Source Name	Comment [Sample_description]	Comment [Sample_source_name]	Comment [Sample_title]	Characteristics [genotype]	Characteristics [organism]	Term Source REF	Term Accession Number	Characteristics [strain]	Protocol REF	Term Source REF	Protocol REF	Term Source REF	Extract Name	Material Type	Protocol REF	Term Source REF	Labeled Extract Name	Label	Protocol REF	Term Source REF	Assay Name	Array Design REF	Term Source REF	Technology Type	Protocol REF	Term Source REF	Array Data File	Comment [ArrayExpress FTP file]	Protocol REF	Term Source REF	Normalization Name	Derived Array Data File	Comment [Derived ArrayExpress FTP file]	FactorValue [diet]	FactorValue [genotype]
GSM854171 1	Conventional_DCA_diet	Conventional_DCA_diet	Conventional_DCA_diet	Conventional	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	Swiss Webster	P-GSE34730-2	ArrayExpress	P-GSE34730-3	ArrayExpress	GSM854171 extract 1	total RNA	P-GSE34730-4	ArrayExpress	GSM854171 LE 1	biotin	P-GSE34730-5	ArrayExpress	GSM854171	A-AFFY-45	ArrayExpress	array assay	P-GSE34730-6	ArrayExpress	GSM854171.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.raw.1.zip	P-GSE34730-1	ArrayExpress	GSM854171_sample_table.txt norm	GSM854171_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.processed.1.zip	DCA_diet	Conventional
GSM854170 1	Conventional_cholic_acid_diet	Conventional_cholic_acid_diet	Conventional_cholic_acid_diet	Conventional	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	Swiss Webster	P-GSE34730-2	ArrayExpress	P-GSE34730-3	ArrayExpress	GSM854170 extract 1	total RNA	P-GSE34730-4	ArrayExpress	GSM854170 LE 1	biotin	P-GSE34730-5	ArrayExpress	GSM854170	A-AFFY-45	ArrayExpress	array assay	P-GSE34730-6	ArrayExpress	GSM854170.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.raw.1.zip	P-GSE34730-1	ArrayExpress	GSM854170_sample_table.txt norm	GSM854170_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.processed.1.zip	cholic_acid_diet	Conventional
GSM854169 1	Conventional_purified_diet	Conventional_purified_diet	Conventional_purified_diet	Conventional	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	Swiss Webster	P-GSE34730-2	ArrayExpress	P-GSE34730-3	ArrayExpress	GSM854169 extract 1	total RNA	P-GSE34730-4	ArrayExpress	GSM854169 LE 1	biotin	P-GSE34730-5	ArrayExpress	GSM854169	A-AFFY-45	ArrayExpress	array assay	P-GSE34730-6	ArrayExpress	GSM854169.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.raw.1.zip	P-GSE34730-1	ArrayExpress	GSM854169_sample_table.txt norm	GSM854169_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.processed.1.zip	purified_diet	Conventional
GSM854168 1	Germ-free_DCA_diet	Germ-free_DCA_diet	Germ-free_DCA_diet	Germ-free	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	Swiss Webster	P-GSE34730-2	ArrayExpress	P-GSE34730-3	ArrayExpress	GSM854168 extract 1	total RNA	P-GSE34730-4	ArrayExpress	GSM854168 LE 1	biotin	P-GSE34730-5	ArrayExpress	GSM854168	A-AFFY-45	ArrayExpress	array assay	P-GSE34730-6	ArrayExpress	GSM854168.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.raw.1.zip	P-GSE34730-1	ArrayExpress	GSM854168_sample_table.txt norm	GSM854168_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.processed.1.zip	DCA_diet	Germ-free
GSM854167 1	Germ-free_cholic_acid_diet	Germ-free_cholic_acid_diet	Germ-free_cholic_acid_diet	Germ-free	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	Swiss Webster	P-GSE34730-2	ArrayExpress	P-GSE34730-3	ArrayExpress	GSM854167 extract 1	total RNA	P-GSE34730-4	ArrayExpress	GSM854167 LE 1	biotin	P-GSE34730-5	ArrayExpress	GSM854167	A-AFFY-45	ArrayExpress	array assay	P-GSE34730-6	ArrayExpress	GSM854167.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.raw.1.zip	P-GSE34730-1	ArrayExpress	GSM854167_sample_table.txt norm	GSM854167_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.processed.1.zip	cholic_acid_diet	Germ-free
GSM854166 1	Germ-free_purified_diet	Germ-free_purified_diet	Germ-free_purified_diet	Germ-free	Mus musculus	EFO	http://purl.obolibrary.org/obo/NCBITaxon_10090	Swiss Webster	P-GSE34730-2	ArrayExpress	P-GSE34730-3	ArrayExpress	GSM854166 extract 1	total RNA	P-GSE34730-4	ArrayExpress	GSM854166 LE 1	biotin	P-GSE34730-5	ArrayExpress	GSM854166	A-AFFY-45	ArrayExpress	array assay	P-GSE34730-6	ArrayExpress	GSM854166.CEL	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.raw.1.zip	P-GSE34730-1	ArrayExpress	GSM854166_sample_table.txt norm	GSM854166_sample_table.txt	ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-34730/E-GEOD-34730.processed.1.zip	purified_diet	Germ-free