Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [age]	Characteristics [genotype]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [organism part]	Term Source REF	Term Accession Number	Characteristics [sex]	Term Source REF	Term Accession Number	Characteristics [strain]	Term Source REF	Term Accession Number	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [genotype]
GSM984790 1	knock-out 4	mouse liver, Amacr-/-	Amacr-/- mouse liver, biological rep4	3-3.5 months	Amacr-/-	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	liver	EFO	http://purl.obolibrary.org/obo/UBERON_0002107	male	EFO	http://purl.obolibrary.org/obo/PATO_0000384	C57BL/6	EFO	EFO_0004472	P-GSE40085-2	ArrayExpress	GSM984790 extract 1	total RNA	P-GSE40085-3	ArrayExpress	GSM984790 LE 1	biotin	P-GSE40085-4	ArrayExpress	GSM984790	A-GEOD-14661	ArrayExpress	array assay	P-GSE40085-5	ArrayExpress	GSM984790_ko-normal4.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.raw.1.zip	P-GSE40085-1	ArrayExpress	GSM984790_sample_table.txt norm	GSM984790_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.processed.1.zip	Amacr-/-
GSM984789 1	knock-out 3	mouse liver, Amacr-/-	Amacr-/- mouse liver, biological rep3	3-3.5 months	Amacr-/-	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	liver	EFO	http://purl.obolibrary.org/obo/UBERON_0002107	male	EFO	http://purl.obolibrary.org/obo/PATO_0000384	C57BL/6	EFO	EFO_0004472	P-GSE40085-2	ArrayExpress	GSM984789 extract 1	total RNA	P-GSE40085-3	ArrayExpress	GSM984789 LE 1	biotin	P-GSE40085-4	ArrayExpress	GSM984789	A-GEOD-14661	ArrayExpress	array assay	P-GSE40085-5	ArrayExpress	GSM984789_ko-normal3.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.raw.1.zip	P-GSE40085-1	ArrayExpress	GSM984789_sample_table.txt norm	GSM984789_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.processed.1.zip	Amacr-/-
GSM984788 1	knock-out 2	mouse liver, Amacr-/-	Amacr-/- mouse liver, biological rep2	3-3.5 months	Amacr-/-	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	liver	EFO	http://purl.obolibrary.org/obo/UBERON_0002107	male	EFO	http://purl.obolibrary.org/obo/PATO_0000384	C57BL/6	EFO	EFO_0004472	P-GSE40085-2	ArrayExpress	GSM984788 extract 1	total RNA	P-GSE40085-3	ArrayExpress	GSM984788 LE 1	biotin	P-GSE40085-4	ArrayExpress	GSM984788	A-GEOD-14661	ArrayExpress	array assay	P-GSE40085-5	ArrayExpress	GSM984788_ko-normal2.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.raw.1.zip	P-GSE40085-1	ArrayExpress	GSM984788_sample_table.txt norm	GSM984788_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.processed.1.zip	Amacr-/-
GSM984787 1	knock-out 1	mouse liver, Amacr-/-	Amacr-/- mouse liver, biological rep1	3-3.5 months	Amacr-/-	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	liver	EFO	http://purl.obolibrary.org/obo/UBERON_0002107	male	EFO	http://purl.obolibrary.org/obo/PATO_0000384	C57BL/6	EFO	EFO_0004472	P-GSE40085-2	ArrayExpress	GSM984787 extract 1	total RNA	P-GSE40085-3	ArrayExpress	GSM984787 LE 1	biotin	P-GSE40085-4	ArrayExpress	GSM984787	A-GEOD-14661	ArrayExpress	array assay	P-GSE40085-5	ArrayExpress	GSM984787_ko-normal1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.raw.1.zip	P-GSE40085-1	ArrayExpress	GSM984787_sample_table.txt norm	GSM984787_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.processed.1.zip	Amacr-/-
GSM984786 1	wildtype 4	mouse liver, wild-type	wild-type mouse liver, biological rep4	3-3.5 months	wild-type	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	liver	EFO	http://purl.obolibrary.org/obo/UBERON_0002107	male	EFO	http://purl.obolibrary.org/obo/PATO_0000384	C57BL/6	EFO	EFO_0004472	P-GSE40085-2	ArrayExpress	GSM984786 extract 1	total RNA	P-GSE40085-3	ArrayExpress	GSM984786 LE 1	biotin	P-GSE40085-4	ArrayExpress	GSM984786	A-GEOD-14661	ArrayExpress	array assay	P-GSE40085-5	ArrayExpress	GSM984786_wt-normal4.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.raw.1.zip	P-GSE40085-1	ArrayExpress	GSM984786_sample_table.txt norm	GSM984786_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.processed.1.zip	wild-type
GSM984785 1	wild-type 3	mouse liver, wild-type	wild-type mouse liver, biological rep3	3-3.5 months	wild-type	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	liver	EFO	http://purl.obolibrary.org/obo/UBERON_0002107	male	EFO	http://purl.obolibrary.org/obo/PATO_0000384	C57BL/6	EFO	EFO_0004472	P-GSE40085-2	ArrayExpress	GSM984785 extract 1	total RNA	P-GSE40085-3	ArrayExpress	GSM984785 LE 1	biotin	P-GSE40085-4	ArrayExpress	GSM984785	A-GEOD-14661	ArrayExpress	array assay	P-GSE40085-5	ArrayExpress	GSM984785_wt-normal3.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.raw.1.zip	P-GSE40085-1	ArrayExpress	GSM984785_sample_table.txt norm	GSM984785_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.processed.1.zip	wild-type
GSM984784 1	wild-type 2	mouse liver, wild-type	wild-type mouse liver, biological rep2	3-3.5 months	wild-type	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	liver	EFO	http://purl.obolibrary.org/obo/UBERON_0002107	male	EFO	http://purl.obolibrary.org/obo/PATO_0000384	C57BL/6	EFO	EFO_0004472	P-GSE40085-2	ArrayExpress	GSM984784 extract 1	total RNA	P-GSE40085-3	ArrayExpress	GSM984784 LE 1	biotin	P-GSE40085-4	ArrayExpress	GSM984784	A-GEOD-14661	ArrayExpress	array assay	P-GSE40085-5	ArrayExpress	GSM984784_wt-normal2.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.raw.1.zip	P-GSE40085-1	ArrayExpress	GSM984784_sample_table.txt norm	GSM984784_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.processed.1.zip	wild-type
GSM984783 1	wild-type 1	mouse liver, wild-type	wild-type mouse liver, biological rep1	3-3.5 months	wild-type	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	liver	EFO	http://purl.obolibrary.org/obo/UBERON_0002107	male	EFO	http://purl.obolibrary.org/obo/PATO_0000384	C57BL/6	EFO	EFO_0004472	P-GSE40085-2	ArrayExpress	GSM984783 extract 1	total RNA	P-GSE40085-3	ArrayExpress	GSM984783 LE 1	biotin	P-GSE40085-4	ArrayExpress	GSM984783	A-GEOD-14661	ArrayExpress	array assay	P-GSE40085-5	ArrayExpress	GSM984783_wt-normal1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.raw.1.zip	P-GSE40085-1	ArrayExpress	GSM984783_sample_table.txt norm	GSM984783_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-40085/E-GEOD-40085.processed.1.zip	wild-type