Source Name Comment [Sample_characteristics] Comment [Sample_source_name] Comment [Sample_title] Characteristics [Sex] Term Source REF Term Accession Number Characteristics [developmental stage] Characteristics [genotype] Characteristics [organism] Term Source REF Term Accession Number Protocol REF Term Source REF Extract Name Comment [INSTRUMENT_MODEL] Comment [LIBRARY_SELECTION] Comment [LIBRARY_SOURCE] Comment [LIBRARY_STRATEGY] Material Type Assay Name Comment [Platform_title] Technology Type Derived Array Data File Comment [Derived ArrayExpress FTP file] GSM1183836 1 strain: OP433(official name : OP433 genotype : unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : This strain's transgene was constructed by Mihail Sarov at the Max Planck Institute for Cell Biology and Genetics in Dresden description : using Tony Hyman's recombineering pipeline. The resulting plasmid was used for biolistic transformation of an unc-119(ed3) strain. The HLH-30::EGFP fusion protein is expressed in the correct hlh-30 spatio-temporal expression pattern. This strain was used for ChIP-seq experiments to map the in vivo binding sites for the HLH-30 transcription factor. made_by : Unknown ) HLH-30_GFP_L4_ChIP_Rep2 Snyder_HLH-30_GFP_L4_ChIP_Rep2 hermaphrodite EFO EFO_0001267 L4 unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) Caenorhabditis elegans EFO http://purl.obolibrary.org/obo/NCBITaxon_6239 P-GSE48751-1 ArrayExpress GSM1183836 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1183836 Illumina Genome Analyzer (Caenorhabditis elegans) sequencing assay GSM1183836_Snyder_HLH-30_GFP_L4_Rep2.GFF3 ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48751/E-GEOD-48751.processed.1.zip GSM1183836 1 strain: OP433(official name : OP433 genotype : unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : This strain's transgene was constructed by Mihail Sarov at the Max Planck Institute for Cell Biology and Genetics in Dresden description : using Tony Hyman's recombineering pipeline. The resulting plasmid was used for biolistic transformation of an unc-119(ed3) strain. The HLH-30::EGFP fusion protein is expressed in the correct hlh-30 spatio-temporal expression pattern. This strain was used for ChIP-seq experiments to map the in vivo binding sites for the HLH-30 transcription factor. made_by : Unknown ) HLH-30_GFP_L4_ChIP_Rep2 Snyder_HLH-30_GFP_L4_ChIP_Rep2 hermaphrodite EFO EFO_0001267 L4 unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) Caenorhabditis elegans EFO http://purl.obolibrary.org/obo/NCBITaxon_6239 P-GSE48751-1 ArrayExpress GSM1183836 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1183836 Illumina Genome Analyzer (Caenorhabditis elegans) sequencing assay GSM1183836_Snyder_HLH-30_GFP_L4_GFP_rep_2_120228_MAGNUM_00133_FC63B9P_L4_TGCT.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48751/E-GEOD-48751.processed.1.zip GSM1183835 1 strain: OP433(official name : OP433 genotype : unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : This strain's transgene was constructed by Mihail Sarov at the Max Planck Institute for Cell Biology and Genetics in Dresden description : using Tony Hyman's recombineering pipeline. The resulting plasmid was used for biolistic transformation of an unc-119(ed3) strain. The HLH-30::EGFP fusion protein is expressed in the correct hlh-30 spatio-temporal expression pattern. This strain was used for ChIP-seq experiments to map the in vivo binding sites for the HLH-30 transcription factor. made_by : Unknown ) HLH-30_GFP_L4_Input_Rep2 Snyder_HLH-30_GFP_L4_Input_Rep2 hermaphrodite EFO EFO_0001267 L4 unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) Caenorhabditis elegans EFO http://purl.obolibrary.org/obo/NCBITaxon_6239 P-GSE48751-1 ArrayExpress GSM1183835 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1183835 Illumina Genome Analyzer (Caenorhabditis elegans) sequencing assay GSM1183835_Snyder_HLH-30_GFP_L4_Input_rep_2_120302_COLUMBO_00153_FC63BFU_L7_TGCT.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48751/E-GEOD-48751.processed.1.zip GSM1183834 1 strain: OP433(official name : OP433 genotype : unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : This strain's transgene was constructed by Mihail Sarov at the Max Planck Institute for Cell Biology and Genetics in Dresden description : using Tony Hyman's recombineering pipeline. The resulting plasmid was used for biolistic transformation of an unc-119(ed3) strain. The HLH-30::EGFP fusion protein is expressed in the correct hlh-30 spatio-temporal expression pattern. This strain was used for ChIP-seq experiments to map the in vivo binding sites for the HLH-30 transcription factor. made_by : Unknown ) HLH-30_GFP_L4_ChIP_Rep1 Snyder_HLH-30_GFP_L4_ChIP_Rep1 hermaphrodite EFO EFO_0001267 L4 unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) Caenorhabditis elegans EFO http://purl.obolibrary.org/obo/NCBITaxon_6239 P-GSE48751-1 ArrayExpress GSM1183834 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1183834 Illumina Genome Analyzer (Caenorhabditis elegans) sequencing assay GSM1183834_Snyder_HLH-30_GFP_L4_Rep1.GFF3 ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48751/E-GEOD-48751.processed.1.zip GSM1183834 1 strain: OP433(official name : OP433 genotype : unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : This strain's transgene was constructed by Mihail Sarov at the Max Planck Institute for Cell Biology and Genetics in Dresden description : using Tony Hyman's recombineering pipeline. The resulting plasmid was used for biolistic transformation of an unc-119(ed3) strain. The HLH-30::EGFP fusion protein is expressed in the correct hlh-30 spatio-temporal expression pattern. This strain was used for ChIP-seq experiments to map the in vivo binding sites for the HLH-30 transcription factor. made_by : Unknown ) HLH-30_GFP_L4_ChIP_Rep1 Snyder_HLH-30_GFP_L4_ChIP_Rep1 hermaphrodite EFO EFO_0001267 L4 unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) Caenorhabditis elegans EFO http://purl.obolibrary.org/obo/NCBITaxon_6239 P-GSE48751-1 ArrayExpress GSM1183834 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1183834 Illumina Genome Analyzer (Caenorhabditis elegans) sequencing assay GSM1183834_Snyder_HLH-30_GFP_L4_GFP_rep_1_120228_MAGNUM_00133_FC63B9P_L4_ACGT.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48751/E-GEOD-48751.processed.1.zip GSM1183833 1 strain: OP433(official name : OP433 genotype : unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) outcross : 3 mutagen : Bombard tags : GFP::3xFlag description : This strain's transgene was constructed by Mihail Sarov at the Max Planck Institute for Cell Biology and Genetics in Dresden description : using Tony Hyman's recombineering pipeline. The resulting plasmid was used for biolistic transformation of an unc-119(ed3) strain. The HLH-30::EGFP fusion protein is expressed in the correct hlh-30 spatio-temporal expression pattern. This strain was used for ChIP-seq experiments to map the in vivo binding sites for the HLH-30 transcription factor. made_by : Unknown ) HLH-30_GFP_L4_Input_Rep1 Snyder_HLH-30_GFP_L4_Input_Rep1 hermaphrodite EFO EFO_0001267 L4 unc-119(ed3) III; wgIs433(hlh-30::TY1 EGFP FLAG; unc-119(+)) Caenorhabditis elegans EFO http://purl.obolibrary.org/obo/NCBITaxon_6239 P-GSE48751-1 ArrayExpress GSM1183833 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1183833 Illumina Genome Analyzer (Caenorhabditis elegans) sequencing assay GSM1183833_Snyder_HLH-30_GFP_L4_Input_rep_1_120302_COLUMBO_00153_FC63BFU_L7_ACGT.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48751/E-GEOD-48751.processed.1.zip