Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [carbon source]	Characteristics [genotype]	Characteristics [lineage]	Characteristics [media]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [strain/background]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Comment [INSTRUMENT_MODEL]	Comment [LIBRARY_SELECTION]	Comment [LIBRARY_SOURCE]	Comment [LIBRARY_STRATEGY]	Material Type	Assay Name	Comment [ENA_EXPERIMENT]	Comment [Platform_title]	Technology Type	Protocol REF	Term Source REF	Scan Name	Comment [ENA_RUN]	Comment [FASTQ_URI]	FactorValue [GENOTYPE]
GSM1155402 1	mRNA-seq purified mRNA	Bacterial culture, lmo0753 deletion	EGDe 0753 Rhamnose-2	L-rhamnose	Δlmo0753	LII	phenol-red broth	Listeria monocytogenes	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1639	EGDe	P-GSE47721-1	ArrayExpress	P-GSE47721-2	ArrayExpress	GSM1155402 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1155402	SRX297352	Illumina HiSeq 2000 (Listeria monocytogenes)	sequencing assay	P-GSE47721-3	ArrayExpress	SRR887233_2.fastq.gz	SRR887233	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR887/SRR887233/SRR887233_2.fastq.gz	Δlmo0753
GSM1155402 1	mRNA-seq purified mRNA	Bacterial culture, lmo0753 deletion	EGDe 0753 Rhamnose-2	L-rhamnose	Δlmo0753	LII	phenol-red broth	Listeria monocytogenes	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1639	EGDe	P-GSE47721-1	ArrayExpress	P-GSE47721-2	ArrayExpress	GSM1155402 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1155402	SRX297352	Illumina HiSeq 2000 (Listeria monocytogenes)	sequencing assay	P-GSE47721-3	ArrayExpress	SRR887233_1.fastq.gz	SRR887233	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR887/SRR887233/SRR887233_1.fastq.gz	Δlmo0753
GSM1155401 1	mRNA-seq purified mRNA	Bacterial culture, lmo0753 deletion	EGDe 0753 Rhamnose-1	L-rhamnose	Δlmo0753	LII	phenol-red broth	Listeria monocytogenes	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1639	EGDe	P-GSE47721-1	ArrayExpress	P-GSE47721-2	ArrayExpress	GSM1155401 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1155401	SRX297351	Illumina HiSeq 2000 (Listeria monocytogenes)	sequencing assay	P-GSE47721-3	ArrayExpress	SRR887232_2.fastq.gz	SRR887232	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR887/SRR887232/SRR887232_2.fastq.gz	Δlmo0753
GSM1155401 1	mRNA-seq purified mRNA	Bacterial culture, lmo0753 deletion	EGDe 0753 Rhamnose-1	L-rhamnose	Δlmo0753	LII	phenol-red broth	Listeria monocytogenes	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1639	EGDe	P-GSE47721-1	ArrayExpress	P-GSE47721-2	ArrayExpress	GSM1155401 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1155401	SRX297351	Illumina HiSeq 2000 (Listeria monocytogenes)	sequencing assay	P-GSE47721-3	ArrayExpress	SRR887232_1.fastq.gz	SRR887232	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR887/SRR887232/SRR887232_1.fastq.gz	Δlmo0753
GSM1155400 1	mRNA-seq purified mRNA	Bacterial culture, WT	EGDe WT Rhamnose-2	L-rhamnose	wild-type	LII	phenol-red broth	Listeria monocytogenes	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1639	EGDe	P-GSE47721-1	ArrayExpress	P-GSE47721-2	ArrayExpress	GSM1155400 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1155400	SRX297350	Illumina HiSeq 2000 (Listeria monocytogenes)	sequencing assay	P-GSE47721-3	ArrayExpress	SRR887231_2.fastq.gz	SRR887231	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR887/SRR887231/SRR887231_2.fastq.gz	wild-type
GSM1155400 1	mRNA-seq purified mRNA	Bacterial culture, WT	EGDe WT Rhamnose-2	L-rhamnose	wild-type	LII	phenol-red broth	Listeria monocytogenes	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1639	EGDe	P-GSE47721-1	ArrayExpress	P-GSE47721-2	ArrayExpress	GSM1155400 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1155400	SRX297350	Illumina HiSeq 2000 (Listeria monocytogenes)	sequencing assay	P-GSE47721-3	ArrayExpress	SRR887231_1.fastq.gz	SRR887231	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR887/SRR887231/SRR887231_1.fastq.gz	wild-type
GSM1155399 1	mRNA-seq purified mRNA	Bacterial culture, WT	EGDe WT Rhamnose-1	L-rhamnose	wild-type	LII	phenol-red broth	Listeria monocytogenes	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1639	EGDe	P-GSE47721-1	ArrayExpress	P-GSE47721-2	ArrayExpress	GSM1155399 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1155399	SRX297349	Illumina HiSeq 2000 (Listeria monocytogenes)	sequencing assay	P-GSE47721-3	ArrayExpress	SRR887230_2.fastq.gz	SRR887230	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR887/SRR887230/SRR887230_2.fastq.gz	wild-type
GSM1155399 1	mRNA-seq purified mRNA	Bacterial culture, WT	EGDe WT Rhamnose-1	L-rhamnose	wild-type	LII	phenol-red broth	Listeria monocytogenes	EFO	http://purl.obolibrary.org/obo/NCBITaxon_1639	EGDe	P-GSE47721-1	ArrayExpress	P-GSE47721-2	ArrayExpress	GSM1155399 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1155399	SRX297349	Illumina HiSeq 2000 (Listeria monocytogenes)	sequencing assay	P-GSE47721-3	ArrayExpress	SRR887230_1.fastq.gz	SRR887230	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR887/SRR887230/SRR887230_1.fastq.gz	wild-type