Source Name	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [cell type]	Term Source REF	Term Accession Number	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [strain]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [CELL TYPE]	Term Source REF	Term Accession Number
GSM1289121 1	mouse hepatocyte primary culture	mouse hepatocyte primary culture	hepatocyte primary culture	  	  	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	C57/BL6J	P-GSE53299-2	ArrayExpress	P-GSE53299-3	ArrayExpress	P-GSE53299-4	ArrayExpress	GSM1289121 extract 1	total RNA	P-GSE53299-5	ArrayExpress	GSM1289121 LE 1	biotin	P-GSE53299-6	ArrayExpress	GSM1289121	A-AFFY-45	ArrayExpress	array assay	P-GSE53299-7	ArrayExpress	GSM1289121_mHepa.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.raw.1.zip	P-GSE53299-1	ArrayExpress	GSM1289121_sample_table.txt norm	GSM1289121_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.processed.1.zip	hepatocyte primary culture	  	        
GSM1289120 1	mouse embryonic stem cell	mouse embryonic stem cell	embryonic stem cell	EFO	http://purl.obolibrary.org/obo/CL_0002322	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	C57/BL6J	P-GSE53299-2	ArrayExpress	P-GSE53299-3	ArrayExpress	P-GSE53299-4	ArrayExpress	GSM1289120 extract 1	total RNA	P-GSE53299-5	ArrayExpress	GSM1289120 LE 1	biotin	P-GSE53299-6	ArrayExpress	GSM1289120	A-AFFY-45	ArrayExpress	array assay	P-GSE53299-7	ArrayExpress	GSM1289120_mES.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.raw.1.zip	P-GSE53299-1	ArrayExpress	GSM1289120_sample_table.txt norm	GSM1289120_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.processed.1.zip	embryonic stem cell	EFO	http://purl.obolibrary.org/obo/CL_0002322
GSM1289119 1	protein based mouse iPS line 4	protein based mouse iPS line 4	protein based iPS line	  	  	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	C57/BL6J	P-GSE53299-2	ArrayExpress	P-GSE53299-3	ArrayExpress	P-GSE53299-4	ArrayExpress	GSM1289119 extract 1	total RNA	P-GSE53299-5	ArrayExpress	GSM1289119 LE 1	biotin	P-GSE53299-6	ArrayExpress	GSM1289119	A-AFFY-45	ArrayExpress	array assay	P-GSE53299-7	ArrayExpress	GSM1289119_p-miPS_4.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.raw.1.zip	P-GSE53299-1	ArrayExpress	GSM1289119_sample_table.txt norm	GSM1289119_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.processed.1.zip	protein based iPS line	  	        
GSM1289118 1	protein based mouse iPS line 3	protein based mouse iPS line 3	protein based iPS line	  	  	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	C57/BL6J	P-GSE53299-2	ArrayExpress	P-GSE53299-3	ArrayExpress	P-GSE53299-4	ArrayExpress	GSM1289118 extract 1	total RNA	P-GSE53299-5	ArrayExpress	GSM1289118 LE 1	biotin	P-GSE53299-6	ArrayExpress	GSM1289118	A-AFFY-45	ArrayExpress	array assay	P-GSE53299-7	ArrayExpress	GSM1289118_p-miPS_3.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.raw.1.zip	P-GSE53299-1	ArrayExpress	GSM1289118_sample_table.txt norm	GSM1289118_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.processed.1.zip	protein based iPS line	  	        
GSM1289117 1	protein based mouse iPS line 2	protein based mouse iPS line 2	protein based iPS line	  	  	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	C57/BL6J	P-GSE53299-2	ArrayExpress	P-GSE53299-3	ArrayExpress	P-GSE53299-4	ArrayExpress	GSM1289117 extract 1	total RNA	P-GSE53299-5	ArrayExpress	GSM1289117 LE 1	biotin	P-GSE53299-6	ArrayExpress	GSM1289117	A-AFFY-45	ArrayExpress	array assay	P-GSE53299-7	ArrayExpress	GSM1289117_p-miPS_2.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.raw.1.zip	P-GSE53299-1	ArrayExpress	GSM1289117_sample_table.txt norm	GSM1289117_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.processed.1.zip	protein based iPS line	  	        
GSM1289116 1	protein based mouse iPS line 1	protein based mouse iPS line 1	protein based iPS line	  	  	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	C57/BL6J	P-GSE53299-2	ArrayExpress	P-GSE53299-3	ArrayExpress	P-GSE53299-4	ArrayExpress	GSM1289116 extract 1	total RNA	P-GSE53299-5	ArrayExpress	GSM1289116 LE 1	biotin	P-GSE53299-6	ArrayExpress	GSM1289116	A-AFFY-45	ArrayExpress	array assay	P-GSE53299-7	ArrayExpress	GSM1289116_p-miPS_1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.raw.1.zip	P-GSE53299-1	ArrayExpress	GSM1289116_sample_table.txt norm	GSM1289116_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-53299/E-GEOD-53299.processed.1.zip	protein based iPS line