Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [age]	Characteristics [cultivar]	Term Source REF	Term Accession Number	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [organism part]	Term Source REF	Term Accession Number	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]
GSM1532919 1	Gene expression data from roots of 3-week-old seedlings co-cultivated with A. tumefaciens C58 for eight hours in a hydroponic system.	Arabidopsis thaliana (3-week-old seedlings) inoculated	Cocultivation at 8 hrs, biological rep2_leaf	3-week-old Arabidopsis thaliana Col-0 seedlings	Col-0	EFO	EFO_0005148	Arabidopsis thaliana	EFO	http://purl.obolibrary.org/obo/NCBITaxon_3702	leaf	EFO	EFO_0000993	P-GSE62749-2	ArrayExpress	P-GSE62749-3	ArrayExpress	P-GSE62749-4	ArrayExpress	GSM1532919 extract 1	total RNA	P-GSE62749-5	ArrayExpress	GSM1532919 LE 1	biotin	P-GSE62749-6	ArrayExpress	GSM1532919	A-AFFY-2	ArrayExpress	array assay	P-GSE62749-7	ArrayExpress	GSM1532919_AFFY1724.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-62749/E-GEOD-62749.raw.1.zip	P-GSE62749-1	ArrayExpress	GSM1532919_sample_table.txt norm	GSM1532919_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-62749/E-GEOD-62749.processed.1.zip
GSM1532918 1	Gene expression data from roots of 3-week-old seedlings co-cultivated with A. tumefaciens C58 for eight hours in a hydroponic system.	Arabidopsis thaliana (3-week-old seedlings) inoculated	Cocultivation at 8 hrs, biological rep1_leaf	3-week-old Arabidopsis thaliana Col-0 seedlings	Col-0	EFO	EFO_0005148	Arabidopsis thaliana	EFO	http://purl.obolibrary.org/obo/NCBITaxon_3702	leaf	EFO	EFO_0000993	P-GSE62749-2	ArrayExpress	P-GSE62749-3	ArrayExpress	P-GSE62749-4	ArrayExpress	GSM1532918 extract 1	total RNA	P-GSE62749-5	ArrayExpress	GSM1532918 LE 1	biotin	P-GSE62749-6	ArrayExpress	GSM1532918	A-AFFY-2	ArrayExpress	array assay	P-GSE62749-7	ArrayExpress	GSM1532918_AFFY1723.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-62749/E-GEOD-62749.raw.1.zip	P-GSE62749-1	ArrayExpress	GSM1532918_sample_table.txt norm	GSM1532918_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-62749/E-GEOD-62749.processed.1.zip
GSM1532917 1	Gene expression data from roots of 3-week-old seedlings co-cultivated with A. tumefaciens C58 for eight hours in a hydroponic system.	Arabidopsis thaliana (3-week-old seedlings) mock inoculated	Mock cocultivation at 8 hrs, biological rep2_leaf	3-week-old Arabidopsis thaliana Col-0 seedlings	Col-0	EFO	EFO_0005148	Arabidopsis thaliana	EFO	http://purl.obolibrary.org/obo/NCBITaxon_3702	leaf	EFO	EFO_0000993	P-GSE62749-2	ArrayExpress	P-GSE62749-3	ArrayExpress	P-GSE62749-4	ArrayExpress	GSM1532917 extract 1	total RNA	P-GSE62749-5	ArrayExpress	GSM1532917 LE 1	biotin	P-GSE62749-6	ArrayExpress	GSM1532917	A-AFFY-2	ArrayExpress	array assay	P-GSE62749-7	ArrayExpress	GSM1532917_AFFY1722.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-62749/E-GEOD-62749.raw.1.zip	P-GSE62749-1	ArrayExpress	GSM1532917_sample_table.txt norm	GSM1532917_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-62749/E-GEOD-62749.processed.1.zip
GSM1532916 1	Gene expression data from roots of 3-week-old seedlings co-cultivated with A. tumefaciens C58 for eight hours in a hydroponic system.	Arabidopsis thaliana (3-week-old seedlings) mock inoculated	Mock cocultivation at 8 hrs, biological rep1_leaf	3-week-old Arabidopsis thaliana Col-0 seedlings	Col-0	EFO	EFO_0005148	Arabidopsis thaliana	EFO	http://purl.obolibrary.org/obo/NCBITaxon_3702	leaf	EFO	EFO_0000993	P-GSE62749-2	ArrayExpress	P-GSE62749-3	ArrayExpress	P-GSE62749-4	ArrayExpress	GSM1532916 extract 1	total RNA	P-GSE62749-5	ArrayExpress	GSM1532916 LE 1	biotin	P-GSE62749-6	ArrayExpress	GSM1532916	A-AFFY-2	ArrayExpress	array assay	P-GSE62749-7	ArrayExpress	GSM1532916_AFFY1721.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-62749/E-GEOD-62749.raw.1.zip	P-GSE62749-1	ArrayExpress	GSM1532916_sample_table.txt norm	GSM1532916_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-62749/E-GEOD-62749.processed.1.zip