Source Name Comment [Sample_source_name] Comment [Sample_title] Characteristics [cell line] Term Source REF Term Accession Number Characteristics [organism] Term Source REF Term Accession Number Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] GSM761598 1 U2OS cells Expressing Brd4 shRNA U2OScells_StablyExpressingControlshRNA_rep2 U2OS EFO EFO_0002869 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE30700-2 ArrayExpress P-GSE30700-3 ArrayExpress P-GSE30700-4 ArrayExpress GSM761598 extract 1 total RNA P-GSE30700-5 ArrayExpress GSM761598 LE 1 biotin P-GSE30700-6 ArrayExpress GSM761598 A-AFFY-37 ArrayExpress array assay P-GSE30700-7 ArrayExpress GSM761598_AA189_Bad.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-30700/E-GEOD-30700.raw.1.zip P-GSE30700-1 ArrayExpress GSM761598_sample_table.txt norm GSM761598_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-30700/E-GEOD-30700.processed.1.zip GSM761597 1 U2OS cells Expressing Brd4 shRNA U2OScells_StablyExpressingControlshRNA_rep1 U2OS EFO EFO_0002869 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE30700-2 ArrayExpress P-GSE30700-3 ArrayExpress P-GSE30700-4 ArrayExpress GSM761597 extract 1 total RNA P-GSE30700-5 ArrayExpress GSM761597 LE 1 biotin P-GSE30700-6 ArrayExpress GSM761597 A-AFFY-37 ArrayExpress array assay P-GSE30700-7 ArrayExpress GSM761597_AA187_Bad.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-30700/E-GEOD-30700.raw.1.zip P-GSE30700-1 ArrayExpress GSM761597_sample_table.txt norm GSM761597_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-30700/E-GEOD-30700.processed.1.zip GSM761596 1 U2OS cells Expressing Control shRNA U2OScells_StablyExpressingBrd4shRNA_rep2 U2OS EFO EFO_0002869 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE30700-2 ArrayExpress P-GSE30700-3 ArrayExpress P-GSE30700-4 ArrayExpress GSM761596 extract 1 total RNA P-GSE30700-5 ArrayExpress GSM761596 LE 1 biotin P-GSE30700-6 ArrayExpress GSM761596 A-AFFY-37 ArrayExpress array assay P-GSE30700-7 ArrayExpress GSM761596_AA190_SH3.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-30700/E-GEOD-30700.raw.1.zip P-GSE30700-1 ArrayExpress GSM761596_sample_table.txt norm GSM761596_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-30700/E-GEOD-30700.processed.1.zip GSM761595 1 U2OS cells Expressing Control shRNA U2OScells_StablyExpressingBrd4shRNA_rep1 U2OS EFO EFO_0002869 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE30700-2 ArrayExpress P-GSE30700-3 ArrayExpress P-GSE30700-4 ArrayExpress GSM761595 extract 1 total RNA P-GSE30700-5 ArrayExpress GSM761595 LE 1 biotin P-GSE30700-6 ArrayExpress GSM761595 A-AFFY-37 ArrayExpress array assay P-GSE30700-7 ArrayExpress GSM761595_AA188_SH3.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-30700/E-GEOD-30700.raw.1.zip P-GSE30700-1 ArrayExpress GSM761595_sample_table.txt norm GSM761595_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-30700/E-GEOD-30700.processed.1.zip