Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [medip antibody] Characteristics [organism] Term Source REF Term Accession Number Characteristics [organism part] Term Source REF Term Accession Number Characteristics [strain] Term Source REF Term Accession Number Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [COMPOUND] GSM1323646 1 Sample name: 69322505 MeDIP DNA from TMA treated lymph node cells MeDIP DNA from TMA treated lymph node cells Nodes_TMA_T4 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323646 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323646 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323646 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323646_69322505_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.1.zip P-GSE54768-1 ArrayExpress GSM1323646_sample_table.txt norm GSM1323646_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323646 1 Sample name: 69322505 MeDIP DNA from TMA treated lymph node cells MeDIP DNA from TMA treated lymph node cells Nodes_TMA_T4 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323646 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323646 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323646 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323646_69322505_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.1.zip P-GSE54768-1 ArrayExpress GSM1323646_sample_table.txt norm GSM1323646_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323646 2 Sample name: 69322505 MeDIP DNA from TMA treated lymph node cells Input DNA from TMA treated lymph node cells Nodes_TMA_T4 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323646 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323646 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323646 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323646_69322505_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.1.zip P-GSE54768-1 ArrayExpress GSM1323646_sample_table.txt norm GSM1323646_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323646 2 Sample name: 69322505 MeDIP DNA from TMA treated lymph node cells Input DNA from TMA treated lymph node cells Nodes_TMA_T4 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323646 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323646 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323646 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323646_69322505_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.1.zip P-GSE54768-1 ArrayExpress GSM1323646_sample_table.txt norm GSM1323646_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323645 2 Sample name: 69310505 MeDIP DNA from TMA treated lymph node cells Input DNA from TMA treated lymph node cells Nodes_TMA_T5 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323645 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323645 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323645 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323645_69310505_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.2.zip P-GSE54768-1 ArrayExpress GSM1323645_sample_table.txt norm GSM1323645_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323645 2 Sample name: 69310505 MeDIP DNA from TMA treated lymph node cells Input DNA from TMA treated lymph node cells Nodes_TMA_T5 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323645 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323645 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323645 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323645_69310505_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.2.zip P-GSE54768-1 ArrayExpress GSM1323645_sample_table.txt norm GSM1323645_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323645 1 Sample name: 69310505 MeDIP DNA from TMA treated lymph node cells MeDIP DNA from TMA treated lymph node cells Nodes_TMA_T5 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323645 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323645 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323645 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323645_69310505_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.2.zip P-GSE54768-1 ArrayExpress GSM1323645_sample_table.txt norm GSM1323645_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323645 1 Sample name: 69310505 MeDIP DNA from TMA treated lymph node cells MeDIP DNA from TMA treated lymph node cells Nodes_TMA_T5 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323645 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323645 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323645 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323645_69310505_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.2.zip P-GSE54768-1 ArrayExpress GSM1323645_sample_table.txt norm GSM1323645_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323644 1 Sample name: 69310205 MeDIP DNA from AOO treated lymph node cells MeDIP DNA from AOO treated lymph node cells Nodes_AOO_A5 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323644 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323644 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323644 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323644_69310205_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.2.zip P-GSE54768-1 ArrayExpress GSM1323644_sample_table.txt norm GSM1323644_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323644 1 Sample name: 69310205 MeDIP DNA from AOO treated lymph node cells MeDIP DNA from AOO treated lymph node cells Nodes_AOO_A5 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323644 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323644 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323644 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323644_69310205_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.3.zip P-GSE54768-1 ArrayExpress GSM1323644_sample_table.txt norm GSM1323644_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323644 2 Sample name: 69310205 MeDIP DNA from AOO treated lymph node cells Input DNA from AOO treated lymph node cells Nodes_AOO_A5 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323644 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323644 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323644 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323644_69310205_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.2.zip P-GSE54768-1 ArrayExpress GSM1323644_sample_table.txt norm GSM1323644_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323644 2 Sample name: 69310205 MeDIP DNA from AOO treated lymph node cells Input DNA from AOO treated lymph node cells Nodes_AOO_A5 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323644 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323644 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323644 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323644_69310205_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.3.zip P-GSE54768-1 ArrayExpress GSM1323644_sample_table.txt norm GSM1323644_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323643 2 Sample name: 69309905 MeDIP DNA from AOO treated lymph node cells Input DNA from AOO treated lymph node cells Nodes_AOO_A3 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323643 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323643 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323643 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323643_69309905_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.3.zip P-GSE54768-1 ArrayExpress GSM1323643_sample_table.txt norm GSM1323643_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323643 2 Sample name: 69309905 MeDIP DNA from AOO treated lymph node cells Input DNA from AOO treated lymph node cells Nodes_AOO_A3 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323643 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323643 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323643 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323643_69309905_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.3.zip P-GSE54768-1 ArrayExpress GSM1323643_sample_table.txt norm GSM1323643_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323643 1 Sample name: 69309905 MeDIP DNA from AOO treated lymph node cells MeDIP DNA from AOO treated lymph node cells Nodes_AOO_A3 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323643 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323643 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323643 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323643_69309905_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.3.zip P-GSE54768-1 ArrayExpress GSM1323643_sample_table.txt norm GSM1323643_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323643 1 Sample name: 69309905 MeDIP DNA from AOO treated lymph node cells MeDIP DNA from AOO treated lymph node cells Nodes_AOO_A3 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323643 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323643 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323643 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323643_69309905_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.3.zip P-GSE54768-1 ArrayExpress GSM1323643_sample_table.txt norm GSM1323643_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323642 2 Sample name: 69303805 MeDIP DNA from DNCB treated lymph node cells Input DNA from DNCB treated lymph node cells Nodes_DNCB_D5 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323642 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323642 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323642 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323642_69303805_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.4.zip P-GSE54768-1 ArrayExpress GSM1323642_sample_table.txt norm GSM1323642_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323642 2 Sample name: 69303805 MeDIP DNA from DNCB treated lymph node cells Input DNA from DNCB treated lymph node cells Nodes_DNCB_D5 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323642 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323642 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323642 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323642_69303805_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.4.zip P-GSE54768-1 ArrayExpress GSM1323642_sample_table.txt norm GSM1323642_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323642 1 Sample name: 69303805 MeDIP DNA from DNCB treated lymph node cells MeDIP DNA from DNCB treated lymph node cells Nodes_DNCB_D5 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323642 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323642 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323642 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323642_69303805_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.4.zip P-GSE54768-1 ArrayExpress GSM1323642_sample_table.txt norm GSM1323642_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323642 1 Sample name: 69303805 MeDIP DNA from DNCB treated lymph node cells MeDIP DNA from DNCB treated lymph node cells Nodes_DNCB_D5 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323642 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323642 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323642 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323642_69303805_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.4.zip P-GSE54768-1 ArrayExpress GSM1323642_sample_table.txt norm GSM1323642_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323641 2 Sample name: 69303505 MeDIP DNA from AOO treated lymph node cells Input DNA from AOO treated lymph node cells Nodes_AOO_A1 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323641 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323641 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323641 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323641_69303505_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.4.zip P-GSE54768-1 ArrayExpress GSM1323641_sample_table.txt norm GSM1323641_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323641 2 Sample name: 69303505 MeDIP DNA from AOO treated lymph node cells Input DNA from AOO treated lymph node cells Nodes_AOO_A1 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323641 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323641 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323641 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323641_69303505_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.5.zip P-GSE54768-1 ArrayExpress GSM1323641_sample_table.txt norm GSM1323641_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323641 1 Sample name: 69303505 MeDIP DNA from AOO treated lymph node cells MeDIP DNA from AOO treated lymph node cells Nodes_AOO_A1 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323641 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323641 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323641 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323641_69303505_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.4.zip P-GSE54768-1 ArrayExpress GSM1323641_sample_table.txt norm GSM1323641_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323641 1 Sample name: 69303505 MeDIP DNA from AOO treated lymph node cells MeDIP DNA from AOO treated lymph node cells Nodes_AOO_A1 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323641 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323641 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323641 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323641_69303505_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.5.zip P-GSE54768-1 ArrayExpress GSM1323641_sample_table.txt norm GSM1323641_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip AOO GSM1323640 2 Sample name: 69303205 MeDIP DNA from DNCB treated lymph node cells Input DNA from DNCB treated lymph node cells Nodes_DNCB_D2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323640 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323640 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323640 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323640_69303205_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.5.zip P-GSE54768-1 ArrayExpress GSM1323640_sample_table.txt norm GSM1323640_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323640 2 Sample name: 69303205 MeDIP DNA from DNCB treated lymph node cells Input DNA from DNCB treated lymph node cells Nodes_DNCB_D2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323640 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323640 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323640 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323640_69303205_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.5.zip P-GSE54768-1 ArrayExpress GSM1323640_sample_table.txt norm GSM1323640_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323640 1 Sample name: 69303205 MeDIP DNA from DNCB treated lymph node cells MeDIP DNA from DNCB treated lymph node cells Nodes_DNCB_D2 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323640 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323640 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323640 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323640_69303205_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.5.zip P-GSE54768-1 ArrayExpress GSM1323640_sample_table.txt norm GSM1323640_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323640 1 Sample name: 69303205 MeDIP DNA from DNCB treated lymph node cells MeDIP DNA from DNCB treated lymph node cells Nodes_DNCB_D2 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323640 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323640 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323640 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323640_69303205_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.5.zip P-GSE54768-1 ArrayExpress GSM1323640_sample_table.txt norm GSM1323640_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323639 2 Sample name: 69302905 MeDIP DNA from TMA treated lymph node cells Input DNA from TMA treated lymph node cells Nodes_TMA_T3 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323639 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323639 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323639 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323639_69302905_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.6.zip P-GSE54768-1 ArrayExpress GSM1323639_sample_table.txt norm GSM1323639_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323639 2 Sample name: 69302905 MeDIP DNA from TMA treated lymph node cells Input DNA from TMA treated lymph node cells Nodes_TMA_T3 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323639 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323639 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323639 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323639_69302905_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.6.zip P-GSE54768-1 ArrayExpress GSM1323639_sample_table.txt norm GSM1323639_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323639 1 Sample name: 69302905 MeDIP DNA from TMA treated lymph node cells MeDIP DNA from TMA treated lymph node cells Nodes_TMA_T3 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323639 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323639 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323639 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323639_69302905_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.6.zip P-GSE54768-1 ArrayExpress GSM1323639_sample_table.txt norm GSM1323639_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323639 1 Sample name: 69302905 MeDIP DNA from TMA treated lymph node cells MeDIP DNA from TMA treated lymph node cells Nodes_TMA_T3 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323639 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323639 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323639 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323639_69302905_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.6.zip P-GSE54768-1 ArrayExpress GSM1323639_sample_table.txt norm GSM1323639_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip TMA GSM1323638 1 Sample name: 69302605 MeDIP DNA from DNCB treated lymph node cells MeDIP DNA from DNCB treated lymph node cells Nodes_DNCB_D4 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323638 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323638 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323638 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323638_69302605_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.6.zip P-GSE54768-1 ArrayExpress GSM1323638_sample_table.txt norm GSM1323638_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323638 1 Sample name: 69302605 MeDIP DNA from DNCB treated lymph node cells MeDIP DNA from DNCB treated lymph node cells Nodes_DNCB_D4 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323638 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323638 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323638 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323638_69302605_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.7.zip P-GSE54768-1 ArrayExpress GSM1323638_sample_table.txt norm GSM1323638_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323638 2 Sample name: 69302605 MeDIP DNA from DNCB treated lymph node cells Input DNA from DNCB treated lymph node cells Nodes_DNCB_D4 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323638 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323638 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323638 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323638_69302605_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.6.zip P-GSE54768-1 ArrayExpress GSM1323638_sample_table.txt norm GSM1323638_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323638 2 Sample name: 69302605 MeDIP DNA from DNCB treated lymph node cells Input DNA from DNCB treated lymph node cells Nodes_DNCB_D4 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323638 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323638 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323638 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323638_69302605_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.7.zip P-GSE54768-1 ArrayExpress GSM1323638_sample_table.txt norm GSM1323638_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323637 1 Sample name: 69302305 MeDIP DNA from DNCB treated lymph node cells MeDIP DNA from DNCB treated lymph node cells Nodes_DNCB_D3 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323637 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323637 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323637 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323637_69302305_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.7.zip P-GSE54768-1 ArrayExpress GSM1323637_sample_table.txt norm GSM1323637_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323637 1 Sample name: 69302305 MeDIP DNA from DNCB treated lymph node cells MeDIP DNA from DNCB treated lymph node cells Nodes_DNCB_D3 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323637 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323637 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323637 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323637_69302305_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.7.zip P-GSE54768-1 ArrayExpress GSM1323637_sample_table.txt norm GSM1323637_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323637 2 Sample name: 69302305 MeDIP DNA from DNCB treated lymph node cells Input DNA from DNCB treated lymph node cells Nodes_DNCB_D3 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323637 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323637 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323637 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323637_69302305_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.7.zip P-GSE54768-1 ArrayExpress GSM1323637_sample_table.txt norm GSM1323637_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323637 2 Sample name: 69302305 MeDIP DNA from DNCB treated lymph node cells Input DNA from DNCB treated lymph node cells Nodes_DNCB_D3 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323637 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323637 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323637 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323637_69302305_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.7.zip P-GSE54768-1 ArrayExpress GSM1323637_sample_table.txt norm GSM1323637_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.1.zip DNCB GSM1323636 2 Sample name: 69277505 MeDIP DNA from DNCB treated lymph node cells Input DNA from DNCB treated lymph node cells Nodes_DNCB_D1 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323636 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323636 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323636 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323636_69277505_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.8.zip P-GSE54768-1 ArrayExpress GSM1323636_sample_table.txt norm GSM1323636_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip DNCB GSM1323636 2 Sample name: 69277505 MeDIP DNA from DNCB treated lymph node cells Input DNA from DNCB treated lymph node cells Nodes_DNCB_D1 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323636 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323636 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323636 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323636_69277505_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.8.zip P-GSE54768-1 ArrayExpress GSM1323636_sample_table.txt norm GSM1323636_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip DNCB GSM1323636 1 Sample name: 69277505 MeDIP DNA from DNCB treated lymph node cells MeDIP DNA from DNCB treated lymph node cells Nodes_DNCB_D1 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323636 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323636 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323636 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323636_69277505_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.8.zip P-GSE54768-1 ArrayExpress GSM1323636_sample_table.txt norm GSM1323636_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip DNCB GSM1323636 1 Sample name: 69277505 MeDIP DNA from DNCB treated lymph node cells MeDIP DNA from DNCB treated lymph node cells Nodes_DNCB_D1 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-8 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323636 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323636 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323636 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323636_69277505_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.8.zip P-GSE54768-1 ArrayExpress GSM1323636_sample_table.txt norm GSM1323636_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip DNCB GSM1323635 2 Sample name: 69277205 MeDIP DNA from TMA treated lymph node cells Input DNA from TMA treated lymph node cells Nodes_TMA_T1 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323635 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323635 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323635 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323635_69277205_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.8.zip P-GSE54768-1 ArrayExpress GSM1323635_sample_table.txt norm GSM1323635_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip TMA GSM1323635 2 Sample name: 69277205 MeDIP DNA from TMA treated lymph node cells Input DNA from TMA treated lymph node cells Nodes_TMA_T1 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323635 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323635 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323635 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323635_69277205_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.9.zip P-GSE54768-1 ArrayExpress GSM1323635_sample_table.txt norm GSM1323635_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip TMA GSM1323635 1 Sample name: 69277205 MeDIP DNA from TMA treated lymph node cells MeDIP DNA from TMA treated lymph node cells Nodes_TMA_T1 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323635 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323635 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323635 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323635_69277205_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.8.zip P-GSE54768-1 ArrayExpress GSM1323635_sample_table.txt norm GSM1323635_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip TMA GSM1323635 1 Sample name: 69277205 MeDIP DNA from TMA treated lymph node cells MeDIP DNA from TMA treated lymph node cells Nodes_TMA_T1 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323635 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323635 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323635 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323635_69277205_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.9.zip P-GSE54768-1 ArrayExpress GSM1323635_sample_table.txt norm GSM1323635_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip TMA GSM1323634 2 Sample name: 69276905 MeDIP DNA from AOO treated lymph node cells Input DNA from AOO treated lymph node cells Nodes_AOO_A2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323634 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323634 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323634 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323634_69276905_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.9.zip P-GSE54768-1 ArrayExpress GSM1323634_sample_table.txt norm GSM1323634_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip AOO GSM1323634 2 Sample name: 69276905 MeDIP DNA from AOO treated lymph node cells Input DNA from AOO treated lymph node cells Nodes_AOO_A2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323634 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323634 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323634 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323634_69276905_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.9.zip P-GSE54768-1 ArrayExpress GSM1323634_sample_table.txt norm GSM1323634_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip AOO GSM1323634 1 Sample name: 69276905 MeDIP DNA from AOO treated lymph node cells MeDIP DNA from AOO treated lymph node cells Nodes_AOO_A2 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323634 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323634 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323634 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323634_69276905_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.9.zip P-GSE54768-1 ArrayExpress GSM1323634_sample_table.txt norm GSM1323634_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip AOO GSM1323634 1 Sample name: 69276905 MeDIP DNA from AOO treated lymph node cells MeDIP DNA from AOO treated lymph node cells Nodes_AOO_A2 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323634 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323634 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323634 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323634_69276905_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.9.zip P-GSE54768-1 ArrayExpress GSM1323634_sample_table.txt norm GSM1323634_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip AOO GSM1323633 2 Sample name: 69275705 MeDIP DNA from AOO treated lymph node cells Input DNA from AOO treated lymph node cells Nodes_AOO_A4 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323633 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323633 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323633 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323633_69275705_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.10.zip P-GSE54768-1 ArrayExpress GSM1323633_sample_table.txt norm GSM1323633_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip AOO GSM1323633 2 Sample name: 69275705 MeDIP DNA from AOO treated lymph node cells Input DNA from AOO treated lymph node cells Nodes_AOO_A4 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323633 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323633 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323633 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323633_69275705_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.10.zip P-GSE54768-1 ArrayExpress GSM1323633_sample_table.txt norm GSM1323633_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip AOO GSM1323633 1 Sample name: 69275705 MeDIP DNA from AOO treated lymph node cells MeDIP DNA from AOO treated lymph node cells Nodes_AOO_A4 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323633 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323633 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323633 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323633_69275705_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.10.zip P-GSE54768-1 ArrayExpress GSM1323633_sample_table.txt norm GSM1323633_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip AOO GSM1323633 1 Sample name: 69275705 MeDIP DNA from AOO treated lymph node cells MeDIP DNA from AOO treated lymph node cells Nodes_AOO_A4 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-7 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323633 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323633 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323633 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323633_69275705_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.10.zip P-GSE54768-1 ArrayExpress GSM1323633_sample_table.txt norm GSM1323633_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip AOO GSM1323632 2 Sample name: 69275405 MeDIP DNA from TMA treated lymph node cells Input DNA from TMA treated lymph node cells Nodes_TMA_T2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323632 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323632 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323632 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323632_69275405_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.10.zip P-GSE54768-1 ArrayExpress GSM1323632_sample_table.txt norm GSM1323632_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip TMA GSM1323632 2 Sample name: 69275405 MeDIP DNA from TMA treated lymph node cells Input DNA from TMA treated lymph node cells Nodes_TMA_T2 Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323632 extract 2 genomic DNA P-GSE54768-4 ArrayExpress GSM1323632 LE 2 Cy3 P-GSE54768-5 ArrayExpress GSM1323632 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323632_69275405_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.11.zip P-GSE54768-1 ArrayExpress GSM1323632_sample_table.txt norm GSM1323632_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip TMA GSM1323632 1 Sample name: 69275405 MeDIP DNA from TMA treated lymph node cells MeDIP DNA from TMA treated lymph node cells Nodes_TMA_T2 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323632 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323632 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323632 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323632_69275405_635.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.10.zip P-GSE54768-1 ArrayExpress GSM1323632_sample_table.txt norm GSM1323632_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip TMA GSM1323632 1 Sample name: 69275405 MeDIP DNA from TMA treated lymph node cells MeDIP DNA from TMA treated lymph node cells Nodes_TMA_T2 mouse monoclonal antibody against 5-methylcytidine (Eurogentec) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 Lymph node EFO EFO_0000870 BALB/c EFO EFO_0000602 P-GSE54768-2 ArrayExpress P-GSE54768-3 ArrayExpress GSM1323632 extract 1 genomic DNA P-GSE54768-4 ArrayExpress GSM1323632 LE 1 Cy5 P-GSE54768-5 ArrayExpress GSM1323632 A-GEOD-16413 ArrayExpress array assay P-GSE54768-6 ArrayExpress GSM1323632_69275405_532.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.raw.11.zip P-GSE54768-1 ArrayExpress GSM1323632_sample_table.txt norm GSM1323632_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-54768/E-GEOD-54768.processed.2.zip TMA