Source Name	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [cell type]	Characteristics [date]	Characteristics [genotype]	Characteristics [organism]	Term Source REF	Term Accession Number	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [CELL TYPE]	FactorValue [DATE]	FactorValue [GENOTYPE]
GSM1120219 1	knockout prepro	[-/-]-prepro-May2012-rep2	prepro NK cells	May 2012	Nfil3 knockout	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	P-GSE45955-2	ArrayExpress	P-GSE45955-3	ArrayExpress	P-GSE45955-4	ArrayExpress	GSM1120219 extract 1	total RNA	P-GSE45955-5	ArrayExpress	GSM1120219 LE 1	biotin	P-GSE45955-6	ArrayExpress	GSM1120219	A-GEOD-11180	ArrayExpress	array assay	P-GSE45955-7	ArrayExpress	GSM1120219_1230_2012.ga.cel	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.raw.1.zip	P-GSE45955-1	ArrayExpress	GSM1120219_sample_table.txt norm	GSM1120219_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.processed.1.zip	prepro NK cells	May 2012	Nfil3 knockout
GSM1120218 1	wild type prepro	wt-prepro-May2012-rep2	prepro NK cells	May 2012	wild type	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	P-GSE45955-2	ArrayExpress	P-GSE45955-3	ArrayExpress	P-GSE45955-4	ArrayExpress	GSM1120218 extract 1	total RNA	P-GSE45955-5	ArrayExpress	GSM1120218 LE 1	biotin	P-GSE45955-6	ArrayExpress	GSM1120218	A-GEOD-11180	ArrayExpress	array assay	P-GSE45955-7	ArrayExpress	GSM1120218_1229_2012.ga.cel	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.raw.1.zip	P-GSE45955-1	ArrayExpress	GSM1120218_sample_table.txt norm	GSM1120218_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.processed.1.zip	prepro NK cells	May 2012	wild type
GSM1120217 1	knockout ALP	[-/-]-ALP-Apr2012-rep1	ALP cells (all lymphoid progenitors)	April 2012	Nfil3 knockout	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	P-GSE45955-2	ArrayExpress	P-GSE45955-3	ArrayExpress	P-GSE45955-4	ArrayExpress	GSM1120217 extract 1	total RNA	P-GSE45955-5	ArrayExpress	GSM1120217 LE 1	biotin	P-GSE45955-6	ArrayExpress	GSM1120217	A-GEOD-11180	ArrayExpress	array assay	P-GSE45955-7	ArrayExpress	GSM1120217_1228_2012.ga.cel	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.raw.1.zip	P-GSE45955-1	ArrayExpress	GSM1120217_sample_table.txt norm	GSM1120217_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.processed.1.zip	ALP cells (all lymphoid progenitors)	April 2012	Nfil3 knockout
GSM1120216 1	wild type ALP	wt-ALP-Apr2012-rep1	ALP cells (all lymphoid progenitors)	April 2012	wild type	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	P-GSE45955-2	ArrayExpress	P-GSE45955-3	ArrayExpress	P-GSE45955-4	ArrayExpress	GSM1120216 extract 1	total RNA	P-GSE45955-5	ArrayExpress	GSM1120216 LE 1	biotin	P-GSE45955-6	ArrayExpress	GSM1120216	A-GEOD-11180	ArrayExpress	array assay	P-GSE45955-7	ArrayExpress	GSM1120216_1227_2012.ga.cel	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.raw.1.zip	P-GSE45955-1	ArrayExpress	GSM1120216_sample_table.txt norm	GSM1120216_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.processed.1.zip	ALP cells (all lymphoid progenitors)	April 2012	wild type
GSM1120215 1	knockout ALP	[-/-]-ALP-May2012-rep2	ALP cells (all lymphoid progenitors)	May 2012	Nfil3 knockout	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	P-GSE45955-2	ArrayExpress	P-GSE45955-3	ArrayExpress	P-GSE45955-4	ArrayExpress	GSM1120215 extract 1	total RNA	P-GSE45955-5	ArrayExpress	GSM1120215 LE 1	biotin	P-GSE45955-6	ArrayExpress	GSM1120215	A-GEOD-11180	ArrayExpress	array assay	P-GSE45955-7	ArrayExpress	GSM1120215_1226_2012.ga.cel	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.raw.1.zip	P-GSE45955-1	ArrayExpress	GSM1120215_sample_table.txt norm	GSM1120215_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.processed.1.zip	ALP cells (all lymphoid progenitors)	May 2012	Nfil3 knockout
GSM1120214 1	wild type ALP	wt-ALP-May2012-rep2	ALP cells (all lymphoid progenitors)	May 2012	wild type	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	P-GSE45955-2	ArrayExpress	P-GSE45955-3	ArrayExpress	P-GSE45955-4	ArrayExpress	GSM1120214 extract 1	total RNA	P-GSE45955-5	ArrayExpress	GSM1120214 LE 1	biotin	P-GSE45955-6	ArrayExpress	GSM1120214	A-GEOD-11180	ArrayExpress	array assay	P-GSE45955-7	ArrayExpress	GSM1120214_1225_2012.ga.cel	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.raw.1.zip	P-GSE45955-1	ArrayExpress	GSM1120214_sample_table.txt norm	GSM1120214_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.processed.1.zip	ALP cells (all lymphoid progenitors)	May 2012	wild type
GSM1120213 1	knockout prepro	[-/-]-prepro-Apr2012-rep1	prepro NK cells	April 2012	Nfil3 knockout	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	P-GSE45955-2	ArrayExpress	P-GSE45955-3	ArrayExpress	P-GSE45955-4	ArrayExpress	GSM1120213 extract 1	total RNA	P-GSE45955-5	ArrayExpress	GSM1120213 LE 1	biotin	P-GSE45955-6	ArrayExpress	GSM1120213	A-GEOD-11180	ArrayExpress	array assay	P-GSE45955-7	ArrayExpress	GSM1120213_1224_2012.ga.cel	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.raw.1.zip	P-GSE45955-1	ArrayExpress	GSM1120213_sample_table.txt norm	GSM1120213_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.processed.1.zip	prepro NK cells	April 2012	Nfil3 knockout
GSM1120212 1	wild type prepro	wt-prepro-Apr2012-rep1	prepro NK cells	April 2012	wild type	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	P-GSE45955-2	ArrayExpress	P-GSE45955-3	ArrayExpress	P-GSE45955-4	ArrayExpress	GSM1120212 extract 1	total RNA	P-GSE45955-5	ArrayExpress	GSM1120212 LE 1	biotin	P-GSE45955-6	ArrayExpress	GSM1120212	A-GEOD-11180	ArrayExpress	array assay	P-GSE45955-7	ArrayExpress	GSM1120212_1223_2012.ga.cel	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.raw.1.zip	P-GSE45955-1	ArrayExpress	GSM1120212_sample_table.txt norm	GSM1120212_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45955/E-GEOD-45955.processed.1.zip	prepro NK cells	April 2012	wild type