-methylated >=27 1 3.61 1 2.3 Mesenchymal Grade IV Partial resection Classical placebo EFO EFO_0001674 1 GSM2225316 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 32 male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 39.1 1 18.4 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225316 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225316 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225316 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225316_20130502_BO21990_set1_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225316_sample_table.txt norm GSM2225316_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 61 Off Wild type 90-100 Non-methylated >=27 0 39.1 1 18.4 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225315 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 31 male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 Off Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 5.45 1 5.5 Mesenchymal Grade V Complete resection Mesenchymal 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225315 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225315 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225315 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225315_20130502_BO21990_set1_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225315_sample_table.txt norm GSM2225315_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 64 Off Wild type 50-80 Missing <27 1 5.45 1 5.5 Mesenchymal Grade V Complete resection Mesenchymal placebo EFO EFO_0001674 2 GSM2225314 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 30 male EFO http://purl.obolibrary.org/obo/PATO_0000384 74 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 8.94 1 5.8 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225314 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225314 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225314 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225314_20130502_BO21990_set1_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225314_sample_table.txt norm GSM2225314_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 74 On Wild type 90-100 Non-methylated >=27 1 8.94 1 5.8 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 1 GSM2225313 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 29 male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 18.33 1 2.1 Mesenchymal Grade IV Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225313 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225313 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225313 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225313_20130502_BO21990_set1_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225313_sample_table.txt norm GSM2225313_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 Off Wild type 90-100 Non-methylated >=27 1 18.33 1 2.1 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225312 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 28 female EFO http://purl.obolibrary.org/obo/PATO_0000383 38 On Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.99 1 6.3 Mesenchymal Grade III Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225312 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225312 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225312 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225312_20130502_BO21990_set1_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225312_sample_table.txt norm GSM2225312_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 38 On Wild type 90-100 Missing >=27 1 11.99 1 6.3 Mesenchymal Grade III Partial resection Mesenchymal Bevacizumab 0 GSM2225311 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 27 male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 30.39 0 18.3 Proneural Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225311 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225311 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225311 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225311_20130502_BO21990_set1_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225311_sample_table.txt norm GSM2225311_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 57 Off Wild type 90-100 Non-methylated >=27 0 30.39 0 18.3 Proneural Grade IV Complete resection Proneural placebo EFO EFO_0001674 0 GSM2225310 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 26 male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 On Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.32 1 6 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225310 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225310 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225310 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225310_20130502_BO21990_set1_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225310_sample_table.txt norm GSM2225310_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 On Wild type 50-80 Missing >=27 1 12.32 1 6 Mesenchymal Grade IV Partial resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225309 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 25 male EFO http://purl.obolibrary.org/obo/PATO_0000384 70 Off Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 26.84 1 20.5 Mesenchymal Grade V Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225309 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225309 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225309 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225309_20130502_BO21990_set1_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225309_sample_table.txt norm GSM2225309_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 70 Off Wild type 50-80 Non-methylated <27 1 26.84 1 20.5 Mesenchymal Grade V Partial resection Mesenchymal Bevacizumab 1 GSM2225308 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 24 female EFO http://purl.obolibrary.org/obo/PATO_0000383 62 On Wild type 90-100 Methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 30.26 0 18.5 Proneural Grade V Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225308 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225308 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225308 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225308_20130501_set2_BO21990_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225308_sample_table.txt norm GSM2225308_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 62 On Wild type 90-100 Methylated <27 0 30.26 0 18.5 Proneural Grade V Complete resection Proneural placebo EFO EFO_0001674 0 GSM2225307 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 23 male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 9.86 1 6.1 Unclassified Grade IV Partial resection Unclassified 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225307 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225307 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225307 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225307_20130501_set2_BO21990_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225307_sample_table.txt norm GSM2225307_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 72 Off Wild type 90-100 Non-methylated >=27 1 9.86 1 6.1 Unclassified Grade IV Partial resection Unclassified placebo EFO EFO_0001674 0 GSM2225306 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 22 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 23.06 1 10 Proliferative Grade IV Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225306 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225306 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225306 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225306_20130501_set2_BO21990_10.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225306_sample_table.txt norm GSM2225306_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 On Wild type 90-100 Non-methylated >=27 1 23.06 1 10 Proliferative Grade IV Complete resection Classical Bevacizumab 0 GSM2225305 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 21 male EFO http://purl.obolibrary.org/obo/PATO_0000384 70 On Wild type 50-80 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 5.22 1 5.2 Mesenchymal Grade V Partial resection Mesenchymal 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225305 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225305 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225305 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225305_20130501_set2_BO21990_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225305_sample_table.txt norm GSM2225305_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 70 On Wild type 50-80 Non-methylated <27 1 5.22 1 5.2 Mesenchymal Grade V Partial resection Mesenchymal placebo EFO EFO_0001674 2 GSM2225304 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 20 male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 On Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.1 1 4.1 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225304 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225304 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225304 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225304_20130501_set2_BO21990_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225304_sample_table.txt norm GSM2225304_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 On Wild type 50-80 Missing >=27 1 11.1 1 4.1 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225303 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 19 female EFO http://purl.obolibrary.org/obo/PATO_0000383 49 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 21.72 1 4.2 Mesenchymal Grade IV Complete resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225303 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225303 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225303 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225303_20130501_set2_BO21990_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225303_sample_table.txt norm GSM2225303_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 49 Off Wild type 90-100 Methylated >=27 1 21.72 1 4.2 Mesenchymal Grade IV Complete resection Mesenchymal placebo EFO EFO_0001674 1 GSM2225302 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 18 male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 6.57 1 4.3 Proliferative Grade IV Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225302 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225302 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225302 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225302_20130501_set2_BO21990_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225302_sample_table.txt norm GSM2225302_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 Off Wild type 90-100 Non-methylated >=27 1 6.57 1 4.3 Proliferative Grade IV Partial resection Proneural Bevacizumab 0 GSM2225301 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 17 male EFO http://purl.obolibrary.org/obo/PATO_0000384 49 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 14.75 1 11.8 Mesenchymal Grade IV Partial resection Mesenchymal 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225301 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225301 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225301 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225301_20130501_set2_BO21990_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225301_sample_table.txt norm GSM2225301_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 49 Off Wild type 50-80 Non-methylated >=27 1 14.75 1 11.8 Mesenchymal Grade IV Partial resection Mesenchymal Bevacizumab 1 GSM2225300 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 16 male EFO http://purl.obolibrary.org/obo/PATO_0000384 45 Off Mutant 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 37.72 1 22.8 Proneural NA NA Proneural NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225300 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225300 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225300 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225300_20130501_set2_BO21990_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225300_sample_table.txt norm GSM2225300_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 45 Off Mutant 90-100 Methylated >=27 1 37.72 1 22.8 Proneural NA NA Proneural placebo EFO EFO_0001674 NA GSM2225299 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 15 male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 17.22 1 11.1 Mesenchymal Grade IV Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225299 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225299 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225299 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225299_20130501_set2_BO21990_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225299_sample_table.txt norm GSM2225299_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 59 Off Wild type 90-100 Non-methylated >=27 1 17.22 1 11.1 Mesenchymal Grade IV Complete resection Mesenchymal Bevacizumab 0 GSM2225298 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 14 male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 5.88 1 2.1 Proneural Grade IV Complete resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225298 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225298 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225298 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225298_20130501_set2_BO21990_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225298_sample_table.txt norm GSM2225298_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 67 Off Wild type 90-100 Missing >=27 1 5.88 1 2.1 Proneural Grade IV Complete resection Proneural placebo EFO EFO_0001674 0 GSM2225297 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 13 male EFO http://purl.obolibrary.org/obo/PATO_0000384 74 On Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 6.28 1 5.1 Proneural Grade V Complete resection Proneural 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225297 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225297 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225297 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225297_20130501_set2_BO21990_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225297_sample_table.txt norm GSM2225297_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 74 On Wild type 50-80 Missing <27 1 6.28 1 5.1 Proneural Grade V Complete resection Proneural placebo EFO EFO_0001674 2 GSM2225296 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 12 female EFO http://purl.obolibrary.org/obo/PATO_0000383 37 Off Mutant 50-80 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 41.43 0 29.5 Proneural NA NA Proneural NA P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225296 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225296 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225296 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225296_20130501_set1_BO21990_12.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225296_sample_table.txt norm GSM2225296_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 37 Off Mutant 50-80 Methylated >=27 0 41.43 0 29.5 Proneural NA NA Proneural placebo EFO EFO_0001674 NA GSM2225295 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 11 male EFO http://purl.obolibrary.org/obo/PATO_0000384 49 Off Wild type 90-100 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.6 1 7.7 Unclassified Grade III Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225295 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225295 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225295 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225295_20130501_set1_BO21990_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225295_sample_table.txt norm GSM2225295_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 49 Off Wild type 90-100 Missing >=27 1 11.6 1 7.7 Unclassified Grade III Partial resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225294 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 10 male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 50-80 Missing >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.33 1 8.8 Proneural Grade V Biopsy Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225294 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225294 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225294 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225294_20130521_gbm-2_2_11.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225294_sample_table.txt norm GSM2225294_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 50-80 Missing >=27 1 11.33 1 8.8 Proneural Grade V Biopsy Proneural placebo EFO EFO_0001674 1 GSM2225293 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 9 male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 On Wild type 50-80 Missing <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 24.08 1 17.8 Mesenchymal Grade V Partial resection Unclassified 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225293 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225293 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225293 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225293_20130501_set1_BO21990_09.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225293_sample_table.txt norm GSM2225293_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 63 On Wild type 50-80 Missing <27 1 24.08 1 17.8 Mesenchymal Grade V Partial resection Unclassified placebo EFO EFO_0001674 1 GSM2225292 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 8 male EFO http://purl.obolibrary.org/obo/PATO_0000384 42 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 16.76 1 6 Mesenchymal Grade III Complete resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225292 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225292 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225292 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225292_20130501_set1_BO21990_08.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225292_sample_table.txt norm GSM2225292_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 42 Off Wild type 90-100 Non-methylated >=27 1 16.76 1 6 Mesenchymal Grade III Complete resection Mesenchymal placebo EFO EFO_0001674 0 GSM2225291 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 7 male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 Off Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 1.91 1 1.9 Proliferative Grade IV Partial resection Classical 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225291 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225291 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225291 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225291_20130501_set1_BO21990_07.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225291_sample_table.txt norm GSM2225291_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 Off Wild type 50-80 Non-methylated >=27 1 1.91 1 1.9 Proliferative Grade IV Partial resection Classical Bevacizumab 1 GSM2225290 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 6 male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.19 1 7.6 Mesenchymal Grade V Partial resection Mesenchymal 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225290 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225290 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225290 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225290_20130501_set1_BO21990_06.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225290_sample_table.txt norm GSM2225290_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 53 Off Wild type 90-100 Non-methylated <27 1 12.19 1 7.6 Mesenchymal Grade V Partial resection Mesenchymal Bevacizumab 0 GSM2225289 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 5 male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 7.16 1 2.4 Proneural Grade IV Partial resection Proneural 1 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225289 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225289 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225289 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225289_20130501_set1_BO21990_05.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225289_sample_table.txt norm GSM2225289_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 54 On Wild type 90-100 Non-methylated >=27 1 7.16 1 2.4 Proneural Grade IV Partial resection Proneural placebo EFO EFO_0001674 1 GSM2225288 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 4 male EFO http://purl.obolibrary.org/obo/PATO_0000384 37 Off Wild type 90-100 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 10.05 1 6 Mesenchymal Grade III Complete resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225288 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225288 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225288 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225288_20130501_set1_BO21990_04.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225288_sample_table.txt norm GSM2225288_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 37 Off Wild type 90-100 Non-methylated >=27 1 10.05 1 6 Mesenchymal Grade III Complete resection Classical placebo EFO EFO_0001674 0 GSM2225287 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 3 male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 On Wild type 50-80 Non-methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 12.55 1 7.9 Proneural Grade IV Partial resection Proneural 2 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225287 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225287 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225287 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225287_20130501_set1_BO21990_03.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225287_sample_table.txt norm GSM2225287_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 47 On Wild type 50-80 Non-methylated >=27 1 12.55 1 7.9 Proneural Grade IV Partial resection Proneural Bevacizumab 2 GSM2225286 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 2 male EFO http://purl.obolibrary.org/obo/PATO_0000384 48 Off Wild type 90-100 Methylated >=27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 0 41.49 1 5.8 Proneural Grade III Partial resection Proneural 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225286 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225286 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225286 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225286_20130501_set1_BO21990_02.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225286_sample_table.txt norm GSM2225286_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip male EFO http://purl.obolibrary.org/obo/PATO_0000384 48 Off Wild type 90-100 Methylated >=27 0 41.49 1 5.8 Proneural Grade III Partial resection Proneural Bevacizumab 0 GSM2225285 1 Microdissected FFPE tumor sample, newly diagnosed supratentorial glioblastoma Patient 1 female EFO http://purl.obolibrary.org/obo/PATO_0000383 75 Off Wild type 90-100 Non-methylated <27 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 1 11.99 1 7.9 Proliferative Grade V Partial resection Classical 0 P-GSE84010-2 ArrayExpress P-GSE84010-3 ArrayExpress P-GSE84010-4 ArrayExpress GSM2225285 extract 1 total RNA P-GSE84010-5 ArrayExpress GSM2225285 LE 1 Nucleotide/fluorophore barcode P-GSE84010-6 ArrayExpress GSM2225285 A-GEOD-22111 ArrayExpress array assay P-GSE84010-7 ArrayExpress GSM2225285_20130501_set1_BO21990_01.RCC ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.raw.1.zip P-GSE84010-1 ArrayExpress GSM2225285_sample_table.txt norm GSM2225285_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-84010/E-GEOD-84010.processed.1.zip female EFO http://purl.obolibrary.org/obo/PATO_0000383 75 Off Wild type 90-100 Non-methylated <27 1 11.99 1 7.9 Proliferative Grade V Partial resection Classical Bevacizumab 0