Comment[ArrayExpressAccession]	E-GEOD-51554
MAGE-TAB Version	1.1					
Public Release Date	2013-10-23
Investigation Title	MicroRNA expression of clear cell papillary renal cell carcinoma					
Comment[Submitted Name]	MicroRNA expression of clear cell papillary renal cell carcinoma
Experiment Description	to see if CCPRCC has a distinct miRNA profile from CCRCC and PRCC miRNA v.2.0 chips on two portions of five CCPRCC cases (total 10 samples), three portions of two CCRCC cases and a further three CCRCC cases (total 9 samples), and five type I PRCC samples; a total of 24 samples					
Term Source Name	ArrayExpress	EFO
Term Source File	http://www.ebi.ac.uk/arrayexpress/	http://www.ebi.ac.uk/efo/efo.owl				
Person Last Name	lawrie	Lawrie				
Person First Name	charles	Charles				
Person Email	charles.lawrie@ndcls.ox.ac.uk					
Person Affiliation	University of Oxford					
Person Address	NDCLS, University of Oxford, John Radcliffe Hospital, Oxford, United Kingdom					
Person Roles	submitter					
Protocol Name	P-GSE51554-1	P-GSE51554-2	P-GSE51554-4	P-GSE51554-5	P-GSE51554-3	P-GSE51554-6
Protocol Description	miRNA QC tool normalised- intensity reverse logged analysed in Genespring (no added normalisation) ID_REF =  VALUE = miRNA QC tool normalised- intensity reverse logged p-value =  Detection = 	miRNA QC tool normalised- intensity reverse logged analysed in Genespring (no added normalisation) ID_REF =  VALUE = miRNA QC tool normalised- intensity reverse logged p-value =  CCPRCC#2-A) = 	standard Affymetrix protocol	standard Affymetrix protocol	extracted with recoverall kit from FFPE blocks	standard Affymetrix protocol
Protocol Type	normalization data transformation protocol	normalization data transformation protocol	labelling protocol	hybridization protocol	nucleic acid extraction protocol	array scanning protocol
Experimental Factor Name	DISEASE STATE					
Experimental Factor Type	disease state					
Comment[SecondaryAccession]	GSE51554					
Comment[GEOReleaseDate]	2013-10-23					
Comment[ArrayExpressSubmissionDate]	2013-10-22					
Comment[GEOLastUpdateDate]	2013-10-23					
Comment[AEExperimentType]	transcription profiling by array					
SDRF File	E-GEOD-51554.sdrf.txt