Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [Organism]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Comment [INSTRUMENT_MODEL]	Comment [LIBRARY_SELECTION]	Comment [LIBRARY_SOURCE]	Comment [LIBRARY_STRATEGY]	Material Type	Assay Name	Comment [ENA_EXPERIMENT]	Comment [Platform_title]	Technology Type	Protocol REF	Term Source REF	Scan Name	Comment [ENA_RUN]	Comment [FASTQ_URI]	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [TREATMENT]
GSM1101892 1	Indexed and sequenced on Illumina HiSeq sharing with seven other samples in one lane	Shewanella sp MR-7 grown in D,L-lactate medium till mid-log-phase	MR7 MM	Shewanella sp. MR-7	P-GSE45315-1	ArrayExpress	P-GSE45315-2	ArrayExpress	GSM1101892 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1101892	SRX252376	Illumina HiSeq 2000 (Shewanella sp. MR-7)	sequencing assay	P-GSE45315-3	ArrayExpress	SRR786959	SRR786959	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR786/SRR786959/SRR786959.fastq.gz	GSM1101892_RNASeq5_MR7_MM_megaplasmid_REV.wig	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45315/E-GEOD-45315.processed.1.zip	20 mM D,L-lactate, 30 mM PIPES, salts (1.5 g/L NH4Cl, 0.1 g/L KCl, 1.75 g/L NaCl, 0.61 g/L MgCl2.6H20, 0.6 g/L NaH2PO4, Wolfe's vitamins, and Wolfe's minerals, at pH 7
GSM1101892 1	Indexed and sequenced on Illumina HiSeq sharing with seven other samples in one lane	Shewanella sp MR-7 grown in D,L-lactate medium till mid-log-phase	MR7 MM	Shewanella sp. MR-7	P-GSE45315-1	ArrayExpress	P-GSE45315-2	ArrayExpress	GSM1101892 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1101892	SRX252376	Illumina HiSeq 2000 (Shewanella sp. MR-7)	sequencing assay	P-GSE45315-3	ArrayExpress	SRR786959	SRR786959	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR786/SRR786959/SRR786959.fastq.gz	GSM1101892_RNASeq5_MR7_MM_megaplasmid_FWD.wig	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45315/E-GEOD-45315.processed.1.zip	20 mM D,L-lactate, 30 mM PIPES, salts (1.5 g/L NH4Cl, 0.1 g/L KCl, 1.75 g/L NaCl, 0.61 g/L MgCl2.6H20, 0.6 g/L NaH2PO4, Wolfe's vitamins, and Wolfe's minerals, at pH 7
GSM1101892 1	Indexed and sequenced on Illumina HiSeq sharing with seven other samples in one lane	Shewanella sp MR-7 grown in D,L-lactate medium till mid-log-phase	MR7 MM	Shewanella sp. MR-7	P-GSE45315-1	ArrayExpress	P-GSE45315-2	ArrayExpress	GSM1101892 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1101892	SRX252376	Illumina HiSeq 2000 (Shewanella sp. MR-7)	sequencing assay	P-GSE45315-3	ArrayExpress	SRR786959	SRR786959	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR786/SRR786959/SRR786959.fastq.gz	GSM1101892_RNASeq5_MR7_MM_main_chromosome_REV.wig	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45315/E-GEOD-45315.processed.1.zip	20 mM D,L-lactate, 30 mM PIPES, salts (1.5 g/L NH4Cl, 0.1 g/L KCl, 1.75 g/L NaCl, 0.61 g/L MgCl2.6H20, 0.6 g/L NaH2PO4, Wolfe's vitamins, and Wolfe's minerals, at pH 7
GSM1101892 1	Indexed and sequenced on Illumina HiSeq sharing with seven other samples in one lane	Shewanella sp MR-7 grown in D,L-lactate medium till mid-log-phase	MR7 MM	Shewanella sp. MR-7	P-GSE45315-1	ArrayExpress	P-GSE45315-2	ArrayExpress	GSM1101892 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1101892	SRX252376	Illumina HiSeq 2000 (Shewanella sp. MR-7)	sequencing assay	P-GSE45315-3	ArrayExpress	SRR786959	SRR786959	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR786/SRR786959/SRR786959.fastq.gz	GSM1101892_RNASeq5_MR7_MM_main_chromosome_FWD.wig	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45315/E-GEOD-45315.processed.1.zip	20 mM D,L-lactate, 30 mM PIPES, salts (1.5 g/L NH4Cl, 0.1 g/L KCl, 1.75 g/L NaCl, 0.61 g/L MgCl2.6H20, 0.6 g/L NaH2PO4, Wolfe's vitamins, and Wolfe's minerals, at pH 7
GSM1101891 1	Indexed and sequenced on Illumina HiSeq sharing with seven other samples in one lane	Shewanella sp MR-7 grown in LB till mid-log-phase	MR7 LB	Shewanella sp. MR-7	P-GSE45315-1	ArrayExpress	P-GSE45315-2	ArrayExpress	GSM1101891 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1101891	SRX252375	Illumina HiSeq 2000 (Shewanella sp. MR-7)	sequencing assay	P-GSE45315-3	ArrayExpress	SRR786958	SRR786958	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR786/SRR786958/SRR786958.fastq.gz	GSM1101891_RNASeq5_MR7_LB_main_chromosome_FWD.wig	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45315/E-GEOD-45315.processed.1.zip	Luria-Bertani broth (LB)
GSM1101891 1	Indexed and sequenced on Illumina HiSeq sharing with seven other samples in one lane	Shewanella sp MR-7 grown in LB till mid-log-phase	MR7 LB	Shewanella sp. MR-7	P-GSE45315-1	ArrayExpress	P-GSE45315-2	ArrayExpress	GSM1101891 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1101891	SRX252375	Illumina HiSeq 2000 (Shewanella sp. MR-7)	sequencing assay	P-GSE45315-3	ArrayExpress	SRR786958	SRR786958	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR786/SRR786958/SRR786958.fastq.gz	GSM1101891_RNASeq5_MR7_LB_main_chromosome_REV.wig	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45315/E-GEOD-45315.processed.1.zip	Luria-Bertani broth (LB)
GSM1101891 1	Indexed and sequenced on Illumina HiSeq sharing with seven other samples in one lane	Shewanella sp MR-7 grown in LB till mid-log-phase	MR7 LB	Shewanella sp. MR-7	P-GSE45315-1	ArrayExpress	P-GSE45315-2	ArrayExpress	GSM1101891 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1101891	SRX252375	Illumina HiSeq 2000 (Shewanella sp. MR-7)	sequencing assay	P-GSE45315-3	ArrayExpress	SRR786958	SRR786958	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR786/SRR786958/SRR786958.fastq.gz	GSM1101891_RNASeq5_MR7_LB_megaplasmid_REV.wig	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45315/E-GEOD-45315.processed.1.zip	Luria-Bertani broth (LB)
GSM1101891 1	Indexed and sequenced on Illumina HiSeq sharing with seven other samples in one lane	Shewanella sp MR-7 grown in LB till mid-log-phase	MR7 LB	Shewanella sp. MR-7	P-GSE45315-1	ArrayExpress	P-GSE45315-2	ArrayExpress	GSM1101891 extract 1	Illumina HiSeq 2000	cDNA	transcriptomic	RNA-Seq	total RNA	GSM1101891	SRX252375	Illumina HiSeq 2000 (Shewanella sp. MR-7)	sequencing assay	P-GSE45315-3	ArrayExpress	SRR786958	SRR786958	ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR786/SRR786958/SRR786958.fastq.gz	GSM1101891_RNASeq5_MR7_LB_megaplasmid_FWD.wig	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-45315/E-GEOD-45315.processed.1.zip	Luria-Bertani broth (LB)