Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [cell line] Characteristics [cell type] Characteristics [organism] Term Source REF Term Accession Number Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Comment [INSTRUMENT_MODEL] Comment [LIBRARY_SELECTION] Comment [LIBRARY_SOURCE] Comment [LIBRARY_STRATEGY] Material Type Assay Name Comment [ENA_EXPERIMENT] Comment [Platform_title] Technology Type GSM1930762 1 processed data MCF10A_BRG1_CHIP.ucsc.bedGraph.gz processed data MCF10A_BRG1_peaks.bed Mammary epithelial cell line MCF-10A wildtype BRG1 ChIPseq Replicate2 Pulldown MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-5 ArrayExpress GSM1930762 extract 1 Illumina HiSeq 2000 ChIP genomic ChIP-Seq genomic DNA GSM1930762 SRX1420584 Illumina HiSeq 2000 (Homo sapiens) sequencing assay GSM1930761 1 processed data MCF10A_INPUT.ucsc.bedGraph.gz processed data MCF10A_BRG1_peaks.bed Mammary epithelial cell line MCF-10A wildtype BRG1 ChIPseq Replicate2 Input MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-5 ArrayExpress GSM1930761 extract 1 Illumina HiSeq 2000 ChIP genomic ChIP-Seq genomic DNA GSM1930761 SRX1420583 Illumina HiSeq 2000 (Homo sapiens) sequencing assay GSM1930760 1 processed data MCF10A_BRG1_CHIP.ucsc.bedGraph.gz processed data MCF10A_BRG1_peaks.bed Mammary epithelial cell line MCF-10A wildtype BRG1 ChIPseq Replicate1 Pulldown MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-5 ArrayExpress GSM1930760 extract 1 Illumina HiSeq 2000 ChIP genomic ChIP-Seq genomic DNA GSM1930760 SRX1420582 Illumina HiSeq 2000 (Homo sapiens) sequencing assay GSM1930759 1 processed data MCF10A_INPUT.ucsc.bedGraph.gz processed data MCF10A_BRG1_peaks.bed Mammary epithelial cell line MCF-10A wildtype BRG1 ChIPseq Replicate1 Input MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-5 ArrayExpress GSM1930759 extract 1 Illumina HiSeq 2000 ChIP genomic ChIP-Seq genomic DNA GSM1930759 SRX1420581 Illumina HiSeq 2000 (Homo sapiens) sequencing assay GSM1930758 1 processed data genes_expression_expected_count.tsv processed data shBRG1_over_shSCRAM_SignificantlyExpressedGenes.csv Mammary epithelial cell line MCF-10A shBRG1 polyA RNA-seq Replicate2 MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-4 ArrayExpress GSM1930758 extract 1 Illumina HiSeq 2000 cDNA transcriptomic RNA-Seq total RNA GSM1930758 SRX1420580 Illumina HiSeq 2000 (Homo sapiens) sequencing assay GSM1930757 1 processed data genes_expression_expected_count.tsv processed data shBRG1_over_shSCRAM_SignificantlyExpressedGenes.csv Mammary epithelial cell line MCF-10A shBRG1 polyA RNA-seq Replicate1 MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-4 ArrayExpress GSM1930757 extract 1 Illumina HiSeq 2000 cDNA transcriptomic RNA-Seq total RNA GSM1930757 SRX1420579 Illumina HiSeq 2000 (Homo sapiens) sequencing assay GSM1930756 1 processed data genes_expression_expected_count.tsv processed data shBRG1_over_shSCRAM_SignificantlyExpressedGenes.csv Mammary epithelial cell line MCF-10A shSCRAM polyA RNA-seq Replicate2 MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-4 ArrayExpress GSM1930756 extract 1 Illumina HiSeq 2000 cDNA transcriptomic RNA-Seq total RNA GSM1930756 SRX1420578 Illumina HiSeq 2000 (Homo sapiens) sequencing assay GSM1930755 1 processed data genes_expression_expected_count.tsv processed data shBRG1_over_shSCRAM_SignificantlyExpressedGenes.csv Mammary epithelial cell line MCF-10A shSCRAM polyA RNA-seq Replicate1 MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-4 ArrayExpress GSM1930755 extract 1 Illumina HiSeq 2000 cDNA transcriptomic RNA-Seq total RNA GSM1930755 SRX1420577 Illumina HiSeq 2000 (Homo sapiens) sequencing assay GSM1930754 1 processed data shSCRAM_shBRG1_processed_HiC_files.tar.gz Mammary epithelial cell line MCF-10A shBRG1 Hi-C Replicate2 MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-3 ArrayExpress GSM1930754 extract 1 Illumina HiSeq 2000 other genomic OTHER genomic DNA GSM1930754 SRX1420576 Illumina HiSeq 2000 (Homo sapiens) sequencing assay GSM1930753 1 processed data shSCRAM_shBRG1_processed_HiC_files.tar.gz Mammary epithelial cell line MCF-10A shBRG1 Hi-C Replicate1 MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-3 ArrayExpress GSM1930753 extract 1 Illumina HiSeq 2000 other genomic OTHER genomic DNA GSM1930753 SRX1420575 Illumina HiSeq 2000 (Homo sapiens) sequencing assay GSM1930752 1 processed data shSCRAM_shBRG1_processed_HiC_files.tar.gz Mammary epithelial cell line MCF-10A shSCRAM Hi-C Replicate2 MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-3 ArrayExpress GSM1930752 extract 1 Illumina HiSeq 2000 other genomic OTHER genomic DNA GSM1930752 SRX1420574 Illumina HiSeq 2000 (Homo sapiens) sequencing assay GSM1930751 1 processed data shSCRAM_shBRG1_processed_HiC_files.tar.gz Mammary epithelial cell line MCF-10A shSCRAM Hi-C Replicate1 MCF-10A Mammary epithelial cell line Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE74716-1 ArrayExpress P-GSE74716-2 ArrayExpress P-GSE74716-3 ArrayExpress GSM1930751 extract 1 Illumina HiSeq 2000 other genomic OTHER genomic DNA GSM1930751 SRX1420573 Illumina HiSeq 2000 (Homo sapiens) sequencing assay