Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [cell line] Characteristics [cell type] Characteristics [chip antibodies] Characteristics [organism] Term Source REF Term Accession Number Characteristics [replicate] Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Comment [INSTRUMENT_MODEL] Comment [LIBRARY_SELECTION] Comment [LIBRARY_SOURCE] Comment [LIBRARY_STRATEGY] Material Type Assay Name Comment [ENA_EXPERIMENT] Comment [Platform_title] Technology Type Protocol REF Term Source REF Scan Name Comment [ENA_RUN] Comment [FASTQ_URI] Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [CELL TYPE] FactorValue [CHIP ANTIBODIES] FactorValue [REPLICATE] FactorValue [TREATMENT] GSM1124006 1 Input DNA from cells treated with Dex + E2 - replicate 1 7438 cells + Afos Input Afos (Dex + E2) 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124006 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124006 SRX268271 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830333 SRR830333 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830333/SRR830333.fastq.gz GSM1124006_GH615_7438_Afos_Input_DexE2_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.1.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) not specified replicate 1 Dexamethasone + Estradiol for 30 minutes GSM1124005 1 ER-ChIP in cells treated with Dex + E2 - replicate 2 7438 cells + Afos ER ChIP-Seq Afos (Dex + E2) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124005 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124005 SRX268270 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830332 SRR830332 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830332/SRR830332.fastq.gz GSM1124005_GH614_7438_Afos_ER_DexE2_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.2.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 Dexamethasone + Estradiol for 30 minutes GSM1124005 1 ER-ChIP in cells treated with Dex + E2 - replicate 2 7438 cells + Afos ER ChIP-Seq Afos (Dex + E2) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124005 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124005 SRX268270 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830332 SRR830332 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830332/SRR830332.fastq.gz GSM1124005_GH614_7438_Afos_ER_DexE2_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.2.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 Dexamethasone + Estradiol for 30 minutes GSM1124004 1 ER-ChIP in cells treated with Dex + E2 - replicate 1 7438 cells + Afos ER ChIP-Seq Afos (Dex + E2) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124004 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124004 SRX268269 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830331 SRR830331 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830331/SRR830331.fastq.gz GSM1124004_GH606_7438_Afos_ER_DexE2_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.2.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Dexamethasone + Estradiol for 30 minutes GSM1124004 1 ER-ChIP in cells treated with Dex + E2 - replicate 1 7438 cells + Afos ER ChIP-Seq Afos (Dex + E2) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124004 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124004 SRX268269 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830331 SRR830331 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830331/SRR830331.fastq.gz GSM1124004_GH606_7438_Afos_ER_DexE2_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.2.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Dexamethasone + Estradiol for 30 minutes GSM1124003 1 ER-ChIP in cells treated with E2 - replicate 2 7438 cells + Afos ER ChIP-Seq Afos (+E2) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124003 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124003 SRX268268 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830330 SRR830330 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830330/SRR830330.fastq.gz GSM1124003_GH613_7438_Afos_ER_E2_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.3.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 Estradiol for 30 minutes GSM1124003 1 ER-ChIP in cells treated with E2 - replicate 2 7438 cells + Afos ER ChIP-Seq Afos (+E2) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124003 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124003 SRX268268 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830330 SRR830330 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830330/SRR830330.fastq.gz GSM1124003_GH613_7438_Afos_ER_E2_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.3.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 Estradiol for 30 minutes GSM1124002 1 ER-ChIP in cells treated with E2 - replicate 1 7438 cells + Afos ER ChIP-Seq Afos (+E2) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124002 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124002 SRX268267 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830329 SRR830329 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830329/SRR830329.fastq.gz GSM1124002_GH605_7438_Afos_ER_E2_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.3.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Estradiol for 30 minutes GSM1124002 1 ER-ChIP in cells treated with E2 - replicate 1 7438 cells + Afos ER ChIP-Seq Afos (+E2) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124002 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124002 SRX268267 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830329 SRR830329 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830329/SRR830329.fastq.gz GSM1124002_GH605_7438_Afos_ER_E2_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.3.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Estradiol for 30 minutes GSM1124001 1 ER-ChIP in cells treated with Dex - replicate 2 7438 cells + Afos ER ChIP-Seq Afos (+Dex) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124001 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124001 SRX268266 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830328 SRR830328 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830328/SRR830328.fastq.gz GSM1124001_GH612_7438_Afos_ER_Dex_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.3.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 Dexamethasone for 30 minutes GSM1124001 1 ER-ChIP in cells treated with Dex - replicate 2 7438 cells + Afos ER ChIP-Seq Afos (+Dex) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124001 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124001 SRX268266 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830328 SRR830328 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830328/SRR830328.fastq.gz GSM1124001_GH612_7438_Afos_ER_Dex_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.3.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 Dexamethasone for 30 minutes GSM1124000 1 ER-ChIP in cells treated with Dex - replicate 1 7438 cells + Afos ER ChIP-Seq Afos (+Dex) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124000 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124000 SRX268265 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830327 SRR830327 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830327/SRR830327.fastq.gz GSM1124000_GH604_7438_Afos_ER_Dex_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.4.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Dexamethasone for 30 minutes GSM1124000 1 ER-ChIP in cells treated with Dex - replicate 1 7438 cells + Afos ER ChIP-Seq Afos (+Dex) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1124000 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1124000 SRX268265 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830327 SRR830327 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830327/SRR830327.fastq.gz GSM1124000_GH604_7438_Afos_ER_Dex_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.4.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Dexamethasone for 30 minutes GSM1123999 1 ER-ChIP in untreated cells - replicate 2 7438 cells + Afos ER ChIP-Seq Afos (untreated) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123999 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123999 SRX268264 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830326 SRR830326 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830326/SRR830326.fastq.gz GSM1123999_GH611_7438_Afos_ER_unt_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.4.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 untreated GSM1123999 1 ER-ChIP in untreated cells - replicate 2 7438 cells + Afos ER ChIP-Seq Afos (untreated) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123999 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123999 SRX268264 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830326 SRR830326 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830326/SRR830326.fastq.gz GSM1123999_GH611_7438_Afos_ER_unt_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.4.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 untreated GSM1123998 1 ER-ChIP in untreated cells - replicate 1 7438 cells + Afos ER ChIP-Seq Afos (untreated) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123998 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123998 SRX268263 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830325 SRR830325 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830325/SRR830325.fastq.gz GSM1123998_GH603_7438_Afos_ER_unt_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.5.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 untreated GSM1123998 1 ER-ChIP in untreated cells - replicate 1 7438 cells + Afos ER ChIP-Seq Afos (untreated) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123998 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123998 SRX268263 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830325 SRR830325 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830325/SRR830325.fastq.gz GSM1123998_GH603_7438_Afos_ER_unt_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.5.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 untreated GSM1123997 1 GR-ChIP in cells treated with Dex + E2 - replicate 2 7438 cells + Afos GR ChIP-Seq Afos (Dex + E2) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123997 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123997 SRX268262 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830324 SRR830324 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830324/SRR830324.fastq.gz GSM1123997_GH610_7438_Afos_GR_DexE2_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.5.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 Dexamethasone + Estradiol for 30 minutes GSM1123997 1 GR-ChIP in cells treated with Dex + E2 - replicate 2 7438 cells + Afos GR ChIP-Seq Afos (Dex + E2) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123997 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123997 SRX268262 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830324 SRR830324 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830324/SRR830324.fastq.gz GSM1123997_GH610_7438_Afos_GR_DexE2_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.5.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 Dexamethasone + Estradiol for 30 minutes GSM1123996 1 GR-ChIP in cells treated with Dex + E2 - replicate 1 7438 cells + Afos GR ChIP-Seq Afos (Dex + E2) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123996 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123996 SRX268261 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830323 SRR830323 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830323/SRR830323.fastq.gz GSM1123996_GH602_7438_Afos_GR_DexE2_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.6.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Dexamethasone + Estradiol for 30 minutes GSM1123996 1 GR-ChIP in cells treated with Dex + E2 - replicate 1 7438 cells + Afos GR ChIP-Seq Afos (Dex + E2) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123996 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123996 SRX268261 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830323 SRR830323 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830323/SRR830323.fastq.gz GSM1123996_GH602_7438_Afos_GR_DexE2_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.6.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Dexamethasone + Estradiol for 30 minutes GSM1123995 1 GR-ChIP in cells treated with E2 - replicate 2 7438 cells + Afos GR ChIP-Seq Afos (+E2) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123995 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123995 SRX268260 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830322 SRR830322 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830322/SRR830322.fastq.gz GSM1123995_GH609_7438_Afos_GR_E2_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.6.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 Estradiol for 30 minutes GSM1123995 1 GR-ChIP in cells treated with E2 - replicate 2 7438 cells + Afos GR ChIP-Seq Afos (+E2) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123995 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123995 SRX268260 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830322 SRR830322 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830322/SRR830322.fastq.gz GSM1123995_GH609_7438_Afos_GR_E2_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.6.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 Estradiol for 30 minutes GSM1123994 1 GR-ChIP in cells treated with E2 - replicate 1 7438 cells + Afos GR ChIP-Seq Afos (+E2) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123994 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123994 SRX268259 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830321 SRR830321 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830321/SRR830321.fastq.gz GSM1123994_GH601_7438_Afos_GR_E2_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.6.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Estradiol for 30 minutes GSM1123994 1 GR-ChIP in cells treated with E2 - replicate 1 7438 cells + Afos GR ChIP-Seq Afos (+E2) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123994 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123994 SRX268259 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830321 SRR830321 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830321/SRR830321.fastq.gz GSM1123994_GH601_7438_Afos_GR_E2_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.7.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Estradiol for 30 minutes GSM1123993 1 GR-ChIP in cells treated with Dex - replicate 2 7438 cells + Afos GR ChIP-Seq Afos (+Dex) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123993 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123993 SRX268258 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830320 SRR830320 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830320/SRR830320.fastq.gz GSM1123993_GH608_7438_Afos_GR_Dex_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.7.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 Dexamethasone for 30 minutes GSM1123993 1 GR-ChIP in cells treated with Dex - replicate 2 7438 cells + Afos GR ChIP-Seq Afos (+Dex) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123993 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123993 SRX268258 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830320 SRR830320 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830320/SRR830320.fastq.gz GSM1123993_GH608_7438_Afos_GR_Dex_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.7.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 Dexamethasone for 30 minutes GSM1123992 1 GR-ChIP in cells treated with Dex - replicate 1 7438 cells + Afos GR ChIP-Seq Afos (+Dex) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123992 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123992 SRX268257 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830319 SRR830319 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830319/SRR830319.fastq.gz GSM1123992_GH600_7438_Afos_GR_Dex_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.7.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Dexamethasone for 30 minutes GSM1123992 1 GR-ChIP in cells treated with Dex - replicate 1 7438 cells + Afos GR ChIP-Seq Afos (+Dex) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123992 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123992 SRX268257 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830319 SRR830319 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830319/SRR830319.fastq.gz GSM1123992_GH600_7438_Afos_Dex_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.7.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Dexamethasone for 30 minutes GSM1123991 1 GR-ChIP in untreated cells - replicate 2 7438 cells + Afos GR ChIP-Seq Afos (untreated) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123991 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123991 SRX268256 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830318 SRR830318 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830318/SRR830318.fastq.gz GSM1123991_GH607_7438_Afos_GR_unt_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.7.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 untreated GSM1123991 1 GR-ChIP in untreated cells - replicate 2 7438 cells + Afos GR ChIP-Seq Afos (untreated) r2 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123991 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123991 SRX268256 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830318 SRR830318 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830318/SRR830318.fastq.gz GSM1123991_GH607_7438_Afos_GR_unt_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.8.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 untreated GSM1123990 1 GR-ChIP in untreated cells - replicate 1 7438 cells + Afos GR ChIP-Seq Afos (untreated) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123990 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123990 SRX268255 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830317 SRR830317 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830317/SRR830317.fastq.gz GSM1123990_GH599_7438_Afos_unt_ChIP_mm9.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.8.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 untreated GSM1123990 1 GR-ChIP in untreated cells - replicate 1 7438 cells + Afos GR ChIP-Seq Afos (untreated) r1 7438 cells mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123990 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123990 SRX268255 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830317 SRR830317 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830317/SRR830317.fastq.gz GSM1123990_GH599_7438_Afos_GR_unt_ChIP_mm9_hotspot_sat.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.8.zip mouse mammary cells (express GFP-GR, Cherry-ER, and Afos under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 untreated GSM1123989 1 ER(DBDmut)-ChIP in cells treated with Dex + E2 - replicate 2 3617 cells expressing ER DBD mutant ER DBD mut ChIP-Seq (Dex + E2) r2 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER which has been mutated in its DNA binding domain - under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123989 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123989 SRX268254 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830316 SRR830316 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830316/SRR830316.fastq.gz GSM1123989_GH523_ER_DBD_mut_pDexE2_r2.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.8.zip mouse mammary cells (express GFP-GR and Cherry-ER which has been mutated in its DNA binding domain - under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 Dexamethasone + Estradiol for 30 minutes GSM1123988 1 ER(DBDmut)-ChIP in cells treated with Dex + E2 - replicate 1 3617 cells expressing ER DBD mutant ER DBD mut ChIP-Seq (Dex + E2) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER which has been mutated in its DNA binding domain - under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123988 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123988 SRX268253 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830315 SRR830315 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830315/SRR830315.fastq.gz GSM1123988_GH522_ER_DBD_mut_pE2_r2.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.9.zip mouse mammary cells (express GFP-GR and Cherry-ER which has been mutated in its DNA binding domain - under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Dexamethasone + Estradiol for 30 minutes GSM1123987 1 ER(DBDmut)-ChIP in cells treated with E2 - replicate 2 3617 cells expressing ER DBD mutant ER DBD mut ChIP-Seq (+E2) r2 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER which has been mutated in its DNA binding domain - under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123987 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123987 SRX268252 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830314 SRR830314 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830314/SRR830314.fastq.gz GSM1123987_GH519_ER_DBD_mut_pDexE2_r1.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.9.zip mouse mammary cells (express GFP-GR and Cherry-ER which has been mutated in its DNA binding domain - under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 Estradiol for 30 minutes GSM1123986 1 ER(DBDmut)-ChIP in cells treated with E2 - replicate 1 3617 cells expressing ER DBD mutant ER DBD mut ChIP-Seq (+E2) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER which has been mutated in its DNA binding domain - under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123986 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123986 SRX268251 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830313 SRR830313 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830313/SRR830313.fastq.gz GSM1123986_GH518_ER_DBD_mut_pE2_r1.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.10.zip mouse mammary cells (express GFP-GR and Cherry-ER which has been mutated in its DNA binding domain - under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Estradiol for 30 minutes GSM1123985 1 Input DNA from cells treated with Dex + E2 - replicate 2 7438 cells Input (Dex + E2) r2 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123985 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123985 SRX268250 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830312 SRR830312 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830312/SRR830312.fastq.gz GSM1123985_GH319_Input_pDexE2_r2.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.10.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) not specified replicate 2 Dexamethasone + Estradiol for 30 minutes GSM1123984 1 Input DNA from cells treated with Dex + E2 - replicate 1 7438 cells Input (Dex + E2) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123984 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123984 SRX268249 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830311 SRR830311 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830311/SRR830311.fastq.gz GSM1123984_GH257_Input_pDexE2_r1.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.10.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) not specified replicate 1 Dexamethasone + Estradiol for 30 minutes GSM1123983 1 ER-ChIP in cells treated with Dex + E2 - replicate 2 7438 cells ER ChIP-Seq (Dex + E2) r2 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123983 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123983 SRX268248 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830310 SRR830310 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830310/SRR830310.fastq.gz GSM1123983_GH318_ER_ChIP_pDexE2_r2.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.11.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 Dexamethasone + Estradiol for 30 minutes GSM1123982 1 ER-ChIP in cells treated with Dex + E2 - replicate 1 7438 cells ER ChIP-Seq (Dex + E2) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123982 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123982 SRX268247 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830309 SRR830309 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830309/SRR830309.fastq.gz GSM1123982_pk_RC_7438_ER_unt_sat_th10.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.11.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Dexamethasone + Estradiol for 30 minutes GSM1123982 1 ER-ChIP in cells treated with Dex + E2 - replicate 1 7438 cells ER ChIP-Seq (Dex + E2) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123982 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123982 SRX268247 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830309 SRR830309 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830309/SRR830309.fastq.gz GSM1123982_GH256_ER_ChIP_pDexE2_r1.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.11.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Dexamethasone + Estradiol for 30 minutes GSM1123981 1 ER-ChIP in cells treated with E2 - replicate 2 7438 cells ER ChIP-Seq (+E2) r2 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123981 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123981 SRX268246 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830308 SRR830308 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830308/SRR830308.fastq.gz GSM1123981_GH317_ER_ChIP_pE2_r2.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.11.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 Estradiol for 30 minutes GSM1123980 1 ER-ChIP in cells treated with E2 - replicate 1 7438 cells ER ChIP-Seq (+E2) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123980 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123980 SRX268245 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830307 SRR830307 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830307/SRR830307.fastq.gz GSM1123980_pk_RC_7438_ER_E2_sat_th10.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.11.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Estradiol for 30 minutes GSM1123980 1 ER-ChIP in cells treated with E2 - replicate 1 7438 cells ER ChIP-Seq (+E2) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123980 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123980 SRX268245 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830307 SRR830307 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830307/SRR830307.fastq.gz GSM1123980_GH255_ER_ChIP_pE2_r1.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.12.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Estradiol for 30 minutes GSM1123979 1 ER-ChIP in cells treated with Dex - replicate 2 7438 cells ER ChIP-Seq (+Dex) r2 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123979 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123979 SRX268244 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830306 SRR830306 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830306/SRR830306.fastq.gz GSM1123979_GH316_ER_ChIP_pDex_r2.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.12.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 Dexamethasone for 30 minutes GSM1123978 1 ER-ChIP in cells treated with Dex - replicate 1 7438 cells ER ChIP-Seq (+Dex) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123978 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123978 SRX268243 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830305 SRR830305 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830305/SRR830305.fastq.gz GSM1123978_GH254_ER_ChIP_pDex_r1.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.12.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Dexamethasone for 30 minutes GSM1123978 1 ER-ChIP in cells treated with Dex - replicate 1 7438 cells ER ChIP-Seq (+Dex) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123978 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123978 SRX268243 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830305 SRR830305 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830305/SRR830305.fastq.gz GSM1123978_pk_RC_7438_ER_Dex_sat_th10.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.12.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 Dexamethasone for 30 minutes GSM1123977 1 ER-ChIP in untreated cells - replicate 2 7438 cells ER ChIP-Seq (untreated) r2 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123977 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123977 SRX268242 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830304 SRR830304 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830304/SRR830304.fastq.gz GSM1123977_GH315_ER_ChIP_unt_r2.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.12.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 2 untreated GSM1123976 1 ER-ChIP in untreated cells - replicate 1 7438 cells ER ChIP-Seq (untreated) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123976 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123976 SRX268241 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830303 SRR830303 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830303/SRR830303.fastq.gz GSM1123976_pk_RC_7438_ER_Both_sat_th10.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.12.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 untreated GSM1123976 1 ER-ChIP in untreated cells - replicate 1 7438 cells ER ChIP-Seq (untreated) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123976 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123976 SRX268241 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830303 SRR830303 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830303/SRR830303.fastq.gz GSM1123976_GH253_ER_ChIP_unt_r1.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.13.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz replicate 1 untreated GSM1123975 1 GR-ChIP in cells treated with Dex + E2 - replicate 2 7438 cells GR ChIP-Seq (Dex + E2) r2 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123975 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123975 SRX268240 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830302 SRR830302 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830302/SRR830302.fastq.gz GSM1123975_GH314_GR_ChIP_pDexE2_r2.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.13.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 Dexamethasone + Estradiol for 30 minutes GSM1123974 1 GR-ChIP in cells treated with Dex + E2 - replicate 1 7438 cells GR ChIP-Seq (Dex + E2) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123974 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123974 SRX268239 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830301 SRR830301 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830301/SRR830301.fastq.gz GSM1123974_pk_RC_7438_GR_unt_sat_th10.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.13.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Dexamethasone + Estradiol for 30 minutes GSM1123974 1 GR-ChIP in cells treated with Dex + E2 - replicate 1 7438 cells GR ChIP-Seq (Dex + E2) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123974 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123974 SRX268239 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830301 SRR830301 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830301/SRR830301.fastq.gz GSM1123974_GH252_GR_ChIP_pDexE2_r1.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.13.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Dexamethasone + Estradiol for 30 minutes GSM1123973 1 GR-ChIP in cells treated with E2 - replicate 2 7438 cells GR ChIP-Seq (+E2) r2 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123973 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123973 SRX268238 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830300 SRR830300 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830300/SRR830300.fastq.gz GSM1123973_GH313_GR_ChIP_pE2_r2.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.14.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 Estradiol for 30 minutes GSM1123972 1 GR-ChIP in cells treated with E2 - replicate 1 7438 cells GR ChIP-Seq (+E2) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123972 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123972 SRX268237 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830299 SRR830299 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830299/SRR830299.fastq.gz GSM1123972_GH251_GR_ChIP_pE2_r1.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.14.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Estradiol for 30 minutes GSM1123972 1 GR-ChIP in cells treated with E2 - replicate 1 7438 cells GR ChIP-Seq (+E2) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123972 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123972 SRX268237 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830299 SRR830299 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830299/SRR830299.fastq.gz GSM1123972_pk_RC_7438_GR_E2_sat_th10.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.14.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Estradiol for 30 minutes GSM1123971 1 GR-ChIP in cells treated with Dex - replicate 2 7438 cells GR ChIP-Seq (+Dex) r2 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123971 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123971 SRX268236 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830298 SRR830298 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830298/SRR830298.fastq.gz GSM1123971_GH312_GR_ChIP_pDex_r2.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.14.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 Dexamethasone for 30 minutes GSM1123970 1 GR-ChIP in cells treated with Dex - replicate 1 7438 cells GR ChIP-Seq (+Dex) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123970 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123970 SRX268235 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830297 SRR830297 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830297/SRR830297.fastq.gz GSM1123970_pk_RC_7438_GR_Dex_sat_th10.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.14.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Dexamethasone for 30 minutes GSM1123970 1 GR-ChIP in cells treated with Dex - replicate 1 7438 cells GR ChIP-Seq (+Dex) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123970 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123970 SRX268235 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830297 SRR830297 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830297/SRR830297.fastq.gz GSM1123970_GH250_GR_ChIP_pDex_r1.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.15.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 Dexamethasone for 30 minutes GSM1123969 1 GR-ChIP in untreated cells - replicate 2 7438 cells GR ChIP-Seq (untreated) r2 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 2 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123969 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123969 SRX268234 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830296 SRR830296 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830296/SRR830296.fastq.gz GSM1123969_GH311_GR_ChIP_unt_r2.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.15.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 2 untreated GSM1123968 1 GR-ChIP in untreated cells - replicate 1 7438 cells GR ChIP-Seq (untreated) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123968 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123968 SRX268233 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830295 SRR830295 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830295/SRR830295.fastq.gz GSM1123968_GH249_GR_ChIP_unt_r1.bedgraph ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.15.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 untreated GSM1123968 1 GR-ChIP in untreated cells - replicate 1 7438 cells GR ChIP-Seq (untreated) r1 7438 cells mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Mus musculus EFO http://purl.obolibrary.org/obo/NCBITaxon_10090 replicate 1 P-GSE46123-1 ArrayExpress P-GSE46123-2 ArrayExpress P-GSE46123-3 ArrayExpress GSM1123968 extract 1 Illumina Genome Analyzer ChIP genomic ChIP-Seq genomic DNA GSM1123968 SRX268233 Illumina Genome Analyzer (Mus musculus) sequencing assay P-GSE46123-4 ArrayExpress SRR830295 SRR830295 ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR830/SRR830295/SRR830295.fastq.gz GSM1123968_pk_RC_7438_GR_Both_sat_th10.csv ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-46123/E-GEOD-46123.processed.15.zip mouse mammary cells (express GFP-GR and Cherry-ER under a tet regulated promoter) cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz replicate 1 untreated