Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [Organism]	Term Source REF	Term Accession Number	Characteristics [variation]	Term Source REF	Term Accession Number	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Hybridization Name	Array Design REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [VARIATION]	Term Source REF	Term Accession Number
GSM1027068 1	TSPAN12KD2	tumor	MFP tumor from TSPAN12 KD cells 2	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	TSPAN12 Knockdown	  	  	P-GSE41892-2	ArrayExpress	P-GSE41892-3	ArrayExpress	P-GSE41892-4	ArrayExpress	GSM1027068 extract 1	total RNA	P-GSE41892-5	ArrayExpress	GSM1027068 LE 1	biotin	P-GSE41892-6	ArrayExpress	GSM1027068	A-AFFY-37	ArrayExpress	P-GSE41892-7	ArrayExpress	P-GSE41892-8	ArrayExpress	GSM1027068_HM2012053055.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41892/E-GEOD-41892.raw.1.zip	P-GSE41892-1	ArrayExpress	GSM1027068_sample_table.txt norm	GSM1027068_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41892/E-GEOD-41892.processed.1.zip	TSPAN12 Knockdown	  	        
GSM1027067 1	TSPAN12KD1	tumor	MFP tumor from TSPAN12 KD cells 1	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	TSPAN12 Knockdown	  	  	P-GSE41892-2	ArrayExpress	P-GSE41892-3	ArrayExpress	P-GSE41892-4	ArrayExpress	GSM1027067 extract 1	total RNA	P-GSE41892-5	ArrayExpress	GSM1027067 LE 1	biotin	P-GSE41892-6	ArrayExpress	GSM1027067	A-AFFY-37	ArrayExpress	P-GSE41892-7	ArrayExpress	P-GSE41892-8	ArrayExpress	GSM1027067_HM2012053054.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41892/E-GEOD-41892.raw.1.zip	P-GSE41892-1	ArrayExpress	GSM1027067_sample_table.txt norm	GSM1027067_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41892/E-GEOD-41892.processed.1.zip	TSPAN12 Knockdown	  	        
GSM1027066 1	Control2	tumor	MFP tumor from Control cells 2	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	control	EFO	EFO_0001461	P-GSE41892-2	ArrayExpress	P-GSE41892-3	ArrayExpress	P-GSE41892-4	ArrayExpress	GSM1027066 extract 1	total RNA	P-GSE41892-5	ArrayExpress	GSM1027066 LE 1	biotin	P-GSE41892-6	ArrayExpress	GSM1027066	A-AFFY-37	ArrayExpress	P-GSE41892-7	ArrayExpress	P-GSE41892-8	ArrayExpress	GSM1027066_HM2012053053.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41892/E-GEOD-41892.raw.1.zip	P-GSE41892-1	ArrayExpress	GSM1027066_sample_table.txt norm	GSM1027066_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41892/E-GEOD-41892.processed.1.zip	control	EFO	EFO_0001461
GSM1027065 1	Control1	tumor	MFP tumor from Control cells 1	Homo sapiens	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_9606	control	EFO	EFO_0001461	P-GSE41892-2	ArrayExpress	P-GSE41892-3	ArrayExpress	P-GSE41892-4	ArrayExpress	GSM1027065 extract 1	total RNA	P-GSE41892-5	ArrayExpress	GSM1027065 LE 1	biotin	P-GSE41892-6	ArrayExpress	GSM1027065	A-AFFY-37	ArrayExpress	P-GSE41892-7	ArrayExpress	P-GSE41892-8	ArrayExpress	GSM1027065_HM2012053052.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41892/E-GEOD-41892.raw.1.zip	P-GSE41892-1	ArrayExpress	GSM1027065_sample_table.txt norm	GSM1027065_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-41892/E-GEOD-41892.processed.1.zip	control	EFO	EFO_0001461