Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [cell type] Characteristics [growth condition] Term Source REF Term Accession Number Characteristics [organism] Term Source REF Term Accession Number Characteristics [primary cell culture] Characteristics [strain] Term Source REF Term Accession Number Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [GROWTH CONDITION] Term Source REF Term Accession Number GSM1402442 1 Biological replicate 1: OCP1; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_1.txt Biological replicate 2: OCP2; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_2.txt Biological replicate 3: OCP3; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_3.txt Biological replicate 4: OCP4; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_4.txt Mouse myeloid blasts Primed for 4 days with M-CSF and 1 day M-CSF + RANKL Myeloid blasts bone EFO EFO_0000298 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Primary bone marrow cell isolate C57BL/6 EFO EFO_0004472 P-GSE58146-2 ArrayExpress P-GSE58146-3 ArrayExpress P-GSE58146-4 ArrayExpress GSM1402442 extract 1 total RNA P-GSE58146-5 ArrayExpress GSM1402442 LE 1 Cy3, Cy5 P-GSE58146-6 ArrayExpress GSM1402442 A-MEXP-724 ArrayExpress array assay P-GSE58146-7 ArrayExpress GSM1402442_US22502676_251486816096_S01_GE2_105_Dec08_1_4.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.raw.1.zip P-GSE58146-1 ArrayExpress GSM1402442_sample_table.txt norm GSM1402442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.processed.1.zip bone EFO EFO_0000298 GSM1402442 1 Biological replicate 1: OCP1; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_1.txt Biological replicate 2: OCP2; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_2.txt Biological replicate 3: OCP3; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_3.txt Biological replicate 4: OCP4; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_4.txt Mouse myeloid blasts Primed for 4 days with M-CSF and 1 day M-CSF + RANKL Myeloid blasts bone EFO EFO_0000298 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Primary bone marrow cell isolate C57BL/6 EFO EFO_0004472 P-GSE58146-2 ArrayExpress P-GSE58146-3 ArrayExpress P-GSE58146-4 ArrayExpress GSM1402442 extract 1 total RNA P-GSE58146-5 ArrayExpress GSM1402442 LE 1 Cy3, Cy5 P-GSE58146-6 ArrayExpress GSM1402442 A-MEXP-724 ArrayExpress array assay P-GSE58146-7 ArrayExpress GSM1402442_US22502676_251486816096_S01_GE2_105_Dec08_1_3.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.raw.1.zip P-GSE58146-1 ArrayExpress GSM1402442_sample_table.txt norm GSM1402442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.processed.1.zip bone EFO EFO_0000298 GSM1402442 1 Biological replicate 1: OCP1; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_1.txt Biological replicate 2: OCP2; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_2.txt Biological replicate 3: OCP3; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_3.txt Biological replicate 4: OCP4; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_4.txt Mouse myeloid blasts Primed for 4 days with M-CSF and 1 day M-CSF + RANKL Myeloid blasts bone EFO EFO_0000298 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Primary bone marrow cell isolate C57BL/6 EFO EFO_0004472 P-GSE58146-2 ArrayExpress P-GSE58146-3 ArrayExpress P-GSE58146-4 ArrayExpress GSM1402442 extract 1 total RNA P-GSE58146-5 ArrayExpress GSM1402442 LE 1 Cy3, Cy5 P-GSE58146-6 ArrayExpress GSM1402442 A-MEXP-724 ArrayExpress array assay P-GSE58146-7 ArrayExpress GSM1402442_US22502676_251486816096_S01_GE2_105_Dec08_1_2.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.raw.1.zip P-GSE58146-1 ArrayExpress GSM1402442_sample_table.txt norm GSM1402442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.processed.1.zip bone EFO EFO_0000298 GSM1402442 1 Biological replicate 1: OCP1; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_1.txt Biological replicate 2: OCP2; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_2.txt Biological replicate 3: OCP3; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_3.txt Biological replicate 4: OCP4; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_4.txt Mouse myeloid blasts Primed for 4 days with M-CSF and 1 day M-CSF + RANKL Myeloid blasts bone EFO EFO_0000298 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Primary bone marrow cell isolate C57BL/6 EFO EFO_0004472 P-GSE58146-2 ArrayExpress P-GSE58146-3 ArrayExpress P-GSE58146-4 ArrayExpress GSM1402442 extract 1 total RNA P-GSE58146-5 ArrayExpress GSM1402442 LE 1 Cy3, Cy5 P-GSE58146-6 ArrayExpress GSM1402442 A-MEXP-724 ArrayExpress array assay P-GSE58146-7 ArrayExpress GSM1402442_US22502676_251486816096_S01_GE2_105_Dec08_1_1.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.raw.1.zip P-GSE58146-1 ArrayExpress GSM1402442_sample_table.txt norm GSM1402442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.processed.1.zip bone EFO EFO_0000298 GSM1402442 2 Biological replicate 1: OCP1; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_1.txt Biological replicate 2: OCP2; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_2.txt Biological replicate 3: OCP3; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_3.txt Biological replicate 4: OCP4; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_4.txt Mouse myeloid blasts Primed for 4 days with M-CSF and 1 day M-CSF + RANKL Myeloid blasts Plastic Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Primary bone marrow cell isolate C57BL/6 EFO EFO_0004472 P-GSE58146-2 ArrayExpress P-GSE58146-3 ArrayExpress P-GSE58146-4 ArrayExpress GSM1402442 extract 2 total RNA P-GSE58146-5 ArrayExpress GSM1402442 LE 2 Cy3, Cy5 P-GSE58146-6 ArrayExpress GSM1402442 A-MEXP-724 ArrayExpress array assay P-GSE58146-7 ArrayExpress GSM1402442_US22502676_251486816096_S01_GE2_105_Dec08_1_4.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.raw.1.zip P-GSE58146-1 ArrayExpress GSM1402442_sample_table.txt norm GSM1402442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.processed.1.zip Plastic GSM1402442 2 Biological replicate 1: OCP1; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_1.txt Biological replicate 2: OCP2; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_2.txt Biological replicate 3: OCP3; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_3.txt Biological replicate 4: OCP4; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_4.txt Mouse myeloid blasts Primed for 4 days with M-CSF and 1 day M-CSF + RANKL Myeloid blasts Plastic Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Primary bone marrow cell isolate C57BL/6 EFO EFO_0004472 P-GSE58146-2 ArrayExpress P-GSE58146-3 ArrayExpress P-GSE58146-4 ArrayExpress GSM1402442 extract 2 total RNA P-GSE58146-5 ArrayExpress GSM1402442 LE 2 Cy3, Cy5 P-GSE58146-6 ArrayExpress GSM1402442 A-MEXP-724 ArrayExpress array assay P-GSE58146-7 ArrayExpress GSM1402442_US22502676_251486816096_S01_GE2_105_Dec08_1_3.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.raw.1.zip P-GSE58146-1 ArrayExpress GSM1402442_sample_table.txt norm GSM1402442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.processed.1.zip Plastic GSM1402442 2 Biological replicate 1: OCP1; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_1.txt Biological replicate 2: OCP2; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_2.txt Biological replicate 3: OCP3; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_3.txt Biological replicate 4: OCP4; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_4.txt Mouse myeloid blasts Primed for 4 days with M-CSF and 1 day M-CSF + RANKL Myeloid blasts Plastic Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Primary bone marrow cell isolate C57BL/6 EFO EFO_0004472 P-GSE58146-2 ArrayExpress P-GSE58146-3 ArrayExpress P-GSE58146-4 ArrayExpress GSM1402442 extract 2 total RNA P-GSE58146-5 ArrayExpress GSM1402442 LE 2 Cy3, Cy5 P-GSE58146-6 ArrayExpress GSM1402442 A-MEXP-724 ArrayExpress array assay P-GSE58146-7 ArrayExpress GSM1402442_US22502676_251486816096_S01_GE2_105_Dec08_1_2.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.raw.1.zip P-GSE58146-1 ArrayExpress GSM1402442_sample_table.txt norm GSM1402442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.processed.1.zip Plastic GSM1402442 2 Biological replicate 1: OCP1; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_1.txt Biological replicate 2: OCP2; boneCy3 plasticCy5; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_2.txt Biological replicate 3: OCP3; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_3.txt Biological replicate 4: OCP4; boneCy5 plasticCy3; raw data US22502676_251486816096_S01_GE2_105_Dec08_1_4.txt Mouse myeloid blasts Primed for 4 days with M-CSF and 1 day M-CSF + RANKL Myeloid blasts Plastic Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Primary bone marrow cell isolate C57BL/6 EFO EFO_0004472 P-GSE58146-2 ArrayExpress P-GSE58146-3 ArrayExpress P-GSE58146-4 ArrayExpress GSM1402442 extract 2 total RNA P-GSE58146-5 ArrayExpress GSM1402442 LE 2 Cy3, Cy5 P-GSE58146-6 ArrayExpress GSM1402442 A-MEXP-724 ArrayExpress array assay P-GSE58146-7 ArrayExpress GSM1402442_US22502676_251486816096_S01_GE2_105_Dec08_1_1.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.raw.1.zip P-GSE58146-1 ArrayExpress GSM1402442_sample_table.txt norm GSM1402442_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-58146/E-GEOD-58146.processed.1.zip Plastic