Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [genotype]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [strain]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [genotype]	FactorValue [treatment]
GSM1716136 1	S. aureus rho mutant grown in RPMI medium_4h stationary phase	Staphylococcus aureus_rho mutant	delta rho_RPMI-t4_rep2	delta rho	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716136 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716136 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716136	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716136_543078A02_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.1.zip	P-GSE70041-1	ArrayExpress	GSM1716136_sample_table.txt norm	GSM1716136_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	delta rho	grown in RPMI medium_4h stationary phase
GSM1716135 1	S. aureus rho mutant grown in RPMI medium_4h stationary phase	Staphylococcus aureus_rho mutant	delta rho_RPMI-t4_rep1	delta rho	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716135 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716135 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716135	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716135_543107A03_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.1.zip	P-GSE70041-1	ArrayExpress	GSM1716135_sample_table.txt norm	GSM1716135_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	delta rho	grown in RPMI medium_4h stationary phase
GSM1716134 1	S. aureus wild type grown in RPMI medium_4h stationary phase	Staphylococcus aureus_wild type	wild type_RPMI-t4_rep2	wild type	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716134 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716134 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716134	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716134_543107A02_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.1.zip	P-GSE70041-1	ArrayExpress	GSM1716134_sample_table.txt norm	GSM1716134_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	wild type	grown in RPMI medium_4h stationary phase
GSM1716133 1	S. aureus wild type grown in RPMI medium_4h stationary phase	Staphylococcus aureus_wild type	wild type_RPMI-t4_rep1	wild type	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716133 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716133 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716133	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716133_543107A01_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.1.zip	P-GSE70041-1	ArrayExpress	GSM1716133_sample_table.txt norm	GSM1716133_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	wild type	grown in RPMI medium_4h stationary phase
GSM1716132 1	S. aureus rho mutant grown in RPMI medium_exponential phase	Staphylococcus aureus_rho mutant	delta rho_RPMI-exp_rep2	delta rho	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716132 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716132 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716132	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716132_543099A03_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.1.zip	P-GSE70041-1	ArrayExpress	GSM1716132_sample_table.txt norm	GSM1716132_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	delta rho	grown in RPMI medium_exponential phase
GSM1716131 1	S. aureus rho mutant grown in RPMI medium_exponential phase	Staphylococcus aureus_rho mutant	delta rho_RPMI-exp_rep1	delta rho	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716131 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716131 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716131	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716131_543099A02_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.1.zip	P-GSE70041-1	ArrayExpress	GSM1716131_sample_table.txt norm	GSM1716131_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	delta rho	grown in RPMI medium_exponential phase
GSM1716130 1	S. aureus wild type grown in RPMI medium_exponential phase	Staphylococcus aureus_wild type	wild type_RPMI-exp_rep2	wild type	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716130 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716130 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716130	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716130_543099A01_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.1.zip	P-GSE70041-1	ArrayExpress	GSM1716130_sample_table.txt norm	GSM1716130_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	wild type	grown in RPMI medium_exponential phase
GSM1716129 1	S. aureus wild type grown in RPMI medium_exponential phase	Staphylococcus aureus_wild type	wild type_RPMI-exp_rep1	wild type	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716129 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716129 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716129	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716129_543098A03_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.2.zip	P-GSE70041-1	ArrayExpress	GSM1716129_sample_table.txt norm	GSM1716129_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	wild type	grown in RPMI medium_exponential phase
GSM1716128 1	S. aureus rho mutant grown in TSB medium_4h stationary phase	Staphylococcus aureus_rho mutant	delta rho_TSB-t4_rep2	delta rho	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716128 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716128 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716128	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716128_543098A02_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.2.zip	P-GSE70041-1	ArrayExpress	GSM1716128_sample_table.txt norm	GSM1716128_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	delta rho	grown in TSB medium_4h stationary phase
GSM1716127 1	S. aureus rho mutant grown in TSB medium_4h stationary phase	Staphylococcus aureus_rho mutant	delta rho_TSB-t4_rep1	delta rho	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716127 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716127 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716127	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716127_543098A01_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.2.zip	P-GSE70041-1	ArrayExpress	GSM1716127_sample_table.txt norm	GSM1716127_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	delta rho	grown in TSB medium_4h stationary phase
GSM1716126 1	S. aureus wild type grown in TSB medium_4h stationary phase	Staphylococcus aureus_wild type	wild type_TSB-t4_rep2	wild type	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716126 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716126 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716126	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716126_543097A03_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.2.zip	P-GSE70041-1	ArrayExpress	GSM1716126_sample_table.txt norm	GSM1716126_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	wild type	grown in TSB medium_4h stationary phase
GSM1716125 1	S. aureus wild type grown in TSB medium_4h stationary phase	Staphylococcus aureus_wild type	wild type_TSB-t4_rep1	wild type	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716125 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716125 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716125	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716125_543097A02_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.2.zip	P-GSE70041-1	ArrayExpress	GSM1716125_sample_table.txt norm	GSM1716125_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	wild type	grown in TSB medium_4h stationary phase
GSM1716124 1	S. aureus rho mutant grown in TSB medium_exponential phase	Staphylococcus aureus_rho mutant	delta rho_TSB-exp_rep2	delta rho	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716124 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716124 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716124	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716124_543097A01_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.2.zip	P-GSE70041-1	ArrayExpress	GSM1716124_sample_table.txt norm	GSM1716124_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	delta rho	grown in TSB medium_exponential phase
GSM1716123 1	S. aureus rho mutant grown in TSB medium_exponential phase	Staphylococcus aureus_rho mutant	delta rho_TSB-exp_rep1	delta rho	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716123 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716123 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716123	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716123_543108A03_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.2.zip	P-GSE70041-1	ArrayExpress	GSM1716123_sample_table.txt norm	GSM1716123_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	delta rho	grown in TSB medium_exponential phase
GSM1716122 1	S. aureus wild type grown in TSB medium_exponential phase	Staphylococcus aureus_wild type	wild type_TSB-exp_rep2	wild type	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716122 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716122 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716122	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716122_543108A02_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.2.zip	P-GSE70041-1	ArrayExpress	GSM1716122_sample_table.txt norm	GSM1716122_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	wild type	grown in TSB medium_exponential phase
GSM1716121 1	S. aureus wild type grown in TSB medium_exponential phase	Staphylococcus aureus_wild type	wild type_TSB-exp_rep1	wild type	Staphylococcus aureus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1280	HG001	P-GSE70041-2	ArrayExpress	P-GSE70041-3	ArrayExpress	GSM1716121 extract 1	total RNA	P-GSE70041-4	ArrayExpress	GSM1716121 LE 1	Cy3	P-GSE70041-5	ArrayExpress	GSM1716121	A-GEOD-20587	ArrayExpress	array assay	P-GSE70041-6	ArrayExpress	GSM1716121_543108A01_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.raw.3.zip	P-GSE70041-1	ArrayExpress	GSM1716121_sample_table.txt norm	GSM1716121_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-70041/E-GEOD-70041.processed.1.zip	wild type	grown in TSB medium_exponential phase