Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [cell line]	Characteristics [cell type]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [shRNA expression]	Term Source REF	Term Accession Number	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [SHRNA EXPRESSION]	Term Source REF	Term Accession Number
GSM1171533 1	8508853001_F Replicate 2 of 2.	DROSHA-sh	MDA-MB-231-Drosha-sh_2	MDA-MB-231	basal-like breast cancer cells	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	DROSHA	  	  	P-GSE48160-2	ArrayExpress	P-GSE48160-3	ArrayExpress	P-GSE48160-4	ArrayExpress	GSM1171533 extract 1	total RNA	P-GSE48160-5	ArrayExpress	GSM1171533 LE 1	Biotin	P-GSE48160-6	ArrayExpress	GSM1171533	A-GEOD-10558	ArrayExpress	array assay	P-GSE48160-1	ArrayExpress	P-GSE48160-7	ArrayExpress	GSM1171533_sample_table.txt norm	GSM1171533_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48160/E-GEOD-48160.processed.1.zip	DROSHA	  	        
GSM1171532 1	8508853001_E Replicate 1 of 2.	DROSHA-sh	MDA-MB-231-DROSHA-sh_1	MDA-MB-231	basal-like breast cancer cells	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	DROSHA	  	  	P-GSE48160-2	ArrayExpress	P-GSE48160-3	ArrayExpress	P-GSE48160-4	ArrayExpress	GSM1171532 extract 1	total RNA	P-GSE48160-5	ArrayExpress	GSM1171532 LE 1	Biotin	P-GSE48160-6	ArrayExpress	GSM1171532	A-GEOD-10558	ArrayExpress	array assay	P-GSE48160-1	ArrayExpress	P-GSE48160-7	ArrayExpress	GSM1171532_sample_table.txt norm	GSM1171532_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48160/E-GEOD-48160.processed.1.zip	DROSHA	  	        
GSM1171531 1	8508853001_D Replicate 2 of 2.	DICER1-sh	MB23-DICER1-sh_2	MDA-MB-231	basal-like breast cancer cells	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	DICER1	  	  	P-GSE48160-2	ArrayExpress	P-GSE48160-3	ArrayExpress	P-GSE48160-4	ArrayExpress	GSM1171531 extract 1	total RNA	P-GSE48160-5	ArrayExpress	GSM1171531 LE 1	Biotin	P-GSE48160-6	ArrayExpress	GSM1171531	A-GEOD-10558	ArrayExpress	array assay	P-GSE48160-1	ArrayExpress	P-GSE48160-7	ArrayExpress	GSM1171531_sample_table.txt norm	GSM1171531_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48160/E-GEOD-48160.processed.1.zip	DICER1	  	        
GSM1171530 1	8508853001_C Replicate 1 of 2.	DICER1-sh	MB23-DICER1-sh_1	MDA-MB-231	basal-like breast cancer cells	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	DICER1	  	  	P-GSE48160-2	ArrayExpress	P-GSE48160-3	ArrayExpress	P-GSE48160-4	ArrayExpress	GSM1171530 extract 1	total RNA	P-GSE48160-5	ArrayExpress	GSM1171530 LE 1	Biotin	P-GSE48160-6	ArrayExpress	GSM1171530	A-GEOD-10558	ArrayExpress	array assay	P-GSE48160-1	ArrayExpress	P-GSE48160-7	ArrayExpress	GSM1171530_sample_table.txt norm	GSM1171530_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48160/E-GEOD-48160.processed.1.zip	DICER1	  	        
GSM1171529 1	8508853001_B Replicate 2 of 2.	Control	MDA-MB-231_2	MDA-MB-231	basal-like breast cancer cells	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	control	EFO	EFO_0001461	P-GSE48160-2	ArrayExpress	P-GSE48160-3	ArrayExpress	P-GSE48160-4	ArrayExpress	GSM1171529 extract 1	total RNA	P-GSE48160-5	ArrayExpress	GSM1171529 LE 1	Biotin	P-GSE48160-6	ArrayExpress	GSM1171529	A-GEOD-10558	ArrayExpress	array assay	P-GSE48160-1	ArrayExpress	P-GSE48160-7	ArrayExpress	GSM1171529_sample_table.txt norm	GSM1171529_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48160/E-GEOD-48160.processed.1.zip	control	EFO	EFO_0001461
GSM1171528 1	8508853001_A Replicate 1 of 2.	Control	MDA-MB-231_1	MDA-MB-231	basal-like breast cancer cells	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	control	EFO	EFO_0001461	P-GSE48160-2	ArrayExpress	P-GSE48160-3	ArrayExpress	P-GSE48160-4	ArrayExpress	GSM1171528 extract 1	total RNA	P-GSE48160-5	ArrayExpress	GSM1171528 LE 1	Biotin	P-GSE48160-6	ArrayExpress	GSM1171528	A-GEOD-10558	ArrayExpress	array assay	P-GSE48160-1	ArrayExpress	P-GSE48160-7	ArrayExpress	GSM1171528_sample_table.txt norm	GSM1171528_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-48160/E-GEOD-48160.processed.1.zip	control	EFO	EFO_0001461