Source Name Comment [Sample_description] Comment [Sample_source_name] Characteristics[Organism] Characteristics[age] Characteristics[diagnosis] Characteristics[tissue] Characteristics[sample type] Characteristics[tissue] Protocol REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Extract Name Material Type Protocol REF Term Source REF Labeled Extract Name Label Protocol REF Term Source REF Hybridization Name Array Design REF Term Source REF Protocol REF Term Source REF Protocol REF Term Source REF Array Data File Comment [ArrayExpress FTP file] Protocol REF Term Source REF Normalization Name Derived Array Data File Comment [Derived ArrayExpress FTP file] FactorValue [AGE] GSM506012 1 14_U133A SN, PD Homo sapiens N/A Parkinson's disease substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506012 extract 1 total RNA P-GSE20163-5 GSM506012 LE 1 biotin P-GSE20163-6 GSM506012 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506012.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506012_sample_table.txt norm GSM506012_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip N/A GSM506011 1 5164_U133A SN, PD Homo sapiens N/A Parkinson's disease substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506011 extract 1 total RNA P-GSE20163-5 GSM506011 LE 1 biotin P-GSE20163-6 GSM506011 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506011.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506011_sample_table.txt norm GSM506011_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip N/A GSM506010 1 4831_U133A SN, PD Homo sapiens N/A Parkinson's disease substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506010 extract 1 total RNA P-GSE20163-5 GSM506010 LE 1 biotin P-GSE20163-6 GSM506010 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506010.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506010_sample_table.txt norm GSM506010_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip N/A GSM506009 1 3059_U133A SN, PD Homo sapiens 80 Parkinson's disease substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506009 extract 1 total RNA P-GSE20163-5 GSM506009 LE 1 biotin P-GSE20163-6 GSM506009 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506009.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506009_sample_table.txt norm GSM506009_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 80 GSM506008 1 290_U133A SN, control Homo sapiens 71 control substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506008 extract 1 total RNA P-GSE20163-5 GSM506008 LE 1 biotin P-GSE20163-6 GSM506008 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506008.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506008_sample_table.txt norm GSM506008_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 71 GSM506007 1 287_U133A SN, control Homo sapiens 65 control substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506007 extract 1 total RNA P-GSE20163-5 GSM506007 LE 1 biotin P-GSE20163-6 GSM506007 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506007.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506007_sample_table.txt norm GSM506007_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 65 GSM506006 1 2729_U133A SN, PD Homo sapiens 80 Parkinson's disease substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506006 extract 1 total RNA P-GSE20163-5 GSM506006 LE 1 biotin P-GSE20163-6 GSM506006 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506006.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506006_sample_table.txt norm GSM506006_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 80 GSM506005 1 2721_U133A SN, PD Homo sapiens 84 Parkinson's disease substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506005 extract 1 total RNA P-GSE20163-5 GSM506005 LE 1 biotin P-GSE20163-6 GSM506005 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506005.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506005_sample_table.txt norm GSM506005_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 84 GSM506004 1 2525_U133A SN, PD Homo sapiens N/A Parkinson's disease substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506004 extract 1 total RNA P-GSE20163-5 GSM506004 LE 1 biotin P-GSE20163-6 GSM506004 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506004.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506004_sample_table.txt norm GSM506004_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip N/A GSM506003 1 252_U133A SN, control Homo sapiens 52 control substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506003 extract 1 total RNA P-GSE20163-5 GSM506003 LE 1 biotin P-GSE20163-6 GSM506003 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506003.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506003_sample_table.txt norm GSM506003_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 52 GSM506002 1 2515_U133A SN, PD Homo sapiens 70 Parkinson's disease substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506002 extract 1 total RNA P-GSE20163-5 GSM506002 LE 1 biotin P-GSE20163-6 GSM506002 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506002.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506002_sample_table.txt norm GSM506002_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 70 GSM506001 1 238_U133A SN, control Homo sapiens 84 control substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506001 extract 1 total RNA P-GSE20163-5 GSM506001 LE 1 biotin P-GSE20163-6 GSM506001 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506001.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506001_sample_table.txt norm GSM506001_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 84 GSM506000 1 223_U133A SN, control Homo sapiens 81 control substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM506000 extract 1 total RNA P-GSE20163-5 GSM506000 LE 1 biotin P-GSE20163-6 GSM506000 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM506000.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM506000_sample_table.txt norm GSM506000_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 81 GSM505999 1 222_U133A SN, control Homo sapiens 73 control substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM505999 extract 1 total RNA P-GSE20163-5 GSM505999 LE 1 biotin P-GSE20163-6 GSM505999 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM505999.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM505999_sample_table.txt norm GSM505999_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 73 GSM505998 1 204_U133A SN, control Homo sapiens 70 control substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM505998 extract 1 total RNA P-GSE20163-5 GSM505998 LE 1 biotin P-GSE20163-6 GSM505998 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM505998.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM505998_sample_table.txt norm GSM505998_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 70 GSM505997 1 178_U133A SN, control Homo sapiens N/A control substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM505997 extract 1 total RNA P-GSE20163-5 GSM505997 LE 1 biotin P-GSE20163-6 GSM505997 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM505997.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM505997_sample_table.txt norm GSM505997_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip N/A GSM505996 1 114_U133A SN, control Homo sapiens 59 control substantia nigra P-GSE20163-2 P-GSE20163-3 P-GSE20163-4 GSM505996 extract 1 total RNA P-GSE20163-5 GSM505996 LE 1 biotin P-GSE20163-6 GSM505996 A-AFFY-33 P-GSE20163-7 P-GSE20163-8 GSM505996.CEL ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.raw.1.zip P-GSE20163-1 GSM505996_sample_table.txt norm GSM505996_sample_table.txt ftp://ftp.ebi.ac.uk/pub/databases/microarray/data/experiment/GEOD/E-GEOD-20163/E-GEOD-20163.processed.1.zip 59