Source Name	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics[developmental stage]	Characteristics [organism part]	Material Type	Characteristics[infect]	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	Factor Value[infect]
GSM1359955 1	4 dpf dissected larval zebrafish trunks injected at 2 dpf with live Salmonella enterica serovar Typhimurium bacteria	infected embryo: biological replicate 3	Danio rerio	EFO	http://purl.obolibrary.org/obo/NCBITaxon_7955	embryo 4 days post fertilisation	larval trunks	organism part	Salmonella enterica subsp. enterica serovar Typhimurium	P-GSE56365-2	ArrayExpress	GSM1359955 extract 1	total RNA	P-GSE56365-3	ArrayExpress	GSM1359955 LE 1	biotin	P-GSE56365-4	ArrayExpress	GSM1359955	A-AFFY-38	ArrayExpress	array assay	P-GSE56365-5	ArrayExpress	GSM1359955_CH0006_Zebrafish_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.raw.1.zip	P-GSE56365-1	ArrayExpress	GSM1359955_sample_table.txt norm	GSM1359955_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.processed.1.zip	Salmonella enterica subsp. enterica serovar Typhimurium
GSM1359954 1	4 dpf dissected larval zebrafish trunks injected at 2 dpf with PBS	control embryo: biological replicate 3	Danio rerio	EFO	http://purl.obolibrary.org/obo/NCBITaxon_7955	embryo 4 days post fertilisation	larval trunks	organism part	none	P-GSE56365-2	ArrayExpress	GSM1359954 extract 1	total RNA	P-GSE56365-3	ArrayExpress	GSM1359954 LE 1	biotin	P-GSE56365-4	ArrayExpress	GSM1359954	A-AFFY-38	ArrayExpress	array assay	P-GSE56365-5	ArrayExpress	GSM1359954_CH0005_Zebrafish_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.raw.1.zip	P-GSE56365-1	ArrayExpress	GSM1359954_sample_table.txt norm	GSM1359954_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.processed.1.zip	none
GSM1359953 1	4 dpf dissected larval zebrafish trunks injected at 2 dpf with live Salmonella enterica serovar Typhimurium bacteria	infected embryo: biological replicate 2	Danio rerio	EFO	http://purl.obolibrary.org/obo/NCBITaxon_7955	embryo 4 days post fertilisation	larval trunks	organism part	Salmonella enterica subsp. enterica serovar Typhimurium	P-GSE56365-2	ArrayExpress	GSM1359953 extract 1	total RNA	P-GSE56365-3	ArrayExpress	GSM1359953 LE 1	biotin	P-GSE56365-4	ArrayExpress	GSM1359953	A-AFFY-38	ArrayExpress	array assay	P-GSE56365-5	ArrayExpress	GSM1359953_CH0004_Zebrafish_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.raw.1.zip	P-GSE56365-1	ArrayExpress	GSM1359953_sample_table.txt norm	GSM1359953_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.processed.1.zip	Salmonella enterica subsp. enterica serovar Typhimurium
GSM1359952 1	4 dpf dissected larval zebrafish trunks injected at 2 dpf with PBS	control embryo: biological replicate 2	Danio rerio	EFO	http://purl.obolibrary.org/obo/NCBITaxon_7955	embryo 4 days post fertilisation	larval trunks	organism part	none	P-GSE56365-2	ArrayExpress	GSM1359952 extract 1	total RNA	P-GSE56365-3	ArrayExpress	GSM1359952 LE 1	biotin	P-GSE56365-4	ArrayExpress	GSM1359952	A-AFFY-38	ArrayExpress	array assay	P-GSE56365-5	ArrayExpress	GSM1359952_CH0003_Zebrafish_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.raw.1.zip	P-GSE56365-1	ArrayExpress	GSM1359952_sample_table.txt norm	GSM1359952_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.processed.1.zip	none
GSM1359951 1	4 dpf dissected larval zebrafish trunks injected at 2 dpf with live Salmonella enterica serovar Typhimurium bacteria	infected embryo: biological replicate 1	Danio rerio	EFO	http://purl.obolibrary.org/obo/NCBITaxon_7955	embryo 4 days post fertilisation	larval trunks	organism part	Salmonella enterica subsp. enterica serovar Typhimurium	P-GSE56365-2	ArrayExpress	GSM1359951 extract 1	total RNA	P-GSE56365-3	ArrayExpress	GSM1359951 LE 1	biotin	P-GSE56365-4	ArrayExpress	GSM1359951	A-AFFY-38	ArrayExpress	array assay	P-GSE56365-5	ArrayExpress	GSM1359951_CH0002_Zebrafish_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.raw.1.zip	P-GSE56365-1	ArrayExpress	GSM1359951_sample_table.txt norm	GSM1359951_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.processed.1.zip	Salmonella enterica subsp. enterica serovar Typhimurium
GSM1359950 1	4 dpf dissected larval zebrafish trunks injected at 2 dpf with PBS	control embryo: biological replicate 1	Danio rerio	EFO	http://purl.obolibrary.org/obo/NCBITaxon_7955	embryo 4 days post fertilisation	larval trunks	organism part	none	P-GSE56365-2	ArrayExpress	GSM1359950 extract 1	total RNA	P-GSE56365-3	ArrayExpress	GSM1359950 LE 1	biotin	P-GSE56365-4	ArrayExpress	GSM1359950	A-AFFY-38	ArrayExpress	array assay	P-GSE56365-5	ArrayExpress	GSM1359950_CH0001_Zebrafish_.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.raw.1.zip	P-GSE56365-1	ArrayExpress	GSM1359950_sample_table.txt norm	GSM1359950_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-56365/E-GEOD-56365.processed.1.zip	none