Source Name Comment [Sample_source_name] Comment [Sample_title] Characteristics [cell line] Characteristics [organism] Term Source REF Term Accession Number Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Assay Name Array Design REF Term Source REF Technology Type Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [cell line] GSM726776 1 COLO320 MSC(-) COLO 320_xenograt_with/without rat MSCs_rep1 COLO 320DM Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE29389-2 ArrayExpress P-GSE29389-3 ArrayExpress P-GSE29389-4 ArrayExpress GSM726776 extract 1 total RNA P-GSE29389-5 ArrayExpress GSM726776 LE 1 Cy5 P-GSE29389-6 ArrayExpress GSM726776 A-GEOD-5639 ArrayExpress array assay P-GSE29389-7 ArrayExpress GSM726776_EH07Y09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-29389/E-GEOD-29389.raw.1.zip P-GSE29389-1 ArrayExpress GSM726776_sample_table.txt norm GSM726776_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-29389/E-GEOD-29389.processed.1.zip COLO 320DM GSM726776 2 COLO320 MSC(+) COLO 320_xenograt_with/without rat MSCs_rep1 COLO 320DM co-implanted with 7-week old female SD-TG (CAG-EGFP) rat MSCs harvesed passage 4 Homo sapiens EFO http://purl.obolibrary.org/obo/NCBITaxon_9606 P-GSE29389-2 ArrayExpress P-GSE29389-3 ArrayExpress P-GSE29389-4 ArrayExpress GSM726776 extract 2 total RNA P-GSE29389-5 ArrayExpress GSM726776 LE 2 Cy3 P-GSE29389-6 ArrayExpress GSM726776 A-GEOD-5639 ArrayExpress array assay P-GSE29389-7 ArrayExpress GSM726776_EH07Y09.gpr ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-29389/E-GEOD-29389.raw.1.zip P-GSE29389-1 ArrayExpress GSM726776_sample_table.txt norm GSM726776_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-29389/E-GEOD-29389.processed.1.zip COLO 320DM co-implanted with 7-week old female SD-TG (CAG-EGFP) rat MSCs harvesed passage 4