Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [Organism]	Term Source REF	Term Accession Number	Characteristics [organism part]	Term Source REF	Term Accession Number	Characteristics [variation]	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [ORGANISM PART]	Term Source REF	Term Accession Number	FactorValue [VARIATION]
GSM865319 1	SAMPLE 8	mouse embyro from implantation site	exp_c_WT	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	implantation site	  	  	WT	P-GSE35299-2	ArrayExpress	GSM865319 extract 1	polyA RNA	P-GSE35299-3	ArrayExpress	GSM865319 LE 1	biotin	P-GSE35299-4	ArrayExpress	GSM865319	A-AFFY-45	ArrayExpress	array assay	P-GSE35299-5	ArrayExpress	P-GSE35299-6	ArrayExpress	GSM865319_exp_c_WT.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.raw.1.zip	P-GSE35299-1	ArrayExpress	GSM865319_sample_table.txt norm	GSM865319_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.processed.1.zip	implantation site	  	  	WT
GSM865318 1	SAMPLE 7	mouse embyro from implantation site	exp_c_KO	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	implantation site	  	  	KO	P-GSE35299-2	ArrayExpress	GSM865318 extract 1	polyA RNA	P-GSE35299-3	ArrayExpress	GSM865318 LE 1	biotin	P-GSE35299-4	ArrayExpress	GSM865318	A-AFFY-45	ArrayExpress	array assay	P-GSE35299-5	ArrayExpress	P-GSE35299-6	ArrayExpress	GSM865318_exp_c_KO.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.raw.1.zip	P-GSE35299-1	ArrayExpress	GSM865318_sample_table.txt norm	GSM865318_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.processed.1.zip	implantation site	  	  	KO
GSM865317 1	SAMPLE 6	mouse blastocyst	exp_b_WT2	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	blastocyst	EFO	EFO_0000295	WT	P-GSE35299-2	ArrayExpress	GSM865317 extract 1	polyA RNA	P-GSE35299-3	ArrayExpress	GSM865317 LE 1	biotin	P-GSE35299-4	ArrayExpress	GSM865317	A-AFFY-45	ArrayExpress	array assay	P-GSE35299-5	ArrayExpress	P-GSE35299-6	ArrayExpress	GSM865317_exp_b_WT2.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.raw.1.zip	P-GSE35299-1	ArrayExpress	GSM865317_sample_table.txt norm	GSM865317_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.processed.1.zip	blastocyst	EFO	EFO_0000295	WT
GSM865316 1	SAMPLE 5	mouse blastocyst	exp_b_WT1	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	blastocyst	EFO	EFO_0000295	WT	P-GSE35299-2	ArrayExpress	GSM865316 extract 1	polyA RNA	P-GSE35299-3	ArrayExpress	GSM865316 LE 1	biotin	P-GSE35299-4	ArrayExpress	GSM865316	A-AFFY-45	ArrayExpress	array assay	P-GSE35299-5	ArrayExpress	P-GSE35299-6	ArrayExpress	GSM865316_exp_b_WT1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.raw.1.zip	P-GSE35299-1	ArrayExpress	GSM865316_sample_table.txt norm	GSM865316_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.processed.1.zip	blastocyst	EFO	EFO_0000295	WT
GSM865315 1	SAMPLE 4	mouse blastocyst	exp_b_KO2	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	blastocyst	EFO	EFO_0000295	KO	P-GSE35299-2	ArrayExpress	GSM865315 extract 1	polyA RNA	P-GSE35299-3	ArrayExpress	GSM865315 LE 1	biotin	P-GSE35299-4	ArrayExpress	GSM865315	A-AFFY-45	ArrayExpress	array assay	P-GSE35299-5	ArrayExpress	P-GSE35299-6	ArrayExpress	GSM865315_exp_b_KO2.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.raw.1.zip	P-GSE35299-1	ArrayExpress	GSM865315_sample_table.txt norm	GSM865315_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.processed.1.zip	blastocyst	EFO	EFO_0000295	KO
GSM865314 1	SAMPLE 3	mouse blastocyst	exp_b_KO1	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	blastocyst	EFO	EFO_0000295	KO	P-GSE35299-2	ArrayExpress	GSM865314 extract 1	polyA RNA	P-GSE35299-3	ArrayExpress	GSM865314 LE 1	biotin	P-GSE35299-4	ArrayExpress	GSM865314	A-AFFY-45	ArrayExpress	array assay	P-GSE35299-5	ArrayExpress	P-GSE35299-6	ArrayExpress	GSM865314_exp_b_KO1.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.raw.1.zip	P-GSE35299-1	ArrayExpress	GSM865314_sample_table.txt norm	GSM865314_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.processed.1.zip	blastocyst	EFO	EFO_0000295	KO
GSM865313 1	SAMPLE 2	mouse MII oocytes	exp_a_WT	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	MII oocyte	  	  	WT	P-GSE35299-2	ArrayExpress	GSM865313 extract 1	polyA RNA	P-GSE35299-3	ArrayExpress	GSM865313 LE 1	biotin	P-GSE35299-4	ArrayExpress	GSM865313	A-AFFY-45	ArrayExpress	array assay	P-GSE35299-5	ArrayExpress	P-GSE35299-6	ArrayExpress	GSM865313_exp_a_WT.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.raw.1.zip	P-GSE35299-1	ArrayExpress	GSM865313_sample_table.txt norm	GSM865313_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.processed.1.zip	MII oocyte	  	  	WT
GSM865312 1	SAMPLE 1	mouse MII oocytes	exp_a_KO	Mus musculus	EFO	http://purl.org/obo/owl/NCBITaxon#NCBITaxon_10090	MII oocyte	  	  	KO	P-GSE35299-2	ArrayExpress	GSM865312 extract 1	polyA RNA	P-GSE35299-3	ArrayExpress	GSM865312 LE 1	biotin	P-GSE35299-4	ArrayExpress	GSM865312	A-AFFY-45	ArrayExpress	array assay	P-GSE35299-5	ArrayExpress	P-GSE35299-6	ArrayExpress	GSM865312_exp_a_KO.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.raw.1.zip	P-GSE35299-1	ArrayExpress	GSM865312_sample_table.txt norm	GSM865312_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-35299/E-GEOD-35299.processed.1.zip	MII oocyte	  	  	KO