Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [Organism]	Term Source REF	Term Accession Number	Characteristics [cell line]	Characteristics [organism part]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [CELL LINE]
GSM1070870 1	  	human iPS cell line C2 (age- and sex-matched healthy control person for L2) differentiated for 30 days	C2 mDAN	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	C2 (age- and sex-matched healthy control person for L2)	midbrain dopaminergic neurons	P-GSE43364-2	ArrayExpress	P-GSE43364-3	ArrayExpress	GSM1070870 extract 1	total RNA	P-GSE43364-4	ArrayExpress	GSM1070870 LE 1	biotin	P-GSE43364-5	ArrayExpress	GSM1070870	A-GEOD-10558	ArrayExpress	array assay	P-GSE43364-1	ArrayExpress	P-GSE43364-6	ArrayExpress	P-GSE43364-7	ArrayExpress	GSM1070870_sample_table.txt norm	GSM1070870_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43364/E-GEOD-43364.processed.1.zip	C2 (age- and sex-matched healthy control person for L2)
GSM1070869 1	  	human iPS cell line C1-1 (age- and sex-matched healthy control person for L1) differentiated for 30 days	C1-1 mDAN	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	C1-1 (age- and sex-matched healthy control person for L1)	midbrain dopaminergic neurons	P-GSE43364-2	ArrayExpress	P-GSE43364-3	ArrayExpress	GSM1070869 extract 1	total RNA	P-GSE43364-4	ArrayExpress	GSM1070869 LE 1	biotin	P-GSE43364-5	ArrayExpress	GSM1070869	A-GEOD-10558	ArrayExpress	array assay	P-GSE43364-1	ArrayExpress	P-GSE43364-6	ArrayExpress	P-GSE43364-7	ArrayExpress	GSM1070869_sample_table.txt norm	GSM1070869_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43364/E-GEOD-43364.processed.1.zip	C1-1 (age- and sex-matched healthy control person for L1)
GSM1061031 1	midbrain dopaminergic neurons derived from human iPS cells	human iPS cell line L2-3GC (isogenic to L2-3Mut) carrying the LRRK2 WT allele differentiated for 30 days	L2-3GC mDAN	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	L2-3GC (isogenic to L2-3Mut) carrying the LRRK2 WT allele	midbrain dopaminergic neurons	P-GSE43364-2	ArrayExpress	P-GSE43364-3	ArrayExpress	GSM1061031 extract 1	total RNA	P-GSE43364-4	ArrayExpress	GSM1061031 LE 1	biotin	P-GSE43364-5	ArrayExpress	GSM1061031	A-GEOD-10558	ArrayExpress	array assay	P-GSE43364-1	ArrayExpress	P-GSE43364-6	ArrayExpress	P-GSE43364-7	ArrayExpress	GSM1061031_sample_table.txt norm	GSM1061031_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43364/E-GEOD-43364.processed.1.zip	L2-3GC (isogenic to L2-3Mut) carrying the LRRK2 WT allele
GSM1061030 1	midbrain dopaminergic neurons derived from human iPS cells	human iPS cell line L2-3Mut carrying the LRRK2 G2019S mutation differentiated for 30 days	L2-3Mut mDAN	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	L2-3Mut carrying the LRRK2 G2019S mutation	midbrain dopaminergic neurons	P-GSE43364-2	ArrayExpress	P-GSE43364-3	ArrayExpress	GSM1061030 extract 1	total RNA	P-GSE43364-4	ArrayExpress	GSM1061030 LE 1	biotin	P-GSE43364-5	ArrayExpress	GSM1061030	A-GEOD-10558	ArrayExpress	array assay	P-GSE43364-1	ArrayExpress	P-GSE43364-6	ArrayExpress	P-GSE43364-7	ArrayExpress	GSM1061030_sample_table.txt norm	GSM1061030_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43364/E-GEOD-43364.processed.1.zip	L2-3Mut carrying the LRRK2 G2019S mutation
GSM1061029 1	midbrain dopaminergic neurons derived from human iPS cells	human iPS cell line L2-2GC (isogenic to L2-2Mut) carrying the LRRK2 WT allele differentiated for 30 days	L2-2GC mDAN	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	L2-2GC (isogenic to L2-2Mut) carrying the LRRK2 WT allele	midbrain dopaminergic neurons	P-GSE43364-2	ArrayExpress	P-GSE43364-3	ArrayExpress	GSM1061029 extract 1	total RNA	P-GSE43364-4	ArrayExpress	GSM1061029 LE 1	biotin	P-GSE43364-5	ArrayExpress	GSM1061029	A-GEOD-10558	ArrayExpress	array assay	P-GSE43364-1	ArrayExpress	P-GSE43364-6	ArrayExpress	P-GSE43364-7	ArrayExpress	GSM1061029_sample_table.txt norm	GSM1061029_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43364/E-GEOD-43364.processed.1.zip	L2-2GC (isogenic to L2-2Mut) carrying the LRRK2 WT allele
GSM1061028 1	midbrain dopaminergic neurons derived from human iPS cells	human iPS cell line L2-2Mut carrying the LRRK2 G2019S mutation differentiated for 30 days	L2-2Mut mDAN	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	L2-2Mut carrying the LRRK2 G2019S mutation	midbrain dopaminergic neurons	P-GSE43364-2	ArrayExpress	P-GSE43364-3	ArrayExpress	GSM1061028 extract 1	total RNA	P-GSE43364-4	ArrayExpress	GSM1061028 LE 1	biotin	P-GSE43364-5	ArrayExpress	GSM1061028	A-GEOD-10558	ArrayExpress	array assay	P-GSE43364-1	ArrayExpress	P-GSE43364-6	ArrayExpress	P-GSE43364-7	ArrayExpress	GSM1061028_sample_table.txt norm	GSM1061028_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43364/E-GEOD-43364.processed.1.zip	L2-2Mut carrying the LRRK2 G2019S mutation
GSM1061027 1	midbrain dopaminergic neurons derived from human iPS cells	human iPS cell line L1-1GC2 (isogenic to L1-1Mut) carrying the LRRK2 WT allele differentiated for 30 days	L1-1GC2 mDAN	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	L1-1GC2 (isogenic to L1-1Mut) carrying the LRRK2 WT allele	midbrain dopaminergic neurons	P-GSE43364-2	ArrayExpress	P-GSE43364-3	ArrayExpress	GSM1061027 extract 1	total RNA	P-GSE43364-4	ArrayExpress	GSM1061027 LE 1	biotin	P-GSE43364-5	ArrayExpress	GSM1061027	A-GEOD-10558	ArrayExpress	array assay	P-GSE43364-1	ArrayExpress	P-GSE43364-6	ArrayExpress	P-GSE43364-7	ArrayExpress	GSM1061027_sample_table.txt norm	GSM1061027_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43364/E-GEOD-43364.processed.1.zip	L1-1GC2 (isogenic to L1-1Mut) carrying the LRRK2 WT allele
GSM1061026 1	midbrain dopaminergic neurons derived from human iPS cells	human iPS cell line L1-1Mut carrying the LRRK2 G2019S mutation differentiated for 30 days	L1-1Mut mDAN	Homo sapiens	EFO	http://purl.obolibrary.org/obo/NCBITaxon_9606	L1-1Mut carrying the LRRK2 G2019S mutation	midbrain dopaminergic neurons	P-GSE43364-2	ArrayExpress	P-GSE43364-3	ArrayExpress	GSM1061026 extract 1	total RNA	P-GSE43364-4	ArrayExpress	GSM1061026 LE 1	biotin	P-GSE43364-5	ArrayExpress	GSM1061026	A-GEOD-10558	ArrayExpress	array assay	P-GSE43364-1	ArrayExpress	P-GSE43364-6	ArrayExpress	P-GSE43364-7	ArrayExpress	GSM1061026_sample_table.txt norm	GSM1061026_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-43364/E-GEOD-43364.processed.1.zip	L1-1Mut carrying the LRRK2 G2019S mutation