Source Name Comment [Sample_source_name] Comment [Sample_title] Characteristics [cell line] Term Source REF Term Accession Number Characteristics [cell type] Characteristics [organism] Term Source REF Term Accession Number Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [CELL LINE] Term Source REF Term Accession Number FactorValue [CELL TYPE] GSM1171647 1 MPM cell line MM05 MM05 P14 MM05 malignant pleural mesothelioma cells Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE48174-2 ArrayExpress GSM1171647 extract 1 total RNA P-GSE48174-3 ArrayExpress GSM1171647 LE 1 Alexa Fluor 555 P-GSE48174-4 ArrayExpress GSM1171647 A-GEOD-17327 ArrayExpress array assay P-GSE48174-5 ArrayExpress GSM1171647_252144110372_S01_GE1_107_Sep09_1_1.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.raw.1.zip P-GSE48174-1 ArrayExpress GSM1171647_sample_table.txt norm GSM1171647_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.processed.1.zip MM05 malignant pleural mesothelioma cells GSM1171646 1 MPM cell line MM05 MM05 P15 MM05 malignant pleural mesothelioma cells Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE48174-2 ArrayExpress GSM1171646 extract 1 total RNA P-GSE48174-3 ArrayExpress GSM1171646 LE 1 Alexa Fluor 555 P-GSE48174-4 ArrayExpress GSM1171646 A-GEOD-17327 ArrayExpress array assay P-GSE48174-5 ArrayExpress GSM1171646_252144110371_S01_GE1_107_Sep09_1_2.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.raw.1.zip P-GSE48174-1 ArrayExpress GSM1171646_sample_table.txt norm GSM1171646_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.processed.1.zip MM05 malignant pleural mesothelioma cells GSM1171645 1 Immortalised mesothelial cell line MeT-5A MET5A P24 MeT-5A immortalised pleural mesothelial cells Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE48174-2 ArrayExpress GSM1171645 extract 1 total RNA P-GSE48174-3 ArrayExpress GSM1171645 LE 1 Alexa Fluor 555 P-GSE48174-4 ArrayExpress GSM1171645 A-GEOD-17327 ArrayExpress array assay P-GSE48174-5 ArrayExpress GSM1171645_252144110371_S01_GE1_107_Sep09_1_1.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.raw.1.zip P-GSE48174-1 ArrayExpress GSM1171645_sample_table.txt norm GSM1171645_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.processed.1.zip MeT-5A immortalised pleural mesothelial cells GSM1171644 1 Immortalised mesothelial cell line MeT-5A MET5A P23 MeT-5A immortalised pleural mesothelial cells Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE48174-2 ArrayExpress GSM1171644 extract 1 total RNA P-GSE48174-3 ArrayExpress GSM1171644 LE 1 Alexa Fluor 555 P-GSE48174-4 ArrayExpress GSM1171644 A-GEOD-17327 ArrayExpress array assay P-GSE48174-5 ArrayExpress GSM1171644_252144110370_S01_GE1_107_Sep09_1_1.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.raw.1.zip P-GSE48174-1 ArrayExpress GSM1171644_sample_table.txt norm GSM1171644_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.processed.1.zip MeT-5A immortalised pleural mesothelial cells GSM1171643 1 MPM cell line MSTO-211H MSTO P13 MSTO-211H EFO EFO_0002839 malignant pleural mesothelioma cells Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE48174-2 ArrayExpress GSM1171643 extract 1 total RNA P-GSE48174-3 ArrayExpress GSM1171643 LE 1 Alexa Fluor 555 P-GSE48174-4 ArrayExpress GSM1171643 A-GEOD-17327 ArrayExpress array assay P-GSE48174-5 ArrayExpress GSM1171643_252144110373_S01_GE1_107_Sep09_1_1.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.raw.1.zip P-GSE48174-1 ArrayExpress GSM1171643_sample_table.txt norm GSM1171643_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.processed.1.zip MSTO-211H EFO EFO_0002839 malignant pleural mesothelioma cells GSM1171642 1 MPM cell line MSTO-211H MSTO P14 MSTO-211H EFO EFO_0002839 malignant pleural mesothelioma cells Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE48174-2 ArrayExpress GSM1171642 extract 1 total RNA P-GSE48174-3 ArrayExpress GSM1171642 LE 1 Alexa Fluor 555 P-GSE48174-4 ArrayExpress GSM1171642 A-GEOD-17327 ArrayExpress array assay P-GSE48174-5 ArrayExpress GSM1171642_252144110369_S01_GE1_107_Sep09_1_2.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.raw.1.zip P-GSE48174-1 ArrayExpress GSM1171642_sample_table.txt norm GSM1171642_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.processed.1.zip MSTO-211H EFO EFO_0002839 malignant pleural mesothelioma cells GSM1171641 1 MPM cell line H28 H28 P101 H28 malignant pleural mesothelioma cells Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE48174-2 ArrayExpress GSM1171641 extract 1 total RNA P-GSE48174-3 ArrayExpress GSM1171641 LE 1 Alexa Fluor 555 P-GSE48174-4 ArrayExpress GSM1171641 A-GEOD-17327 ArrayExpress array assay P-GSE48174-5 ArrayExpress GSM1171641_252144110370_S01_GE1_107_Sep09_1_2.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.raw.1.zip P-GSE48174-1 ArrayExpress GSM1171641_sample_table.txt norm GSM1171641_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.processed.1.zip H28 malignant pleural mesothelioma cells GSM1171640 1 MPM cell line H28 H28 P106 H28 malignant pleural mesothelioma cells Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE48174-2 ArrayExpress GSM1171640 extract 1 total RNA P-GSE48174-3 ArrayExpress GSM1171640 LE 1 Alexa Fluor 555 P-GSE48174-4 ArrayExpress GSM1171640 A-GEOD-17327 ArrayExpress array assay P-GSE48174-5 ArrayExpress GSM1171640_252144110373_S01_GE1_107_Sep09_1_2.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.raw.1.zip P-GSE48174-1 ArrayExpress GSM1171640_sample_table.txt norm GSM1171640_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.processed.1.zip H28 malignant pleural mesothelioma cells GSM1171639 1 MPM cell line H226 H226 P85 H226 malignant pleural mesothelioma cells Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE48174-2 ArrayExpress GSM1171639 extract 1 total RNA P-GSE48174-3 ArrayExpress GSM1171639 LE 1 Alexa Fluor 555 P-GSE48174-4 ArrayExpress GSM1171639 A-GEOD-17327 ArrayExpress array assay P-GSE48174-5 ArrayExpress GSM1171639_252144110372_S01_GE1_107_Sep09_1_2.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.raw.1.zip P-GSE48174-1 ArrayExpress GSM1171639_sample_table.txt norm GSM1171639_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.processed.1.zip H226 malignant pleural mesothelioma cells GSM1171638 1 MPM cell line H226 H226 P86 H226 malignant pleural mesothelioma cells Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE48174-2 ArrayExpress GSM1171638 extract 1 total RNA P-GSE48174-3 ArrayExpress GSM1171638 LE 1 Alexa Fluor 555 P-GSE48174-4 ArrayExpress GSM1171638 A-GEOD-17327 ArrayExpress array assay P-GSE48174-5 ArrayExpress GSM1171638_252144110369_S01_GE1_107_Sep09_1_1.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.raw.1.zip P-GSE48174-1 ArrayExpress GSM1171638_sample_table.txt norm GSM1171638_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48174/E-GEOD-48174.processed.1.zip H226 malignant pleural mesothelioma cells