Source Name	Comment [ENA_SAMPLE]	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [cell type]	Characteristics [genotype]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [strain background]	Protocol REF	Term Source REF	Extract Name	Comment [INSTRUMENT_MODEL]	Comment [LIBRARY_LAYOUT]	Comment [LIBRARY_SELECTION]	Comment [LIBRARY_SOURCE]	Comment [LIBRARY_STRATEGY]	Material Type	Assay Name	Comment [ENA_EXPERIMENT]	Comment [Platform_title]	Technology Type	Protocol REF	Term Source REF	Scan Name	Comment [ENA_RUN]	Comment [FASTQ_URI]	FactorValue [TIME]
GSM1357148 1	SRS582164	Sample 9	KP-KrasA cells_day 21	KrasMD21	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357148 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357148	SRX501071	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204834_2.fastq.gz	SRR1204834	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/004/SRR1204834/SRR1204834_2.fastq.gz	Day 21 (D21)
GSM1357148 1	SRS582164	Sample 9	KP-KrasA cells_day 21	KrasMD21	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357148 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357148	SRX501071	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204834_1.fastq.gz	SRR1204834	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/004/SRR1204834/SRR1204834_1.fastq.gz	Day 21 (D21)
GSM1357147 1	SRS582163	Sample 8	KP-KrasA cells_day 21	KrasGD21	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357147 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357147	SRX501070	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204833_2.fastq.gz	SRR1204833	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/003/SRR1204833/SRR1204833_2.fastq.gz	Day 21 (D21)
GSM1357147 1	SRS582163	Sample 8	KP-KrasA cells_day 21	KrasGD21	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357147 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357147	SRX501070	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204833_1.fastq.gz	SRR1204833	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/003/SRR1204833/SRR1204833_1.fastq.gz	Day 21 (D21)
GSM1357146 1	SRS582162	Sample 7	KP-KrasA cells_day 21	KrasAD21	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357146 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357146	SRX501069	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204832_2.fastq.gz	SRR1204832	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/002/SRR1204832/SRR1204832_2.fastq.gz	Day 21 (D21)
GSM1357146 1	SRS582162	Sample 7	KP-KrasA cells_day 21	KrasAD21	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357146 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357146	SRX501069	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204832_1.fastq.gz	SRR1204832	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/002/SRR1204832/SRR1204832_1.fastq.gz	Day 21 (D21)
GSM1357145 1	SRS582161	Sample 6	KP-KrasA cells_day 4	KrasMD4	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357145 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357145	SRX501068	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204831_2.fastq.gz	SRR1204831	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/001/SRR1204831/SRR1204831_2.fastq.gz	Day 4 (D4
GSM1357145 1	SRS582161	Sample 6	KP-KrasA cells_day 4	KrasMD4	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357145 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357145	SRX501068	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204831_1.fastq.gz	SRR1204831	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/001/SRR1204831/SRR1204831_1.fastq.gz	Day 4 (D4
GSM1357144 1	SRS582160	Sample 5	KP-KrasA cells_day 4	KrasGD4	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357144 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357144	SRX501067	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204830_2.fastq.gz	SRR1204830	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/000/SRR1204830/SRR1204830_2.fastq.gz	Day 4 (D4
GSM1357144 1	SRS582160	Sample 5	KP-KrasA cells_day 4	KrasGD4	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357144 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357144	SRX501067	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204830_1.fastq.gz	SRR1204830	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/000/SRR1204830/SRR1204830_1.fastq.gz	Day 4 (D4
GSM1357143 1	SRS582159	Sample 4	KP-KrasA cells_day 4	KrasAD4	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-4	ArrayExpress	GSM1357143 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357143	SRX501066	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204829_2.fastq.gz	SRR1204829	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/009/SRR1204829/SRR1204829_2.fastq.gz	Day 4 (D4
GSM1357143 1	SRS582159	Sample 4	KP-KrasA cells_day 4	KrasAD4	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-4	ArrayExpress	GSM1357143 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357143	SRX501066	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204829_1.fastq.gz	SRR1204829	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/009/SRR1204829/SRR1204829_1.fastq.gz	Day 4 (D4
GSM1357142 1	SRS582158	Sample 3	KP-KrasA cells_day 0	KrasMD0	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-3	ArrayExpress	GSM1357142 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357142	SRX501065	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204828_2.fastq.gz	SRR1204828	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/008/SRR1204828/SRR1204828_2.fastq.gz	Day 0 (D0)
GSM1357142 1	SRS582158	Sample 3	KP-KrasA cells_day 0	KrasMD0	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-3	ArrayExpress	GSM1357142 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357142	SRX501065	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204828_1.fastq.gz	SRR1204828	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/008/SRR1204828/SRR1204828_1.fastq.gz	Day 0 (D0)
GSM1357141 1	SRS582157	Sample 2	KP-KrasA cells_day 0	KrasGD0	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357141 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357141	SRX501064	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204827_2.fastq.gz	SRR1204827	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/007/SRR1204827/SRR1204827_2.fastq.gz	Day 0 (D0)
GSM1357141 1	SRS582157	Sample 2	KP-KrasA cells_day 0	KrasGD0	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357141 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357141	SRX501064	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204827_1.fastq.gz	SRR1204827	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/007/SRR1204827/SRR1204827_1.fastq.gz	Day 0 (D0)
GSM1357140 1	SRS582156	Sample 1	KP-KrasA cells_day 0	KrasAD0	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357140 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357140	SRX501063	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204826_2.fastq.gz	SRR1204826	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/006/SRR1204826/SRR1204826_2.fastq.gz	Day 0 (D0)
GSM1357140 1	SRS582156	Sample 1	KP-KrasA cells_day 0	KrasAD0	primary lung adenocarcinoma cells	Kras Lox-STOP-Lox-G12D;p53flox/flox (KP) mouse lung cancer model into which  a doxycycline-inducible shRNA targeting Kras was introduced	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	129/SvJae	P-GSE56175-1	ArrayExpress	GSM1357140 extract 1	Illumina HiSeq 2000	PAIRED	cDNA	transcriptomic	RNA-Seq	polyA RNA	GSM1357140	SRX501063	Illumina HiSeq 2000 (Mus musculus)	sequencing assay	P-GSE56175-2	ArrayExpress	SRR1204826_1.fastq.gz	SRR1204826	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR120/006/SRR1204826/SRR1204826_1.fastq.gz	Day 0 (D0)