Source Name	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [growth condition]	Characteristics [organism]	Term Source REF	Term Accession Number	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [GROWTH CONDITION]
GSM991075 1	SHX 30min.	exponential E. coli after SHX rep2	SHX 30min.	Escherichia coli str. K-12 substr. MG1655	EFO	http://purl.obolibrary.org/obo/NCBITaxon_511145	P-GSE40304-2	ArrayExpress	P-GSE40304-3	ArrayExpress	P-GSE40304-4	ArrayExpress	GSM991075 extract 1	total RNA	P-GSE40304-5	ArrayExpress	GSM991075 LE 1	Cy3	P-GSE40304-6	ArrayExpress	GSM991075	A-GEOD-10046	ArrayExpress	array assay	P-GSE40304-7	ArrayExpress	GSM991075_68597205_532_norm_RMA.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.raw.1.zip	P-GSE40304-1	ArrayExpress	GSM991075_sample_table.txt norm	GSM991075_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.processed.1.zip	SHX 30min.
GSM991075 1	SHX 30min.	exponential E. coli after SHX rep2	SHX 30min.	Escherichia coli str. K-12 substr. MG1655	EFO	http://purl.obolibrary.org/obo/NCBITaxon_511145	P-GSE40304-2	ArrayExpress	P-GSE40304-3	ArrayExpress	P-GSE40304-4	ArrayExpress	GSM991075 extract 1	total RNA	P-GSE40304-5	ArrayExpress	GSM991075 LE 1	Cy3	P-GSE40304-6	ArrayExpress	GSM991075	A-GEOD-10046	ArrayExpress	array assay	P-GSE40304-7	ArrayExpress	GSM991075_68597205_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.raw.1.zip	P-GSE40304-1	ArrayExpress	GSM991075_sample_table.txt norm	GSM991075_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.processed.1.zip	SHX 30min.
GSM991074 1	SHX 30min.	exponential E. coli after SHX rep1	SHX 30min.	Escherichia coli str. K-12 substr. MG1655	EFO	http://purl.obolibrary.org/obo/NCBITaxon_511145	P-GSE40304-2	ArrayExpress	P-GSE40304-3	ArrayExpress	P-GSE40304-4	ArrayExpress	GSM991074 extract 1	total RNA	P-GSE40304-5	ArrayExpress	GSM991074 LE 1	Cy3	P-GSE40304-6	ArrayExpress	GSM991074	A-GEOD-10046	ArrayExpress	array assay	P-GSE40304-7	ArrayExpress	GSM991074_68692805_532_norm_RMA.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.raw.1.zip	P-GSE40304-1	ArrayExpress	GSM991074_sample_table.txt norm	GSM991074_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.processed.1.zip	SHX 30min.
GSM991074 1	SHX 30min.	exponential E. coli after SHX rep1	SHX 30min.	Escherichia coli str. K-12 substr. MG1655	EFO	http://purl.obolibrary.org/obo/NCBITaxon_511145	P-GSE40304-2	ArrayExpress	P-GSE40304-3	ArrayExpress	P-GSE40304-4	ArrayExpress	GSM991074 extract 1	total RNA	P-GSE40304-5	ArrayExpress	GSM991074 LE 1	Cy3	P-GSE40304-6	ArrayExpress	GSM991074	A-GEOD-10046	ArrayExpress	array assay	P-GSE40304-7	ArrayExpress	GSM991074_68692805_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.raw.1.zip	P-GSE40304-1	ArrayExpress	GSM991074_sample_table.txt norm	GSM991074_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.processed.1.zip	SHX 30min.
GSM991073 1	exp. phase	exponential E. coli in LB rep2	exp. phase	Escherichia coli str. K-12 substr. MG1655	EFO	http://purl.obolibrary.org/obo/NCBITaxon_511145	P-GSE40304-2	ArrayExpress	P-GSE40304-3	ArrayExpress	P-GSE40304-4	ArrayExpress	GSM991073 extract 1	total RNA	P-GSE40304-5	ArrayExpress	GSM991073 LE 1	Cy3	P-GSE40304-6	ArrayExpress	GSM991073	A-GEOD-10046	ArrayExpress	array assay	P-GSE40304-7	ArrayExpress	GSM991073_68597105_532_norm_RMA.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.raw.1.zip	P-GSE40304-1	ArrayExpress	GSM991073_sample_table.txt norm	GSM991073_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.processed.1.zip	exp. phase
GSM991073 1	exp. phase	exponential E. coli in LB rep2	exp. phase	Escherichia coli str. K-12 substr. MG1655	EFO	http://purl.obolibrary.org/obo/NCBITaxon_511145	P-GSE40304-2	ArrayExpress	P-GSE40304-3	ArrayExpress	P-GSE40304-4	ArrayExpress	GSM991073 extract 1	total RNA	P-GSE40304-5	ArrayExpress	GSM991073 LE 1	Cy3	P-GSE40304-6	ArrayExpress	GSM991073	A-GEOD-10046	ArrayExpress	array assay	P-GSE40304-7	ArrayExpress	GSM991073_68597105_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.raw.1.zip	P-GSE40304-1	ArrayExpress	GSM991073_sample_table.txt norm	GSM991073_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.processed.1.zip	exp. phase
GSM991072 1	exp. Phase	exponential E. coli in LB rep1	exp. Phase	Escherichia coli str. K-12 substr. MG1655	EFO	http://purl.obolibrary.org/obo/NCBITaxon_511145	P-GSE40304-2	ArrayExpress	P-GSE40304-3	ArrayExpress	P-GSE40304-4	ArrayExpress	GSM991072 extract 1	total RNA	P-GSE40304-5	ArrayExpress	GSM991072 LE 1	Cy3	P-GSE40304-6	ArrayExpress	GSM991072	A-GEOD-10046	ArrayExpress	array assay	P-GSE40304-7	ArrayExpress	GSM991072_68597305_532_norm_RMA.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.raw.1.zip	P-GSE40304-1	ArrayExpress	GSM991072_sample_table.txt norm	GSM991072_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.processed.1.zip	exp. Phase
GSM991072 1	exp. Phase	exponential E. coli in LB rep1	exp. Phase	Escherichia coli str. K-12 substr. MG1655	EFO	http://purl.obolibrary.org/obo/NCBITaxon_511145	P-GSE40304-2	ArrayExpress	P-GSE40304-3	ArrayExpress	P-GSE40304-4	ArrayExpress	GSM991072 extract 1	total RNA	P-GSE40304-5	ArrayExpress	GSM991072 LE 1	Cy3	P-GSE40304-6	ArrayExpress	GSM991072	A-GEOD-10046	ArrayExpress	array assay	P-GSE40304-7	ArrayExpress	GSM991072_68597305_532.pair	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.raw.1.zip	P-GSE40304-1	ArrayExpress	GSM991072_sample_table.txt norm	GSM991072_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40304/E-GEOD-40304.processed.1.zip	exp. Phase