Source Name Comment [Sample_description] Comment [Sample_source_name] Comment [Sample_title] Characteristics [organism] Term Source REF Term Accession Number Characteristics [organism part] Term Source REF Term Accession Number Characteristics [sample type] Term Source REF Term Accession Number Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [ORGANISM PART] Term Source REF Term Accession Number FactorValue [SAMPLE TYPE] Term Source REF Term Accession Number GSM1067343 1 Synovial sarcoma Patient 2430-90 vol 2011 Sample 2430-90 vol 2011 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067343 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067343 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067343 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067343_20110908A03_366770_2um_grid_2430-90.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.1.zip P-GSE43632-1 ArrayExpress GSM1067343_sample_table.txt norm GSM1067343_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 GSM1067342 1 Low grade fibromyxoid sarcoma Patient 244-09 Sample 244-09 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 Low grade fibromyxoid sarcoma Low grade fibromyxoid sarcoma P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067342 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067342 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067342 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067342_20110908A03_366759_2um_grid_244-09.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.1.zip P-GSE43632-1 ArrayExpress GSM1067342_sample_table.txt norm GSM1067342_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip Low grade fibromyxoid sarcoma Low grade fibromyxoid sarcoma GSM1067341 1 Myxoid liposarcoma Patient 3214 vol 2011 Sample 3214 vol 2011 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 myxoid liposarcoma EFO EFO_0000613 myxoid liposarcoma EFO EFO_0000613 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067341 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067341 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067341 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067341_20110908A02_366770_2um_grid_3214.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.1.zip P-GSE43632-1 ArrayExpress GSM1067341_sample_table.txt norm GSM1067341_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip myxoid liposarcoma EFO EFO_0000613 myxoid liposarcoma EFO EFO_0000613 GSM1067340 1 Ewing sarcoma Patient 2492-08 Sample 2492-08 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 Ewing sarcoma EFO EFO_0000174 Ewing sarcoma EFO EFO_0000174 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067340 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067340 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067340 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067340_20110908A02_366759_2um_grid_2492-08.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.1.zip P-GSE43632-1 ArrayExpress GSM1067340_sample_table.txt norm GSM1067340_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip Ewing sarcoma EFO EFO_0000174 Ewing sarcoma EFO EFO_0000174 GSM1067339 1 Low grade fibromyxoid sarcoma Patient 3490-00 Sample 3490-00 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 Low grade fibromyxoid sarcoma Low grade fibromyxoid sarcoma P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067339 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067339 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067339 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067339_20110908A01_366770_2um_grid_3490-00.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.1.zip P-GSE43632-1 ArrayExpress GSM1067339_sample_table.txt norm GSM1067339_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip Low grade fibromyxoid sarcoma Low grade fibromyxoid sarcoma GSM1067338 1 Myxoid liposarcoma Patient 885-89 Sample 885-89 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 myxoid liposarcoma EFO EFO_0000613 myxoid liposarcoma EFO EFO_0000613 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067338 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067338 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067338 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067338_20110908A01_366759_2um_grid_885-89.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.1.zip P-GSE43632-1 ArrayExpress GSM1067338_sample_table.txt norm GSM1067338_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip myxoid liposarcoma EFO EFO_0000613 myxoid liposarcoma EFO EFO_0000613 GSM1067337 1 Ewing sarcoma Patient 10908 Sample 10908 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 Ewing sarcoma EFO EFO_0000174 Ewing sarcoma EFO EFO_0000174 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067337 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067337 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067337 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067337_20100112A03_366693_2um_grid_10908.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.1.zip P-GSE43632-1 ArrayExpress GSM1067337_sample_table.txt norm GSM1067337_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip Ewing sarcoma EFO EFO_0000174 Ewing sarcoma EFO EFO_0000174 GSM1067336 1 Ewing sarcoma Patient 4640 Sample 4640 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 Ewing sarcoma EFO EFO_0000174 Ewing sarcoma EFO EFO_0000174 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067336 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067336 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067336 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067336_20100112A03_366602_2um_grid_4640.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.1.zip P-GSE43632-1 ArrayExpress GSM1067336_sample_table.txt norm GSM1067336_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip Ewing sarcoma EFO EFO_0000174 Ewing sarcoma EFO EFO_0000174 GSM1067335 1 Alveolar rhabdomysarcoma Patient 14319 Sample 14319 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 alveolar rhabdomyosarcoma EFO EFO_0000248 alveolar rhabdomyosarcoma EFO EFO_0000248 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067335 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067335 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067335 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067335_20100112A02_366693_2um_grid_14319.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.2.zip P-GSE43632-1 ArrayExpress GSM1067335_sample_table.txt norm GSM1067335_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip alveolar rhabdomyosarcoma EFO EFO_0000248 alveolar rhabdomyosarcoma EFO EFO_0000248 GSM1067334 1 Synovial sarcoma Patient 6499 Sample 6499 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067334 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067334 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067334 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067334_20100112A02_366602_2um_grid_6499.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.2.zip P-GSE43632-1 ArrayExpress GSM1067334_sample_table.txt norm GSM1067334_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 GSM1067333 1 Ewing sarcoma Patient 14476 Sample 14476 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 Ewing sarcoma EFO EFO_0000174 Ewing sarcoma EFO EFO_0000174 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067333 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067333 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067333 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067333_20100112A01_366693_2um_grid_14476.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.2.zip P-GSE43632-1 ArrayExpress GSM1067333_sample_table.txt norm GSM1067333_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip Ewing sarcoma EFO EFO_0000174 Ewing sarcoma EFO EFO_0000174 GSM1067332 1 Synovial sarcoma Patient 9972 Sample 9972 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067332 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067332 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067332 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067332_20100112A01_366602_2um_grid_9972.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.2.zip P-GSE43632-1 ArrayExpress GSM1067332_sample_table.txt norm GSM1067332_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 GSM1067331 1 Myxoid liposarcoma Patient 3214 vol 2009 Sample 3214 vol 2009 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 myxoid liposarcoma EFO EFO_0000613 myxoid liposarcoma EFO EFO_0000613 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067331 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067331 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067331 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067331_20091023A03_356356_2um_grid_3214.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.2.zip P-GSE43632-1 ArrayExpress GSM1067331_sample_table.txt norm GSM1067331_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip myxoid liposarcoma EFO EFO_0000613 myxoid liposarcoma EFO EFO_0000613 GSM1067330 1 Synovial sarcoma Patient 2430-90 vol 2009 Sample 2430-90 vol 2009 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067330 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067330 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067330 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067330_20091023A02_356356_2um_grid_2430-90.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.2.zip P-GSE43632-1 ArrayExpress GSM1067330_sample_table.txt norm GSM1067330_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 GSM1067329 1 Extraskeletal myxoid chondrosarcoma Patient 168-97 Sample 168-97 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 Extraskeletal myxoid chondrosarcoma Extraskeletal myxoid chondrosarcoma P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067329 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067329 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067329 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067329_20091023A01_356356_2um_grid_168-97.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.2.zip P-GSE43632-1 ArrayExpress GSM1067329_sample_table.txt norm GSM1067329_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip Extraskeletal myxoid chondrosarcoma Extraskeletal myxoid chondrosarcoma GSM1067328 1 Synovial sarcoma Patient 3065 Sample 3065 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067328 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067328 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067328 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067328_20091012A03_356357_2um_grid_3065.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.2.zip P-GSE43632-1 ArrayExpress GSM1067328_sample_table.txt norm GSM1067328_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 GSM1067327 1 Synovial sarcoma Patient 7757 Sample 7757 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067327 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067327 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067327 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067327_20091012A02_356357_2um_grid_7757.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.2.zip P-GSE43632-1 ArrayExpress GSM1067327_sample_table.txt norm GSM1067327_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip synovial sarcoma EFO EFO_0001376 synovial sarcoma EFO EFO_0001376 GSM1067326 1 Negative Patient 10408 Sample 10408 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 fibrosarcoma EFO EFO_0002087 Negative P-GSE43632-2 ArrayExpress P-GSE43632-3 ArrayExpress GSM1067326 extract 1 total RNA P-GSE43632-4 ArrayExpress GSM1067326 LE 1 Cy3 P-GSE43632-5 ArrayExpress GSM1067326 A-GEOD-11054 ArrayExpress array assay P-GSE43632-6 ArrayExpress GSM1067326_20091012A01_356357_2um_grid_10408.pair ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.raw.3.zip P-GSE43632-1 ArrayExpress GSM1067326_sample_table.txt norm GSM1067326_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43632/E-GEOD-43632.processed.1.zip fibrosarcoma EFO EFO_0002087 Negative