Source Name	Characteristics [Organism]	Term Source REF	Term Accession Number	Characteristics [CellLine]	Term Source REF	Term Accession Number	Description	Sample Name	Extract Name	Material Type	Labeled Extract Name	Label	Material Type	Hybridization Name	Array Design REF	Factor Value [Compound]	Term Source REF	Term Accession Number	Factor Value [Time]	Unit [TimeUnit]	Scan Name	Derived Array Data Matrix File	Comment [Derived ArrayExpress FTP file]
GSE6431GSM8702	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with nocodazole and collected @0 hours.	GSE6431GSM8702 sample	GSE6431GSM8702 extract	total_RNA	GSE6431GSM8702 LE.biotin	biotin	synthetic_RNA	eTat - Noco0hr - 1	A-AFFY-1	nocodazole	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:34892	0	h	eTat - Noco0hr - 1	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8699	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with hydroxyurea and collected @6 hours.	GSE6431GSM8699 sample	GSE6431GSM8699 extract	total_RNA	GSE6431GSM8699 LE.biotin	biotin	synthetic_RNA	eTat - Hu6hr - 2	A-AFFY-1	hydroxyurea	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:44423	6	h	eTat - Hu6hr - 2	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8696	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with hydroxyurea and collected @3 hours.	GSE6431GSM8696 sample	GSE6431GSM8696 extract	total_RNA	GSE6431GSM8696 LE.biotin	biotin	synthetic_RNA	eTat - Hu3hr - 1	A-AFFY-1	hydroxyurea	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:44423	3	h	eTat - Hu3hr - 1	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8709	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with nocodazole and collected @9 hours.	GSE6431GSM8709 sample	GSE6431GSM8709 extract	total_RNA	GSE6431GSM8709 LE.biotin	biotin	synthetic_RNA	eTat - Noco9hr - 2	A-AFFY-1	nocodazole	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:34892	9	h	eTat - Noco9hr - 2	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8695	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with hydroxyurea and collected @0 hours.	GSE6431GSM8695 sample	GSE6431GSM8695 extract	total_RNA	GSE6431GSM8695 LE.biotin	biotin	synthetic_RNA	eTat - Hu0hr - 2	A-AFFY-1	hydroxyurea	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:44423	0	h	eTat - Hu0hr - 2	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8703	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with nocodazole and collected @0 hours.	GSE6431GSM8703 sample	GSE6431GSM8703 extract	total_RNA	GSE6431GSM8703 LE.biotin	biotin	synthetic_RNA	eTat - Noco0hr - 2	A-AFFY-1	nocodazole	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:34892	0	h	eTat - Noco0hr - 2	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8707	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with nocodazole and collected @6 hours.	GSE6431GSM8707 sample	GSE6431GSM8707 extract	total_RNA	GSE6431GSM8707 LE.biotin	biotin	synthetic_RNA	eTat - Noco6hr - 2	A-AFFY-1	nocodazole	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:34892	6	h	eTat - Noco6hr - 2	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8697	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with hydroxyurea and collected @3 hours.	GSE6431GSM8697 sample	GSE6431GSM8697 extract	total_RNA	GSE6431GSM8697 LE.biotin	biotin	synthetic_RNA	eTat - Hu3hr - 2	A-AFFY-1	hydroxyurea	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:44423	3	h	eTat - Hu3hr - 2	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8705	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with nocodazole and collected @3 hours.	GSE6431GSM8705 sample	GSE6431GSM8705 extract	total_RNA	GSE6431GSM8705 LE.biotin	biotin	synthetic_RNA	eTat - Noco3hr - 2	A-AFFY-1	nocodazole	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:34892	3	h	eTat - Noco3hr - 2	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8698	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with hydroxyurea and collected @6 hours.	GSE6431GSM8698 sample	GSE6431GSM8698 extract	total_RNA	GSE6431GSM8698 LE.biotin	biotin	synthetic_RNA	eTat - Hu6hr - 1	A-AFFY-1	hydroxyurea	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:44423	6	h	eTat - Hu6hr - 1	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8708	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with nocodazole and collected @9 hours.	GSE6431GSM8708 sample	GSE6431GSM8708 extract	total_RNA	GSE6431GSM8708 LE.biotin	biotin	synthetic_RNA	eTat - Noco9hr - 1	A-AFFY-1	nocodazole	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:34892	9	h	eTat - Noco9hr - 1	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8704	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with nocodazole and collected @3 hours.	GSE6431GSM8704 sample	GSE6431GSM8704 extract	total_RNA	GSE6431GSM8704 LE.biotin	biotin	synthetic_RNA	eTat - Noco3hr - 1	A-AFFY-1	nocodazole	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:34892	3	h	eTat - Noco3hr - 1	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8694	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin.  Cells were treated with hydroxyurea and collected @0 hours.	GSE6431GSM8694 sample	GSE6431GSM8694 extract	total_RNA	GSE6431GSM8694 LE.biotin	biotin	synthetic_RNA	eTat - Hu0hr - 1	A-AFFY-1	hydroxyurea	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:44423	0	h	eTat - Hu0hr - 1	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8700	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with hydroxyurea and collected @9 hours.	GSE6431GSM8700 sample	GSE6431GSM8700 extract	total_RNA	GSE6431GSM8700 LE.biotin	biotin	synthetic_RNA	eTat - Hu9hr - 1	A-AFFY-1	hydroxyurea	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:44423	9	h	eTat - Hu9hr - 1	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8701	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with hydroxyurea and collected @9 hours.	GSE6431GSM8701 sample	GSE6431GSM8701 extract	total_RNA	GSE6431GSM8701 LE.biotin	biotin	synthetic_RNA	eTat - Hu9hr - 2	A-AFFY-1	hydroxyurea	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:44423	9	h	eTat - Hu9hr - 2	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip
GSE6431GSM8706	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	HeLa	EFO	EFO_0001185	HeLa CD4+ cells were transfected with an epitope-tagged eTat plasmid and selected with hygromycin. Cells were treated with nocodazole and collected @6 hours.	GSE6431GSM8706 sample	GSE6431GSM8706 extract	total_RNA	GSE6431GSM8706 LE.biotin	biotin	synthetic_RNA	eTat - Noco6hr - 1	A-AFFY-1	nocodazole	EFO	http://www.ebi.ac.uk/chebi/searchId.do;?chebiId=CHEBI:34892	6	h	eTat - Noco6hr - 1	E-GEOD-571-processed-data-1502768294.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-571/E-GEOD-571.processed.1.zip